CNRS Nantes University US2B US2B
home |  start a new run |  job status |  references&downloads |  examples |  help  

Should you encounter any unexpected behaviour,
please let us know.
elNémo has been hacked on november 27th.
It has been moved away and runs again.
**Still some additional cleaning from time to time**
Sorry for the inconvenience.


***    ***

B-factor analysis for ID 2604121016401563743

Overall B-factor prediction

Correlation= 0.180 for 284 C-alpha atoms.

B-factors for all residues

Residue-by-residue B-factor prediction for CA atoms

B-factors are computed based on the first 100 normal modes (B-PREDICT) and are scaled to match the overall B-factors in the submitted model (B-SCALED). A high correlation with the observations is an indicator that the normal modes capture well the overall flexibility features of the model. Comparison of the observed (B-OBS, blue) and the computed (B-SCALED, red) B-factors for all C-alpha atoms is presented below. Differences between B-factors from normal mode analysis and from X-ray crystallographic data may for example indicate regions where the protein flexibility is modified due to external factors such as tight crystall-packing.

  ATOM TYP  RES  RESID   B-PREDICT    B-SCALED      B-OBS
B-SCALEDB-OBS
     2 CA   THR     69      0.0581    276.2444    144.1500
    16 CA   HIS     70      0.0363    190.5234    141.9300
    33 CA   LEU     71      0.0235    140.0387    135.2900
    52 CA   GLN     72      0.0189    121.9867    140.9500
    69 CA   GLU     73      0.0091     83.2680    132.7400
    84 CA   LYS     74      0.0061     71.8608    117.1000
   106 CA   ASN     75      0.0092     83.9913    115.9700
   120 CA   TRP     76      0.0084     80.5717    120.4000
   144 CA   SER     77      0.0035     61.5018     97.9200
   155 CA   ALA     78      0.0035     61.5860     94.1000
   165 CA   LEU     79      0.0060     71.3084    113.3600
   184 CA   LEU     80      0.0044     64.8291     91.0000
   203 CA   THR     81      0.0024     57.2558     95.3400
   217 CA   ALA     82      0.0034     60.8644     94.9000
   227 CA   VAL     83      0.0040     63.2586     96.6200
   243 CA   VAL     84      0.0023     56.8320     86.2700
   259 CA   ILE     85      0.0021     56.1210     85.4300
   278 CA   ILE     86      0.0035     61.3817     91.9400
   297 CA   LEU     87      0.0025     57.3218     87.9600
   316 CA   THR     88      0.0018     54.7903     83.7800
   330 CA   ILE     89      0.0022     56.2543     86.4900
   349 CA   ALA     90      0.0025     57.5510     88.0700
   359 CA   GLY     91      0.0017     54.4732     87.3300
   366 CA   ASN     92      0.0016     54.1396     75.0100
   380 CA   ILE     93      0.0024     56.9514     87.4400
   399 CA   LEU     94      0.0022     56.1561     82.8100
   418 CA   VAL     95      0.0017     54.2906     76.0000
   434 CA   ILE     96      0.0021     55.8571     76.7500
   453 CA   MET     97      0.0035     61.5298     92.1000
   470 CA   ALA     98      0.0028     58.5643    100.7700
   480 CA   VAL     99      0.0026     57.7859     93.8500
   496 CA   SER    100      0.0042     64.0050     86.0700
   507 CA   LEU    101      0.0066     73.5286     97.1700
   526 CA   GLU    102      0.0061     71.6162    107.8700
   541 CA   LYS    103      0.0133    100.0174    115.2100
   563 CA   LYS    104      0.0121     95.3927     81.8900
   585 CA   LEU    105      0.0042     64.2448     97.8500
   604 CA   GLN    106      0.0050     67.4155     94.2600
   621 CA   ASN    107      0.0034     61.1268     70.7100
   635 CA   ALA    108      0.0027     58.3336     65.8400
