CNRS Nantes University US2B US2B
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elNémo has been hacked on november 27th.
It has been moved away and runs again.
**Still some additional cleaning from time to time**
Sorry for the inconvenience.


***  APOPTOSIS 16-FEB-19 6O0L  ***

B-factor analysis for ID 2604130126391687724

Overall B-factor prediction

Correlation= 0.573 for 279 C-alpha atoms.

B-factors for all residues

Residue-by-residue B-factor prediction for CA atoms

B-factors are computed based on the first 100 normal modes (B-PREDICT) and are scaled to match the overall B-factors in the submitted model (B-SCALED). A high correlation with the observations is an indicator that the normal modes capture well the overall flexibility features of the model. Comparison of the observed (B-OBS, blue) and the computed (B-SCALED, red) B-factors for all C-alpha atoms is presented below. Differences between B-factors from normal mode analysis and from X-ray crystallographic data may for example indicate regions where the protein flexibility is modified due to external factors such as tight crystall-packing.

  ATOM TYP  RES  RESID   B-PREDICT    B-SCALED      B-OBS
B-SCALEDB-OBS
     2 CA   TYR      9      0.0490     51.1973     59.3400
    14 CA   ASP     10      0.0441     47.6358     38.9700
    22 CA   ASN     11      0.0243     33.3888     37.2700
    30 CA   ARG     12      0.0312     38.3422     34.3200
    41 CA   GLU     13      0.0341     40.4445     37.6200
    50 CA   ILE     14      0.0201     30.3506     26.8800
    58 CA   VAL     15      0.0151     26.7038     23.3500
    65 CA   MET     16      0.0247     33.6165     33.8800
    73 CA   LYS     17      0.0254     34.1512     28.9800
    82 CA   TYR     18      0.0150     26.6367     34.0300
    94 CA   ILE     19      0.0162     27.4962     33.0500
   102 CA   HIS     20      0.0278     35.8772     41.3700
   112 CA   TYR     21      0.0266     35.0383     39.9300
   124 CA   LYS     22      0.0198     30.1076     40.7300
   133 CA   LEU     23      0.0277     35.8057     44.2700
   141 CA   SER     24      0.0435     47.2149     51.9900
   147 CA   GLN     25      0.0435     47.1871     69.9500
   156 CA   ARG     26      0.0465     49.3981     57.1800
   167 CA   GLY     27      0.0858     77.7205     56.4800
   171 CA   TYR     28      0.0589     58.3358     62.4300
   183 CA   GLU     29      0.0627     61.0468     59.1100
   192 CA   TRP     30      0.0465     49.3757     59.8000
   206 CA   ASP     31      0.0725     68.1243     85.8500
   214 CA   ALA     32      0.0681     64.9590     78.9300
   219 CA   GLY     33      0.0487     50.9488     60.9700
   223 CA   SER     90      0.0912     81.6179     71.0800
   229 CA   GLU     91      0.0841     76.4607     78.8500
   238 CA   VAL     92      0.0603     59.3088     66.8100
   245 CA   VAL     93      0.0358     41.6229     45.1500
   252 CA   HIS     94      0.0305     37.8220     40.6900
   262 CA   LEU     95      0.0413     45.5863     53.0400
   270 CA   THR     96      0.0341     40.4587     48.9200
   277 CA   LEU     97      0.0199     30.2071     40.8800
   285 CA   ARG     98      0.0233     32.6612     40.3500
   296 CA   GLN     99      0.0354     41.3377     46.3800
   305 CA   ALA    100      0.0275     35.6539     37.0300
   310 CA   VAL    101      0.0174     28.4103     38.1100
   317 CA   ASP    102      0.0312     38.3401     50.8200
   325 CA   ASP    103      0.0475     50.0738     46.4600
   333 CA   PHE    104      0.0342     40.4837     46.2100
