CNRS Nantes University US2B US2B
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Should you encounter any unexpected behaviour,
please let us know.
 elNémo has been hacked on november 27th.
It has been moved away and runs again.
**Still some additional cleaning from time to time**
Sorry for the inconvenience.


***  HYDROLASE/PROTEIN BINDING/RNA 07-FEB-18 5ZAL  ***

Normal Mode Analysis for ID 2604130821251736441

The following table indicates for every normal mode its frequency (black, normalized relative to the lowest mode frequency) and its collectivity (magenta). If a second structure was submitted, the cummulative overlap between the normal modes and the conformational change is computed (red). The corresponding amplitude (dq) is then also given (green). Click on the mode link to obtain a visualization of the mean square displacement <R2> of the C-alpha atoms associated to each mode.

[HELP on collectivity] [HELP on overlap]

<R2> frequency collectivity
mode 7 1.00 0.5291
mode 8 1.02 0.6549
mode 9 1.36 0.5605
mode 10 1.58 0.5078
mode 11 2.02 0.7618
mode 12 2.16 0.6768
mode 13 2.38 0.5667
mode 14 2.48 0.6063
mode 15 2.79 0.6400
mode 16 3.00 0.5021
mode 17 3.33 0.4851
mode 18 3.60 0.5356
mode 19 3.75 0.5251
mode 20 3.81 0.6326
mode 21 3.98 0.3019
mode 22 4.05 0.4691
mode 23 4.31 0.3937
mode 24 4.42 0.3580
mode 25 4.63 0.3781
mode 26 4.91 0.4566
mode 27 5.09 0.4501
mode 28 5.14 0.3708
mode 29 5.44 0.6310
mode 30 5.53 0.4567
mode 31 5.58 0.4552
mode 32 5.91 0.4405
mode 33 6.10 0.4191
mode 34 6.26 0.5388
mode 35 6.39 0.3705
mode 36 6.51 0.1259
mode 37 6.80 0.3125
mode 38 6.84 0.4967
mode 39 7.01 0.4233
mode 40 7.13 0.5119
mode 41 7.22 0.3978
mode 42 7.30 0.1919
mode 43 7.53 0.4110
mode 44 7.61 0.4073
mode 45 7.65 0.3719
mode 46 7.83 0.4074
mode 47 7.96 0.3717
mode 48 8.06 0.2837
mode 49 8.14 0.5083
mode 50 8.33 0.5582
mode 51 8.40 0.2973
mode 52 8.50 0.4840
mode 53 8.64 0.1615
mode 54 8.75 0.4870
mode 55 8.91 0.3199
mode 56 8.97 0.3881
mode 57 9.26 0.4689
mode 58 9.27 0.5212
mode 59 9.45 0.3726
mode 60 9.56 0.5468
mode 61 9.62 0.4374
mode 62 9.75 0.3941
mode 63 9.91 0.1547
mode 64 10.06 0.4609
mode 65 10.17 0.4930
mode 66 10.42 0.3289
mode 67 10.52 0.2519
mode 68 10.68 0.4170
mode 69 10.74 0.5024
mode 70 10.79 0.4244
mode 71 10.86 0.4152
mode 72 10.91 0.3135
mode 73 11.06 0.3603
mode 74 11.22 0.4596
mode 75 11.39 0.3807
mode 76 11.54 0.4228
mode 77 11.58 0.3934
mode 78 11.61 0.4664
mode 79 11.79 0.5019
mode 80 11.84 0.1816
mode 81 12.01 0.3928
mode 82 12.07 0.4613
mode 83 12.18 0.2690
mode 84 12.27 0.4288
mode 85 12.32 0.2843
mode 86 12.39 0.4933
mode 87 12.54 0.1774
mode 88 12.57 0.4022
mode 89 12.66 0.3396
mode 90 12.76 0.5330
mode 91 12.79 0.4153
mode 92 12.85 0.2614
mode 93 12.91 0.3794
mode 94 12.96 0.4827
mode 95 13.08 0.3570
mode 96 13.21 0.4067
mode 97 13.24 0.4722
mode 98 13.32 0.5216
mode 99 13.40 0.4305
mode 100 13.51 0.5214
mode 101 13.59 0.2950
mode 102 13.66 0.4335
mode 103 13.76 0.5262
mode 104 13.79 0.5202
mode 105 13.98 0.5162
mode 106 14.12 0.3954

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: december 26th, 2025.