   645 CA   THR    109      0.0016     54.1480     63.5400
   659 CA   ASN    110      0.0017     54.4806     67.7800
   673 CA   TYR    111      0.0022     56.1806     73.1600
   694 CA   PHE    112      0.0018     54.6532     62.7900
   714 CA   LEU    113      0.0013     52.8477     64.6900
   733 CA   MET    114      0.0015     53.5672     78.7600
   750 CA   SER    115      0.0015     53.7683     65.5400
   761 CA   LEU    116      0.0013     52.8678     65.7900
   780 CA   ALA    117      0.0015     53.6429     71.1700
   790 CA   ILE    118      0.0017     54.5202     78.9300
   809 CA   ALA    119      0.0015     53.7246     76.2000
   819 CA   ASP    120      0.0014     53.2221     75.3100
   831 CA   MET    121      0.0019     54.9611     79.8400
   848 CA   LEU    122      0.0021     55.8347     80.1100
   867 CA   LEU    123      0.0016     53.8197     76.8900
   886 CA   GLY    124      0.0017     54.1888     86.1100
   893 CA   PHE    125      0.0028     58.5527     97.0500
   913 CA   LEU    126      0.0028     58.6713     74.8500
   932 CA   VAL    127      0.0018     54.8469     72.2600
   948 CA   MET    128      0.0016     53.9496     83.2500
   965 CA   PRO    129      0.0023     56.9121     93.1900
   979 CA   VAL    130      0.0024     57.1643     82.1300
   995 CA   SER    131      0.0022     56.2668     79.4000
  1006 CA   MET    132      0.0024     57.1309     85.2500
  1023 CA   LEU    133      0.0039     62.9736     88.3100
  1042 CA   THR    134      0.0032     60.2714     90.7100
  1056 CA   ILE    135      0.0035     61.2960     90.5200
  1075 CA   LEU    136      0.0046     65.7428    105.5600
  1094 CA   TYR    137      0.0069     74.9294    103.6900
  1115 CA   GLY    138      0.0083     80.1512    103.3100
  1122 CA   TYR    139      0.0045     65.4503     98.2200
  1143 CA   ARG    140      0.0063     72.4670     87.5300
  1167 CA   TRP    141      0.0046     65.6410     88.9300
  1191 CA   PRO    142      0.0062     72.0193    101.0600
  1205 CA   LEU    143      0.0081     79.3914     96.2400
  1224 CA   PRO    144      0.0107     89.6163     92.7400
  1238 CA   SER    145      0.0084     80.5589    109.4700
  1249 CA   LYS    146      0.0076     77.5550    107.1300
  1271 CA   LEU    147      0.0052     68.3197     93.4500
  1290 CA   CYS    148      0.0032     60.1124    101.5500
  1300 CA   ALA    149      0.0029     59.1622     89.0400
  1310 CA   VAL    150      0.0035     61.2898     71.5600
  1326 CA   TRP    151      0.0021     55.9340     76.1700
  1350 CA   ILE    152      0.0020     55.6777     79.7200
  1369 CA   TYR    153      0.0022     56.1954     81.4900
  1390 CA   LEU    154      0.0022     56.2074     58.6800
  1409 CA   ASP    155      0.0017     54.3405     58.2800
  1421 CA   VAL    156      0.0017     54.5344     54.1900
  1437 CA   LEU    157      0.0019     55.2693     62.7800
  1456 CA   PHE    158      0.0018     54.8032     58.0800
  1476 CA   SER    159      0.0015     53.4697     53.8400
  1487 CA   THR    160      0.0016     53.8564     55.7600
  1501 CA   ALA    161      0.0015     53.6996     49.9500
  1511 CA   LYS    162      0.0013     52.6410     41.7000
  1533 CA   ILE    163      0.0015     53.7530     34.3700
  1552 CA   TRP    164      0.0017     54.3177     39.4000
  1576 CA   HIS    165      0.0013     52.8436     41.1100
  1593 CA   LEU    166      0.0013     52.7403     43.7200
  1612 CA   CYS    167      0.0016     54.0999     40.5600
  1623 CA   ALA    168      0.0017     54.2731     34.2000
  1633 CA   ILE    169      0.0014     53.1586     21.3100