   344 CA   SER    105      0.0307     38.0006     49.7200
   350 CA   ARG    106      0.0716     67.4982     60.3400
   361 CA   ARG    107      0.0812     74.4328     47.6800
   372 CA   TYR    108      0.0638     61.8827     57.5300
   384 CA   ARG    109      0.0646     62.4572     68.5600
   395 CA   ARG    110      0.0942     83.7778     65.2700
   406 CA   ASP    111      0.0689     65.5213     83.8400
   414 CA   PHE    112      0.0342     40.4644     93.4200
   425 CA   ALA    113      0.0506     52.3017     71.4000
   430 CA   GLU    114      0.0617     60.3195     80.7000
   439 CA   MET    115      0.0373     42.7694     72.4800
   447 CA   SER    116      0.0341     40.3985     77.4200
   453 CA   SER    117      0.0557     55.9848     87.6700
   459 CA   GLN    118      0.0543     55.0135     96.8100
   468 CA   LEU    119      0.0350     41.0799     68.1400
   476 CA   HIS    120      0.0496     51.6035     60.6000
   486 CA   LEU    121      0.0335     39.9678     54.2600
   494 CA   THR    122      0.0474     49.9992     49.0400
   501 CA   PRO    123      0.0552     55.6567     56.7500
   508 CA   PHE    124      0.0529     54.0036     66.7900
   519 CA   THR    125      0.0332     39.7981     43.1200
   526 CA   ALA    126      0.0271     35.3776     37.7000
   531 CA   ARG    127      0.0239     33.0486     40.2200
   542 CA   GLY    128      0.0285     36.3906     38.3600
   546 CA   ARG    129      0.0226     32.1661     43.6500
   557 CA   PHE    130      0.0162     27.4848     31.4100
   568 CA   ALA    131      0.0181     28.9076     40.4300
   573 CA   THR    132      0.0220     31.6758     31.3300
   580 CA   VAL    133      0.0175     28.4524     34.0600
   587 CA   VAL    134      0.0146     26.3938     22.7500
   594 CA   GLU    135      0.0186     29.2852     38.5200
   603 CA   GLU    136      0.0347     40.8286     42.0400
   612 CA   LEU    137      0.0224     31.9612     32.2000
   620 CA   PHE    138      0.0267     35.1008     29.9600
   631 CA   ARG    139      0.0458     48.8876     40.1400
   642 CA   ASP    140      0.0953     84.5974     61.9400
   650 CA   GLY    141      0.0880     79.2869     50.4100
   654 CA   VAL    142      0.0371     42.5795     38.5600
   661 CA   ASN    143      0.0367     42.3260     31.1500
   669 CA   TRP    144      0.0261     34.6535     35.1700
   683 CA   GLY    145      0.0276     35.7713     26.9600
   687 CA   ARG    146      0.0206     30.7042     28.0700
   698 CA   ILE    147      0.0132     25.3729     27.4100
   706 CA   VAL    148      0.0117     24.2596     29.4800
   713 CA   ALA    149      0.0123     24.6718     28.5800
   718 CA   PHE    150      0.0076     21.3153     28.3400
   729 CA   PHE    151      0.0056     19.9069     34.1300
   740 CA   GLU    152      0.0074     21.1372     36.1600
   749 CA   PHE    153      0.0074     21.1472     34.8600
   760 CA   GLY    154      0.0077     21.4036     29.5600
   764 CA   GLY    155      0.0084     21.8962     27.8700
   768 CA   VAL    156      0.0119     24.4402     36.2700
   775 CA   MET    157      0.0126     24.9207     35.7600
   783 CA   CYS    158      0.0162     27.5224     30.1200
   789 CA   VAL    159      0.0207     30.7467     30.9600
   796 CA   GLU    160      0.0254     34.1534     34.6600
   805 CA   SER    161      0.0275     35.6428     33.5400
   811 CA   VAL    162      0.0384     43.5178     42.3100
   818 CA   ASN    163      0.0503     52.1368     51.8800
   826 CA   ARG    164      0.0556     55.9649     53.0800
