CNRS Nantes University US2B US2B
home |  start a new run |  job status |  references&downloads |  examples |  help  

Should you encounter any unexpected behaviour,
please let us know.
 elNémo has been hacked on november 27th.
It has been moved away and runs again.
**Still some additional cleaning from time to time**
Sorry for the inconvenience.


***  APOPTOSIS 10-DEC-22 8HOH  ***

<R2> analysis for 2604130138361693829

---  normal mode 25  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.0813
ASP 100.0196
ASN 110.0134
ARG 120.0144
GLU 130.0255
ILE 140.0202
VAL 150.0085
MET 160.0122
LYS 170.0184
TYR 180.0145
ILE 190.0132
HIS 200.0119
TYR 210.0148
LYS 220.0176
LEU 230.0224
SER 240.0163
GLN 250.0214
ARG 260.0391
GLY 270.0343
TYR 280.0280
GLU 290.0242
TRP 300.0196
ASP 310.0251
ALA 320.0190
SER 900.0813
GLU 910.0499
VAL 920.0360
VAL 930.0311
HIS 940.0332
LEU 950.0367
THR 960.0290
LEU 970.0238
ARG 980.0267
GLN 990.0237
ALA 1000.0182
VAL 1010.0167
ASP 1020.0193
ASP 1030.0132
PHE 1040.0203
SER 1050.0210
ARG 1060.0147
ARG 1070.0143
TYR 1080.0207
ARG 1090.0174
ARG 1100.0158
ASP 1110.0186
PHE 1120.0197
ALA 1130.0164
GLU 1140.0200
MET 1150.0063
SER 1160.0165
SER 1170.0211
GLN 1180.0177
LEU 1190.0172
HIS 1200.0196
LEU 1210.0115
THR 1220.0091
PRO 1230.0094
PHE 1240.0205
THR 1250.0260
ALA 1260.0278
ARG 1270.0419
GLY 1280.0518
ARG 1290.0327
PHE 1300.0292
ALA 1310.0494
THR 1320.0517
VAL 1330.0295
VAL 1340.0209
GLU 1350.0262
GLU 1360.0232
LEU 1370.0072
PHE 1380.0145
ARG 1390.0178
ASP 1400.0494
GLY 1410.0350
VAL 1420.0319
ASN 1430.0341
TRP 1440.0345
GLY 1450.0302
ARG 1460.0246
ILE 1470.0248
VAL 1480.0204
ALA 1490.0163
PHE 1500.0133
PHE 1510.0085
GLU 1520.0081
PHE 1530.0092
GLY 1540.0131
GLY 1550.0124
VAL 1560.0124
MET 1570.0191
CYS 1580.0222
VAL 1590.0258
GLU 1600.0202
SER 1610.0207
VAL 1620.0333
ASN 1630.0282
ARG 1640.0261
GLU 1650.0546
MET 1660.0239
SER 1670.0377
PRO 1680.0392
LEU 1690.0302
VAL 1700.0297
ASP 1710.0299
ASN 1720.0358
ILE 1730.0266
ALA 1740.0164
LEU 1750.0122
TRP 1760.0200
MET 1770.0061
THR 1780.0074
GLU 1790.0166
TYR 1800.0190
LEU 1810.0158
ASN 1820.0177
ARG 1830.0210
HIS 1840.0329
LEU 1850.0280
HIS 1860.0229
THR 1870.0337
TRP 1880.0401
ILE 1890.0303
GLN 1900.0303
ASP 1910.0446
ASN 1920.0372
GLY 1930.0292
GLY 1940.0201
TRP 1950.0135
ASP 1960.0058
ALA 1970.0200
PHE 1980.0142
VAL 1990.0081
GLU 2000.0242
LEU 2010.0199
TYR 2020.0181
GLY 2030.0279
PRO 2040.0651

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: december 26th, 2025.