  1652 CA   SER    170      0.0015     53.5862     21.2000
  1663 CA   LEU    171      0.0023     56.8481     18.7800
  1682 CA   ASP    172      0.0026     57.9034     18.7200
  1694 CA   ARG    173      0.0024     57.0261     18.4900
  1718 CA   TYR    174      0.0027     58.3733     15.8200
  1739 CA   VAL    175      0.0065     73.4079     20.8800
  1755 CA   ALA    176      0.0070     75.0715     15.2100
  1765 CA   ILE    177      0.0057     70.1314     13.7600
  1784 CA   GLN    178      0.0084     80.5253     13.0400
  1801 CA   ASN    179      0.0211    130.6824     16.4500
  1815 CA   PRO    180      0.0312    170.3820     11.2800
  1829 CA   ILE    181      0.0284    159.3848     12.0200
  1848 CA   HIS    182      0.0155    108.4278     29.1600
  1866 CA   HIS    183      0.0165    112.4898     19.7800
  1883 CA   SER    184      0.0263    151.0335     32.9900
  1894 CA   ARG    185      0.0553    264.9480     36.6600
  1918 CA   PHE    186      0.0464    229.9269     42.8400
  1938 CA   ASN    187      0.0170    114.5672     75.5900
  1952 CA   SER    188      0.0150    106.6838     70.5400
  1963 CA   ARG    189      0.0090     83.0967     69.4700
  1987 CA   THR    190      0.0103     88.2292     77.5100
  2001 CA   LYS    191      0.0102     87.6704     68.2200
  2023 CA   ALA    192      0.0052     68.1152     62.8500
  2033 CA   PHE    193      0.0059     70.9474     63.7200
  2053 CA   LEU    194      0.0085     81.0591     44.6900
  2072 CA   LYS    195      0.0043     64.5548     48.6800
  2094 CA   ILE    196      0.0035     61.4780     43.3800
  2113 CA   ILE    197      0.0068     74.2766     47.8700
  2132 CA   ALA    198      0.0067     73.8368     51.7800
  2142 CA   VAL    199      0.0026     57.7565     59.0000
  2158 CA   TRP    200      0.0025     57.3441     50.4500
  2182 CA   THR    201      0.0052     67.9560     62.9900
  2196 CA   ILE    202      0.0043     64.4925     61.2700
  2215 CA   SER    203      0.0025     57.6359     56.6100
  2226 CA   VAL    204      0.0033     60.8376     56.5400
  2242 CA   GLY    205      0.0039     63.0379     61.9500
  2249 CA   ILE    206      0.0030     59.4658     73.9100
  2268 CA   SER    207      0.0029     59.1414     52.1300
  2279 CA   MET    208      0.0048     66.5490     86.4000
  2296 CA   PRO    209      0.0042     64.0161     83.0500
  2310 CA   ILE    210      0.0029     59.0680     78.6700
  2329 CA   PRO    211      0.0042     64.2209     88.4600
  2343 CA   VAL    212      0.0067     74.0338     89.6100
  2359 CA   PHE    213      0.0063     72.5129     94.0200
  2379 CA   GLY    214      0.0044     64.9197     94.6800
  2386 CA   LEU    215      0.0071     75.4522     98.4700
  2405 CA   GLN    216      0.0115     93.0492    104.6300
  2422 CA   ASP    217      0.0091     83.4217     99.4200
  2434 CA   ASP    218      0.0085     80.9681     96.9300
  2446 CA   SER    219      0.0087     81.7321    106.6000
  2457 CA   LYS    220      0.0052     68.1442     88.7500
  2479 CA   VAL    221      0.0033     60.7562     82.3100
  2495 CA   PHE    222      0.0043     64.4674     97.1400
  2515 CA   LYS    223      0.0071     75.4680     93.5300
  2537 CA   GLU    224      0.0182    119.0392    103.6800
  2552 CA   GLY    225      0.0086     81.6862    104.6100
  2559 CA   SER    226      0.0056     69.6093     94.7200
  2570 CA   CYS    227      0.0029     59.2265     86.4900
  2580 CA   LEU    228      0.0034     61.1118     85.7000
  2599 CA   LEU    229      0.0031     59.7067     75.0200
  2618 CA   ALA    230      0.0037     62.1952    105.6700
  2628 CA   ASP    231      0.0047     66.3031     90.7000