   837 CA   GLU    165      0.0768     71.2076     42.0400
   846 CA   MET    166      0.0456     48.7119     44.9600
   854 CA   SER    167      0.0431     46.9532     44.0600
   860 CA   PRO    168      0.0508     52.4761     35.1100
   867 CA   LEU    169      0.0323     39.1090     36.3400
   875 CA   VAL    170      0.0255     34.1925     29.2200
   882 CA   ASP    171      0.0349     41.0150     34.5600
   890 CA   ASN    172      0.0303     37.6726     32.5000
   898 CA   ILE    173      0.0180     28.8051     24.3600
   906 CA   ALA    174      0.0195     29.8743     26.9700
   911 CA   LEU    175      0.0258     34.4655     28.8300
   919 CA   TRP    176      0.0182     28.9750     24.1500
   933 CA   MET    177      0.0126     24.9039     26.3100
   941 CA   THR    178      0.0189     29.4641     25.1500
   948 CA   GLU    179      0.0223     31.9014     31.8000
   957 CA   TYR    180      0.0164     27.6832     33.0500
   969 CA   LEU    181      0.0155     27.0070     27.9600
   977 CA   ASN    182      0.0270     35.2994     24.2400
   985 CA   ARG    183      0.0324     39.1927     37.2200
   996 CA   HIS    184      0.0244     33.4558     41.3100
  1006 CA   LEU    185      0.0215     31.3673     27.8200
  1014 CA   HIS    186      0.0370     42.4960     45.5200
  1024 CA   THR    187      0.0587     58.1702     36.1400
  1031 CA   TRP    188      0.0454     48.6023     38.3100
  1045 CA   ILE    189      0.0332     39.8088     29.9400
  1053 CA   GLN    190      0.0587     58.1398     33.9400
  1062 CA   ASP    191      0.0853     77.3523     35.1500
  1070 CA   ASN    192      0.0622     60.6889     25.2000
  1078 CA   GLY    193      0.0647     62.5326     32.5000
  1082 CA   GLY    194      0.0432     46.9935     24.9600
  1086 CA   TRP    195      0.0335     40.0113     38.7400
  1100 CA   ASP    196      0.0593     58.5993     41.5500
  1108 CA   ALA    197      0.0563     56.4735     32.2300
  1113 CA   PHE    198      0.0368     42.3727     25.3900
  1124 CA   VAL    199      0.0456     48.6892     35.4400
  1131 CA   GLU    200      0.0915     81.7904     51.3600
  1140 CA   LEU    201      0.0832     75.8571     53.9700
  1148 CA   TYR    202      0.0640     62.0189     49.8200
  1160 CA   GLY    203      0.0716     67.4598     71.5500
  1164 CA   GLY      8      0.1579    129.7186     77.0500
  1168 CA   TYR      9      0.0556     55.9591     69.6200
  1180 CA   ASP     10      0.0425     46.4944     40.5100
  1188 CA   ASN     11      0.0255     34.2291     30.3500
  1196 CA   ARG     12      0.0328     39.5208     33.9000
  1207 CA   GLU     13      0.0322     39.0252     30.9000
  1216 CA   ILE     14      0.0172     28.2181     28.6500
  1224 CA   VAL     15      0.0133     25.4470     25.5500
  1231 CA   MET     16      0.0227     32.2025     35.0100
  1239 CA   LYS     17      0.0240     33.1246     30.1500
  1248 CA   TYR     18      0.0129     25.1181     32.4000
  1260 CA   ILE     19      0.0136     25.6581     31.0700
  1268 CA   HIS     20      0.0230     32.4231     37.5800
  1278 CA   TYR     21      0.0230     32.4252     47.0600
  1290 CA   LYS     22      0.0183     29.0103     39.1200
  1299 CA   LEU     23      0.0218     31.5357     43.3400
  1307 CA   SER     24      0.0310     38.2058     49.6400
  1313 CA   GLN     25      0.0345     40.7449     71.1400
  1322 CA   ARG     26      0.0306     37.8817     62.9600
  1333 CA   GLY     27      0.0346     40.8219     65.7700
  1337 CA   TYR     28      0.0339     40.2585     63.9700
