CNRS Nantes University US2B US2B
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Should you encounter any unexpected behaviour,
please let us know.
 elNémo has been hacked on november 27th.
It has been moved away and runs again.
**Still some additional cleaning from time to time**
Sorry for the inconvenience.


***  extreme_12  ***

Normal Mode Analysis for ID 260409131037910024

Conformational change expected to be analysed

%Projmod-Wn> Eigenvector 32 Norm= 0.9999

The following table indicates for every normal mode its frequency (black, normalized relative to the lowest mode frequency) and its collectivity (magenta). If a second structure was submitted, the cummulative overlap between the normal modes and the conformational change is computed (red). The corresponding amplitude (dq) is then also given (green). Click on the mode link to obtain a visualization of the mean square displacement <R2> of the C-alpha atoms associated to each mode.

WARNING: Rotation-translation modes have a cumulative overlap of 0.8140 !!! This probably means that the second conformation was not fitted properly onto the first one.

[HELP on collectivity] [HELP on overlap]

<R2> frequency collectivity cumulative overlap amplitude (dq)
mode 7 1.00 0.5727 0.065 41.4310
mode 8 1.01 0.5667 0.065 -5.3879
mode 9 1.16 0.6792 0.086 -19.9447
mode 10 1.44 0.4382 0.086 -6.1481
mode 11 1.60 0.6231 0.259 -65.2041
mode 12 1.63 0.3993 0.259 -0.6835
mode 13 1.69 0.6801 0.259 -0.5672
mode 14 1.75 0.6022 0.270 20.7208
mode 15 1.85 0.4852 0.357 45.2218
mode 16 2.03 0.4414 0.389 29.9196
mode 17 2.06 0.4000 0.486 48.0645
mode 18 2.10 0.5510 0.486 7.2047
mode 19 2.14 0.5315 0.497 19.6415
mode 20 2.19 0.5761 0.508 -2.7166
mode 21 2.41 0.5508 0.540 28.5498
mode 22 2.44 0.4386 0.562 -27.6607
mode 23 2.51 0.3412 0.573 8.0131
mode 24 2.61 0.6112 0.573 1.3863
mode 25 2.64 0.3145 0.573 11.6015
mode 26 2.68 0.1646 0.584 -17.4552
mode 27 2.73 0.2307 0.584 3.7065
mode 28 2.75 0.1537 0.594 18.0209
mode 29 2.83 0.3837 0.605 -7.4438
mode 30 2.86 0.2911 0.605 -7.4970
mode 31 2.95 0.5828 0.605 11.1236
mode 32 3.00 0.3277 0.605 2.3239
mode 33 3.04 0.4590 0.616 11.1592
mode 34 3.05 0.4368 0.627 -19.9669
mode 35 3.07 0.3975 0.627 3.6772
mode 36 3.11 0.2621 0.627 1.7230
mode 37 3.18 0.2155 0.638 16.4951
mode 38 3.23 0.4354 0.648 11.6849
mode 39 3.26 0.2661 0.648 8.0899
mode 40 3.28 0.3425 0.648 6.0268
mode 41 3.31 0.3574 0.648 -1.9049
mode 42 3.34 0.4233 0.659 -17.2647
mode 43 3.37 0.5665 0.670 6.2232
mode 44 3.43 0.4528 0.681 -18.3119
mode 45 3.47 0.4159 0.702 -22.2889
mode 46 3.53 0.3874 0.702 5.7528
mode 47 3.54 0.4141 0.702 -11.2615
mode 48 3.58 0.5224 0.713 -15.1540
mode 49 3.63 0.4206 0.713 4.6690
mode 50 3.65 0.4386 0.724 -17.4437
mode 51 3.69 0.4162 0.735 -15.5588
mode 52 3.72 0.3077 0.735 -6.4193
mode 53 3.75 0.4822 0.746 17.0440
mode 54 3.76 0.5370 0.757 -16.0752
mode 55 3.79 0.5135 0.767 11.1465
mode 56 3.86 0.4230 0.767 2.1525
mode 57 3.89 0.4518 0.778 13.8987
mode 58 3.93 0.4949 0.789 17.5340
mode 59 3.96 0.4327 0.789 -1.6737
mode 60 4.00 0.4739 0.789 -2.2504
mode 61 4.04 0.4235 0.789 -10.9070
mode 62 4.08 0.3767 0.789 0.0664
mode 63 4.12 0.3881 0.789 -4.1099
mode 64 4.14 0.5076 0.789 0.0784
mode 65 4.15 0.4443 0.789 7.9543
mode 66 4.19 0.1641 0.800 14.2573
mode 67 4.22 0.4050 0.811 -14.0798
mode 68 4.23 0.4976 0.811 8.1963
mode 69 4.25 0.4830 0.811 -0.2185
mode 70 4.29 0.4669 0.811 3.6844
mode 71 4.31 0.5688 0.821 12.5609
mode 72 4.35 0.3644 0.821 -1.2125
mode 73 4.36 0.5022 0.821 -4.1885
mode 74 4.40 0.5072 0.821 -0.0977
mode 75 4.44 0.4947 0.821 4.1895
mode 76 4.46 0.4931 0.821 -5.3443
mode 77 4.50 0.4810 0.832 11.2272
mode 78 4.51 0.4291 0.832 14.2317
mode 79 4.54 0.5252 0.832 -3.6518
mode 80 4.55 0.5504 0.832 -0.4532
mode 81 4.59 0.5080 0.832 0.2202
mode 82 4.61 0.4840 0.832 -3.1126
mode 83 4.66 0.4934 0.843 7.3222
mode 84 4.66 0.5419 0.843 -6.6577
mode 85 4.72 0.3705 0.843 8.8601
mode 86 4.72 0.4758 0.843 -0.3580
mode 87 4.74 0.4490 0.843 -1.7198
mode 88 4.75 0.5087 0.843 3.4815
mode 89 4.76 0.5288 0.843 0.5741
mode 90 4.80 0.5596 0.843 -0.6023
mode 91 4.83 0.4984 0.843 -0.6882
mode 92 4.83 0.5364 0.843 7.3123
mode 93 4.85 0.3887 0.854 -15.4964
mode 94 4.92 0.4751 0.865 11.9995
mode 95 4.94 0.5029 0.865 4.6381
mode 96 4.96 0.3884 0.865 -2.8333
mode 97 4.98 0.5359 0.865 -3.0823
mode 98 5.01 0.5136 0.865 -7.0229
mode 99 5.03 0.4816 0.865 0.9814
mode 100 5.05 0.5312 0.865 5.3371
mode 101 5.07 0.5131 0.886 -20.2192
mode 102 5.09 0.4496 0.886 -10.4283
mode 103 5.10 0.2985 0.886 -4.1309
mode 104 5.13 0.5068 0.886 -8.2962
mode 105 5.16 0.3455 0.897 -10.2438
mode 106 5.17 0.1837 0.897 13.0010

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: december 26th, 2025.