  2640 CA   ASP    232      0.0051     67.7403     72.8900
  2652 CA   ASN    233      0.0067     74.0309     89.3200
  2666 CA   PHE    234      0.0042     64.1154     75.5500
  2686 CA   VAL    235      0.0036     61.7509     63.2300
  2702 CA   LEU    236      0.0039     62.8219     65.9800
  2721 CA   ILE    237      0.0052     68.1079     68.4300
  2740 CA   GLY    238      0.0039     62.8216     52.1900
  2747 CA   SER    239      0.0027     58.3613     59.0100
  2758 CA   PHE    240      0.0034     61.2351     44.8700
  2778 CA   VAL    241      0.0031     59.7880     49.5100
  2794 CA   SER    242      0.0023     56.7807     42.4400
  2805 CA   PHE    243      0.0020     55.3579     60.0200
  2825 CA   PHE    244      0.0022     56.1819     59.1900
  2845 CA   ILE    245      0.0029     58.9307     49.3000
  2864 CA   PRO    246      0.0023     56.5527     42.1700
  2878 CA   LEU    247      0.0020     55.5166     44.3400
  2897 CA   THR    248      0.0026     58.0212     54.1600
  2911 CA   ILE    249      0.0027     58.3891     23.0400
  2930 CA   MET    250      0.0020     55.3637     30.9200
  2947 CA   VAL    251      0.0027     58.3544     34.9800
  2963 CA   ILE    252      0.0040     63.5569     38.4300
  2982 CA   THR    253      0.0027     58.1434     18.1000
  2996 CA   TYR    254      0.0021     56.0083     18.8900
  3017 CA   PHE    255      0.0038     62.5188     34.6600
  3037 CA   LEU    256      0.0043     64.4533     24.6800
  3056 CA   THR    257      0.0030     59.3377     27.5100
  3070 CA   ILE    258      0.0039     62.9070     23.5200
  3089 CA   LYS    259      0.0078     78.4579     15.4400
  3111 CA   SER    260      0.0065     73.1889     19.0600
  3122 CA   LEU    261      0.0058     70.4331     14.8800
  3141 CA   GLN    262      0.0103     88.2113     14.2600
  3158 CA   LYS    263      0.0180    118.6349     27.5400
  3180 CA   GLU    264      0.0136    101.2197     12.3300
  3195 CA   ALA    265      0.0288    160.9639     12.5800
  3205 CA   GLN    313      0.0385    199.1680     28.0700
  3222 CA   SER    314      0.0227    137.0691     24.6200
  3233 CA   ILE    315      0.0109     90.5077     22.9000
  3252 CA   SER    316      0.0132     99.7531     27.8700
  3263 CA   ASN    317      0.0115     93.0586     32.5900
  3277 CA   GLU    318      0.0062     71.9400     28.6600
  3292 CA   GLN    319      0.0049     66.8403     16.7800
  3309 CA   LYS    320      0.0048     66.7412     26.5700
  3331 CA   ALA    321      0.0031     59.9928     23.2300
  3341 CA   CYS    322      0.0024     57.0463     19.4900
  3352 CA   LYS    323      0.0027     58.3681     20.6600
  3374 CA   VAL    324      0.0026     57.9708     33.6100
  3390 CA   LEU    325      0.0015     53.6074     34.4300
  3409 CA   GLY    326      0.0016     53.9878     38.5900
  3416 CA   ILE    327      0.0019     55.2456     43.8000
  3435 CA   VAL    328      0.0016     53.8517     44.8600
  3451 CA   PHE    329      0.0013     52.9108     50.6200
  3471 CA   PHE    330      0.0016     54.0112     43.7600
  3491 CA   LEU    331      0.0016     53.9967     49.7200
  3510 CA   PHE    332      0.0014     53.0312     46.8200
  3530 CA   VAL    333      0.0016     53.8394     46.0400
  3546 CA   VAL    334      0.0019     55.1979     43.8800
  3562 CA   MET    335      0.0016     54.0829     58.0300
  3579 CA   TRP    336      0.0016     53.9759     55.6100
  3603 CA   CYS    337      0.0019     55.2167     59.8900
  3614 CA   PRO    338      0.0020     55.7187     65.6100
  3628 CA   PHE    339      0.0019     55.2132     65.9400