  1349 CA   GLU     29      0.0373     42.7417     62.3700
  1358 CA   TRP     30      0.0335     39.9954     58.9700
  1372 CA   ASP     31      0.0509     52.5621     89.3000
  1380 CA   ALA     32      0.0528     53.9250     62.7600
  1385 CA   GLY     33      0.0402     44.8410     62.1200
  1389 CA   SER     90      0.0829     75.6028     85.5400
  1395 CA   GLU     91      0.0775     71.7273     78.0300
  1404 CA   VAL     92      0.0603     59.3509     64.5300
  1411 CA   VAL     93      0.0359     41.6924     41.7500
  1418 CA   HIS     94      0.0295     37.1320     42.0300
  1428 CA   LEU     95      0.0430     46.8256     52.1500
  1436 CA   THR     96      0.0359     41.6971     50.0000
  1443 CA   LEU     97      0.0203     30.4967     34.3700
  1451 CA   ARG     98      0.0250     33.8597     51.0400
  1462 CA   GLN     99      0.0395     44.3429     54.0300
  1471 CA   ALA    100      0.0302     37.6203     31.1300
  1476 CA   VAL    101      0.0209     30.9034     36.0500
  1483 CA   ASP    102      0.0369     42.4665     44.3800
  1491 CA   ASP    103      0.0537     54.5347     43.3700
  1499 CA   PHE    104      0.0395     44.3171     38.4300
  1510 CA   SER    105      0.0401     44.7671     51.3000
  1516 CA   ARG    106      0.0862     78.0152     53.4100
  1527 CA   ARG    107      0.0918     82.0718     54.5000
  1538 CA   TYR    108      0.0725     68.1547     59.2800
  1550 CA   ARG    109      0.0871     78.6236     68.2700
  1561 CA   ARG    110      0.1045     91.1973     79.0200
  1572 CA   ASP    111      0.0727     68.2563     94.7300
  1580 CA   PHE    112      0.0404     44.9807     88.5200
  1591 CA   ALA    113      0.0624     60.8562     78.0000
  1596 CA   GLU    114      0.0717     67.5559     89.8400
  1605 CA   MET    115      0.0430     46.8616     79.3800
  1613 CA   SER    116      0.0398     44.5143     86.1800
  1619 CA   SER    117      0.0598     58.9755     97.0900
  1625 CA   GLN    118      0.0585     58.0607     87.9700
  1634 CA   LEU    119      0.0376     42.9356     74.5900
  1642 CA   HIS    120      0.0465     49.3406     67.5800
  1652 CA   LEU    121      0.0332     39.7608     45.6800
  1660 CA   THR    122      0.0448     48.1590     51.0900
  1667 CA   PRO    123      0.0512     52.7776     57.2600
  1674 CA   PHE    124      0.1033     90.3411     62.2800
  1685 CA   THR    125      0.0613     60.0566     43.2900
  1692 CA   ALA    126      0.0380     43.2422     33.0000
  1697 CA   ARG    127      0.0369     42.4816     41.7600
  1708 CA   GLY    128      0.0480     50.4352     34.9800
  1712 CA   ARG    129      0.0369     42.4345     46.0400
  1723 CA   PHE    130      0.0251     33.9409     38.6200
  1734 CA   ALA    131      0.0328     39.4588     36.1900
  1739 CA   THR    132      0.0517     53.1535     41.4500
  1746 CA   VAL    133      0.0361     41.8972     42.1800
  1753 CA   VAL    134      0.0244     33.4365     24.9600
  1760 CA   GLU    135      0.0463     49.2164     35.4200
  1769 CA   GLU    136      0.0629     61.1903     46.1800
  1778 CA   LEU    137      0.0393     44.1544     35.6300
  1786 CA   PHE    138      0.0423     46.3512     35.5100
  1797 CA   ARG    139      0.0802     73.6925     43.0100
  1808 CA   ASP    140      0.1204    102.6422     60.5900
  1816 CA   GLY    141      0.1005     88.3105     50.6500
  1820 CA   VAL    142      0.0433     47.0449     43.4600
  1827 CA   ASN    143      0.0425     46.4897     38.0800
  1835 CA   TRP    144      0.0295     37.1089     29.8700
