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elNémo has been hacked on november 27th.
It has been moved away and runs again.
**Still some additional cleaning from time to time**
Sorry for the inconvenience.


***  APOPTOSIS 10-DEC-22 8HOG  ***

B-factor analysis for ID 2604130131011690572

Overall B-factor prediction

Correlation= 0.326 for 145 C-alpha atoms.

B-factors for all residues

Residue-by-residue B-factor prediction for CA atoms

B-factors are computed based on the first 100 normal modes (B-PREDICT) and are scaled to match the overall B-factors in the submitted model (B-SCALED). A high correlation with the observations is an indicator that the normal modes capture well the overall flexibility features of the model. Comparison of the observed (B-OBS, blue) and the computed (B-SCALED, red) B-factors for all C-alpha atoms is presented below. Differences between B-factors from normal mode analysis and from X-ray crystallographic data may for example indicate regions where the protein flexibility is modified due to external factors such as tight crystall-packing.

  ATOM TYP  RES  RESID   B-PREDICT    B-SCALED      B-OBS
B-SCALEDB-OBS
     2 CA   TYR      9      0.0236     40.3850     68.0900
    14 CA   ASP     10      0.0276     42.7980     67.1400
    22 CA   ASN     11      0.0117     33.1095     57.9400
    30 CA   ARG     12      0.0146     34.8475     59.1800
    41 CA   GLU     13      0.0142     34.6320     45.9400
    50 CA   ILE     14      0.0081     30.9107     44.7600
    58 CA   VAL     15      0.0071     30.3001     41.9800
    65 CA   MET     16      0.0086     31.2139     42.1300
    73 CA   LYS     17      0.0088     31.3362     36.7300
    82 CA   TYR     18      0.0059     29.5844     35.4400
    94 CA   ILE     19      0.0062     29.7544     28.1300
   102 CA   HIS     20      0.0106     32.4374     43.1200
   112 CA   TYR     21      0.0108     32.5194     29.7000
   124 CA   LYS     22      0.0083     31.0041     33.1100
   133 CA   LEU     23      0.0109     32.5924     33.6400
   141 CA   SER     24      0.0219     39.2968     33.6600
   147 CA   GLN     25      0.0311     44.9363     31.9600
   156 CA   ARG     26      0.0338     46.6023     41.4900
   167 CA   GLY     27      0.0658     66.1066     41.3500
   171 CA   TYR     28      0.0248     41.0715     41.6800
   183 CA   GLU     29      0.0436     52.5294     58.3000
   192 CA   TRP     30      0.0211     38.8589     63.6400
   206 CA   ASP     31      0.0474     54.8573     74.2500
   214 CA   ALA     32      0.0319     45.4423     69.8800
   219 CA   GLY     33      0.0231     40.0399     69.5300
   223 CA   ASP     34      0.0457     53.8682     79.2900
   231 CA   ASP     35      0.0893     80.4700     79.5400
   239 CA   VAL     36      0.0493     56.0161     80.4300
   246 CA   GLU     37      0.0932     82.8312     81.1100
   255 CA   SER     90      0.0330     46.1219     69.3400
   261 CA   GLU     91      0.0339     46.6381     61.0000
   270 CA   VAL     92      0.0210     38.7520     53.4700
   277 CA   VAL     93      0.0109     32.5969     52.3200
   284 CA   HIS     94      0.0106     32.4501     46.0200
   294 CA   LEU     95      0.0169     36.2860     42.1100
   302 CA   THR     96      0.0125     33.6058     42.3200
   309 CA   LEU     97      0.0071     30.2878     36.9200
   317 CA   ARG     98      0.0100     32.0664     39.2900
   328 CA   GLN     99      0.0146     34.8689     34.7000
   337 CA   ALA    100      0.0112     32.8157     34.1900
   342 CA   GLY    101      0.0088     31.3043     25.9600
   346 CA   ASP    102      0.0131     33.9485     29.9100
   354 CA   ASP    103      0.0293     43.8129     32.0600
   362 CA   PHE    104      0.0161     35.7866     27.8400
   373 CA   SER    105      0.0165     36.0493     28.3800
   379 CA   ARG    106      0.0396     50.1488     28.5500
   390 CA   ARG    107      0.0475     54.9664     25.6200
   401 CA   TYR    108      0.0337     46.5380     29.8000
   413 CA   ARG    109      0.0491     55.8880     35.3200
   424 CA   ARG    110      0.0842     77.3307     33.2500
   435 CA   ASP    111      0.0557     59.9413     33.7900
   443 CA   PHE    112      0.0281     43.1132     37.4200
   454 CA   ALA    113      0.0601     62.6408     35.7300
   459 CA   GLU    114      0.0682     67.5833     37.0100
   468 CA   MET    115      0.0277     42.8888     38.6600
   476 CA   SER    116      0.0265     42.1002     42.2000
   482 CA   SER    117      0.0433     52.3951     48.0000
   488 CA   GLN    118      0.0468     54.5192     41.4200
   497 CA   LEU    119      0.0188     37.4016     35.2600
   505 CA   HIS    120      0.0362     48.0272     32.7200
   515 CA   LEU    121      0.0172     36.4388     28.6300
   523 CA   THR    122      0.0395     50.0356     28.5200
   530 CA   PRO    123      0.0513     57.2516     37.3800