  3648 CA   PHE    340      0.0018     54.8449     68.8100
  3668 CA   ILE    341      0.0024     56.9978     70.1700
  3687 CA   THR    342      0.0026     58.0581     74.0700
  3701 CA   ASN    343      0.0026     57.7310     78.2800
  3715 CA   ILE    344      0.0026     57.9872     77.8600
  3734 CA   MET    345      0.0043     64.6105     90.1500
  3751 CA   ALA    346      0.0044     64.8276     99.4200
  3761 CA   VAL    347      0.0051     67.6089     92.0600
  3777 CA   ILE    348      0.0076     77.6151     95.5200
  3796 CA   CYS    349      0.0117     93.6136    144.2300
  3806 CA   LYS    350      0.0135    100.6577    136.1900
  3828 CA   GLU    351      0.0344    182.8635    154.9200
  3843 CA   SER    352      0.0389    200.5308    159.7700
  3854 CA   CYS    353      0.0181    118.7399    152.8300
  3864 CA   ASN    354      0.0212    131.0239    149.6000
  3878 CA   GLU    355      0.0134    100.3285    138.2600
  3893 CA   ASP    356      0.0232    139.0559    126.8800
  3905 CA   VAL    357      0.0159    110.0761    116.6100
  3921 CA   ILE    358      0.0074     76.9111     97.3600
  3940 CA   GLY    359      0.0078     78.3703     95.2400
  3947 CA   ALA    360      0.0079     78.8607     92.2700
  3957 CA   LEU    361      0.0045     65.2592     95.3900
  3976 CA   LEU    362      0.0032     60.4433     83.3900
  3995 CA   ASN    363      0.0030     59.3539     94.1600
  4009 CA   VAL    364      0.0026     58.0249     79.5200
  4025 CA   PHE    365      0.0021     55.8394     88.6500
  4045 CA   VAL    366      0.0019     55.2938     78.0300
  4061 CA   TRP    367      0.0014     53.0787     75.6700
  4085 CA   ILE    368      0.0016     53.8493     72.6500
  4104 CA   GLY    369      0.0015     53.7222     67.3200
  4111 CA   TYR    370      0.0013     52.9435     72.7200
  4132 CA   LEU    371      0.0014     53.2905     75.4900
  4151 CA   SER    372      0.0015     53.4628     65.0800
  4162 CA   SER    373      0.0013     52.9195     69.4800
  4173 CA   ALA    374      0.0014     53.2541     70.4000
  4183 CA   VAL    375      0.0014     53.1445     67.5000
  4199 CA   ASN    376      0.0013     52.6842     81.6900
  4213 CA   PRO    377      0.0014     53.2604     70.7200
  4227 CA   LEU    378      0.0019     55.2314     74.2900
  4246 CA   VAL    379      0.0020     55.6073     70.9600
  4262 CA   TYR    380      0.0017     54.5450     72.9700
  4283 CA   THR    381      0.0025     57.5430     87.0400
  4297 CA   LEU    382      0.0039     62.9294     79.7800
  4316 CA   PHE    383      0.0035     61.2892     82.4100
  4336 CA   ASN    384      0.0034     61.1778     89.8600
  4350 CA   LYS    385      0.0066     73.7556    101.1700
  4372 CA   THR    386      0.0054     68.9753    101.8000
  4386 CA   TYR    387      0.0024     57.1891    102.6700
  4407 CA   ARG    388      0.0033     60.4637    105.6600
  4431 CA   SER    389      0.0050     67.2057    119.8200
  4442 CA   ALA    390      0.0039     63.0984    103.1800
  4452 CA   PHE    391      0.0030     59.4152     97.5100
  4472 CA   SER    392      0.0050     67.4060    109.3500
  4483 CA   ARG    393      0.0076     77.7106    130.1600
  4507 CA   TYR    394      0.0064     72.8471    112.3100
  4528 CA   ILE    395      0.0110     90.9491    115.3000
  4547 CA   GLN    396      0.0178    117.6452    134.1600
  4564 CA   CYS    397      0.0219    133.6575    109.4100
  4575 CA   GLN    398      0.0216    132.7470    133.4100
  4592 CA   TYR    399      0.0218    133.3300    117.8000

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: december 26th, 2025.