  1849 CA   GLY    145      0.0343     40.5867     27.2300
  1853 CA   ARG    146      0.0278     35.8547     27.9500
  1864 CA   ILE    147      0.0151     26.6911     20.9100
  1872 CA   VAL    148      0.0140     25.9005     28.0000
  1879 CA   ALA    149      0.0162     27.5490     33.2800
  1884 CA   PHE    150      0.0097     22.8187     21.1900
  1895 CA   PHE    151      0.0071     20.9604     32.3700
  1906 CA   GLU    152      0.0113     24.0126     38.5400
  1915 CA   PHE    153      0.0123     24.7373     33.7000
  1926 CA   GLY    154      0.0096     22.7939     27.4100
  1930 CA   GLY    155      0.0112     23.8942     26.4000
  1934 CA   VAL    156      0.0162     27.5185     37.4700
  1941 CA   MET    157      0.0159     27.3084     41.9600
  1949 CA   CYS    158      0.0158     27.2304     30.9000
  1955 CA   VAL    159      0.0192     29.6953     34.7600
  1962 CA   GLU    160      0.0216     31.4044     39.2200
  1971 CA   SER    161      0.0218     31.5588     37.9800
  1977 CA   VAL    162      0.0227     32.1833     36.7500
  1984 CA   ASN    163      0.0226     32.1486     49.3500
  1992 CA   ARG    164      0.0219     31.6267     43.5600
  2003 CA   GLU    165      0.0218     31.5284     48.1900
  2012 CA   MET    166      0.0262     34.7210     32.5200
  2020 CA   SER    167      0.0252     34.0214     39.5400
  2026 CA   PRO    168      0.0312     38.3405     31.5000
  2033 CA   LEU    169      0.0259     34.5339     33.0300
  2041 CA   VAL    170      0.0208     30.8521     32.3500
  2048 CA   ASP    171      0.0276     35.7403     40.1300
  2056 CA   ASN    172      0.0284     36.3452     26.0100
  2064 CA   ILE    173      0.0179     28.7753     24.0800
  2072 CA   ALA    174      0.0181     28.8951     25.7900
  2077 CA   LEU    175      0.0263     34.7949     24.4200
  2085 CA   TRP    176      0.0202     30.4065     26.6000
  2099 CA   MET    177      0.0129     25.1521     29.9700
  2107 CA   THR    178      0.0217     31.4852     25.8600
  2114 CA   GLU    179      0.0316     38.6274     30.8700
  2123 CA   TYR    180      0.0226     32.1293     34.2800
  2135 CA   LEU    181      0.0185     29.2100     32.6100
  2143 CA   ASN    182      0.0384     43.5400     27.5600
  2151 CA   ARG    183      0.0535     54.4009     37.2500
  2162 CA   HIS    184      0.0427     46.6047     39.4500
  2172 CA   LEU    185      0.0295     37.1172     34.9700
  2180 CA   HIS    186      0.0439     47.5001     40.6600
  2190 CA   THR    187      0.0657     63.2457     41.0800
  2197 CA   TRP    188      0.0501     51.9376     34.3500
  2211 CA   ILE    189      0.0371     42.6094     30.1300
  2219 CA   GLN    190      0.0660     63.4185     32.2800
  2228 CA   ASP    191      0.0928     82.7496     36.9400
  2236 CA   ASN    192      0.0676     64.6086     29.2400
  2244 CA   GLY    193      0.0712     67.1740     33.3700
  2248 CA   GLY    194      0.0462     49.1779     33.5700
  2252 CA   TRP    195      0.0350     41.0746     34.4000
  2266 CA   ASP    196      0.0629     61.1802     45.1100
  2274 CA   ALA    197      0.0613     60.0105     41.1900
  2279 CA   PHE    198      0.0396     44.4164     29.1900
  2290 CA   VAL    199      0.0499     51.8277     39.8800
  2297 CA   GLU    200      0.0994     87.5250     51.4100
  2306 CA   LEU    201      0.0916     81.8846     52.1100
  2314 CA   TYR    202      0.0726     68.1778     60.0300
  2326 CA   GLY    203      0.0817     74.7618     82.0300

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: december 26th, 2025.