   537 CA   PHE    124      0.0925     82.4091     36.2900
   548 CA   THR    125      0.0336     46.4771     31.1500
   555 CA   ALA    126      0.0154     35.3369     26.2700
   560 CA   ARG    127      0.0202     38.2801     35.5400
   571 CA   GLY    128      0.0259     41.7684     35.0700
   575 CA   ARG    129      0.0169     36.2449     31.8400
   586 CA   PHE    130      0.0113     32.8495     26.8100
   597 CA   ALA    131      0.0219     39.3179     31.8200
   602 CA   THR    132      0.0363     48.0899     34.8900
   609 CA   VAL    133      0.0184     37.2096     25.2400
   616 CA   VAL    134      0.0133     34.0890     27.5800
   623 CA   GLU    135      0.0282     43.1586     36.1500
   632 CA   GLU    136      0.0479     55.1867     29.7200
   641 CA   LEU    137      0.0219     39.3143     29.3300
   649 CA   PHE    138      0.0206     38.5061     32.5300
   660 CA   ARG    139      0.0806     75.1598     39.9100
   671 CA   ASP    140      0.0960     84.5097     48.5000
   679 CA   GLY    141      0.0669     66.7912     40.2300
   683 CA   VAL    142      0.0185     37.2442     39.3900
   690 CA   ASN    143      0.0192     37.7027     40.1300
   698 CA   TRP    144      0.0134     34.1405     34.5800
   712 CA   GLY    145      0.0144     34.7169     31.5000
   716 CA   ARG    146      0.0139     34.4543     28.5500
   727 CA   ILE    147      0.0072     30.3669     30.5900
   735 CA   VAL    148      0.0064     29.8708     30.1400
   742 CA   ALA    149      0.0074     30.4683     22.4300
   747 CA   PHE    150      0.0059     29.5642     24.0100
   758 CA   PHE    151      0.0049     28.9548     24.0000
   770 CA   GLU    152      0.0063     29.8038     28.7200
   771 CA   GLU    152      0.0063     29.8019     28.7100
   787 CA   PHE    153      0.0062     29.7682     23.5400
   798 CA   GLY    154      0.0053     29.2205     29.2900
   802 CA   GLY    155      0.0054     29.2248     27.5100
   806 CA   VAL    156      0.0065     29.9315     33.5700
   813 CA   MET    157      0.0061     29.6913     29.0100
   821 CA   CYS    158      0.0064     29.8906     26.8100
   827 CA   VAL    159      0.0107     32.4869     29.8600
   834 CA   GLU    160      0.0128     33.7567     31.0100
   843 CA   SER    161      0.0117     33.0948     25.5200
   849 CA   VAL    162      0.0165     36.0098     32.1800
   856 CA   ASN    163      0.0250     41.2241     29.3700
   864 CA   ARG    164      0.0255     41.5420     30.1500
   875 CA   GLU    165      0.0515     57.3676     33.1500
   884 CA   MET    166      0.0220     39.4087     30.7400
   892 CA   SER    167      0.0220     39.3603     31.5400
   898 CA   PRO    168      0.0385     49.4375     43.4100
   905 CA   LEU    169      0.0130     33.9035     33.1000
   913 CA   VAL    170      0.0100     32.0629     31.9600
   920 CA   ASP    171      0.0146     34.8465     36.7000
   928 CA   ASN    172      0.0145     34.8295     40.2300
   936 CA   ILE    173      0.0076     30.5873     32.6200
   944 CA   ALA    174      0.0091     31.4997     38.6900
   949 CA   LEU    175      0.0136     34.2358     40.7800
   957 CA   TRP    176      0.0102     32.1828     43.9200
   971 CA   MET    177      0.0068     30.1180     41.1900
   979 CA   THR    178      0.0099     32.0202     48.8000
   986 CA   GLU    179      0.0157     35.5098     54.2100
   995 CA   TYR    180      0.0112     32.8190     48.3100
  1007 CA   LEU    181      0.0088     31.3285     50.8700
  1015 CA   ASN    182      0.0144     34.7149     55.5400
  1023 CA   ARG    183      0.0285     43.3262     60.4700
  1034 CA   HIS    184      0.0231     40.0267     53.8700
  1044 CA   LEU    185      0.0120     33.2694     52.2000
  1052 CA   HIS    186      0.0184     37.2023     63.5600
  1062 CA   THR    187      0.0338     46.5844     60.6600
  1069 CA   TRP    188      0.0222     39.4932     54.7700
  1083 CA   ILE    189      0.0148     34.9782     58.7300
  1091 CA   GLN    190      0.0298     44.1656     63.8400
  1100 CA   ASP    191      0.0506     56.8105     62.9100
  1108 CA   ASN    192      0.0297     44.0771     58.3400
  1116 CA   GLY    193      0.0416     51.3140     60.0500
  1120 CA   GLY    194      0.0202     38.2925     58.6100
  1124 CA   TRP    195      0.0108     32.5677     54.8600
  1138 CA   ASP    196      0.0225     39.6966     61.1500
  1146 CA   ALA    197      0.0233     40.1723     52.3800
  1151 CA   PHE    198      0.0131     33.9581     53.8200
  1162 CA   VAL    199      0.0183     37.1425     49.3300
  1169 CA   GLU    200      0.0495     56.1672     57.9700
  1178 CA   LEU    201      0.0438     52.7050     42.0800
  1186 CA   TYR    202      0.0294     43.8960     48.9500
  1198 CA   GLY    203      0.0437     52.6451     51.1900
  1202 CA   PRO    204      0.1605    123.9061     60.0200

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: december 26th, 2025.