CNRS Nantes University US2B US2B
home |  start a new run |  job status |  references&downloads |  examples |  help  

Should you encounter any unexpected behaviour,
please let us know.
 elNémo has been hacked on november 27th.
It has been moved away and runs again.
**Still some additional cleaning from time to time**
Sorry for the inconvenience.


***  IMMUNE SYSTEM 14-NOV-18 6N2U  ***

CA distance fluctuations for 2604131021151763097

---  normal mode 10  ---

This matrix displays the maximum distance fluctuations between all pairs of CA atoms and between the two extreme conformations that were computed for this mode (DQMIN/DQMAX). Distance increases are plotted in blue and decreases in red for the strongest 10% of the residue pair distance changes. Every pixel corresponds to a single residue. Grey lines are drawn every 10 residues, yellow lines every 100 residues (counting from the upper left corner).

The following table indicates for every residue the two corresponding residues with the strongest CA distance fluctuations.

[HELP on distance fluctuations]

GD ok
largest increasereflargest decrease
GLU 68 0.46 LYS 1 -0.47 HIS 31
GLU 68 0.57 GLU 2 -0.22 ILE 8
GLU 68 0.41 LEU 3 -0.36 ILE 8
GLY 44 0.37 ARG 4 -0.37 ILE 8
GLY 44 0.39 CYS 5 -0.44 ASP 50
GLY 44 0.43 GLN 6 -0.50 CYS 7
GLU 46 0.62 CYS 7 -0.50 GLN 6
GLU 46 0.73 ILE 8 -0.37 ARG 4
ASN 34 0.50 LYS 9 -0.34 SER 12
ASN 34 0.30 THR 10 -0.37 GLN 6
THR 35 0.19 TYR 11 -0.25 GLN 6
ASP 50 0.16 SER 12 -0.34 LYS 9
ASP 50 0.11 LYS 13 -0.22 LYS 9
ARG 24 0.09 PRO 14 -0.18 LYS 9
GLU 2 0.10 PHE 15 -0.09 LYS 9
GLU 2 0.17 HIS 16 -0.06 PRO 51
GLU 2 0.25 PRO 17 -0.08 PRO 51
GLU 2 0.28 LYS 18 -0.06 GLU 27
ILE 8 0.26 PHE 19 -0.04 GLU 27
GLU 2 0.31 ILE 20 -0.07 GLU 27
GLU 2 0.41 LYS 21 -0.12 GLU 27
GLU 2 0.46 GLU 22 -0.18 VAL 25
GLU 2 0.44 LEU 23 -0.18 VAL 25
GLU 2 0.36 ARG 24 -0.18 GLU 27
GLU 2 0.32 VAL 25 -0.18 GLU 22
GLU 2 0.22 ILE 26 -0.35 LYS 1
LYS 9 0.22 GLU 27 -0.38 LYS 1
LYS 9 0.31 SER 28 -0.40 LYS 1
LYS 9 0.24 GLY 29 -0.46 LYS 1
ARG 45 0.19 PRO 30 -0.43 LYS 1
GLY 44 0.24 HIS 31 -0.47 LYS 1
GLU 46 0.29 CYS 32 -0.41 LYS 1
LYS 9 0.43 ALA 33 -0.39 LYS 52
LYS 9 0.50 ASN 34 -0.40 LYS 52
LYS 9 0.38 THR 35 -0.35 LYS 1
LYS 9 0.23 GLU 36 -0.33 LYS 1
GLU 2 0.14 ILE 37 -0.21 LYS 1
ILE 8 0.24 ILE 38 -0.14 LYS 1
ILE 8 0.34 VAL 39 -0.12 VAL 25
ILE 8 0.48 LYS 40 -0.12 VAL 25
ILE 8 0.43 LEU 41 -0.09 VAL 25
ILE 8 0.40 SER 42 -0.08 VAL 25
ILE 8 0.49 ASP 43 -0.07 VAL 25
ILE 8 0.59 GLY 44 -0.11 ARG 24
ILE 8 0.70 ARG 45 -0.11 ARG 24
ILE 8 0.73 GLU 46 -0.15 ARG 24
ILE 8 0.49 LEU 47 -0.16 LYS 1
ASN 34 0.25 CYS 48 -0.26 LYS 1
THR 35 0.14 LEU 49 -0.25 GLN 6
SER 12 0.16 ASP 50 -0.44 CYS 5
GLU 27 0.19 PRO 51 -0.33 CYS 5
GLU 27 0.21 LYS 52 -0.42 CYS 5
ARG 24 0.14 GLU 53 -0.37 CYS 5
ARG 24 0.19 ASN 54 -0.29 ALA 33
ARG 24 0.17 TRP 55 -0.23 CYS 5
ARG 24 0.20 VAL 56 -0.21 CYS 5
ARG 24 0.28 GLN 57 -0.29 ASN 34
ARG 24 0.25 ARG 58 -0.24 ASN 34
ARG 24 0.23 VAL 59 -0.17 ASN 34
ARG 24 0.33 VAL 60 -0.21 ASN 34
GLU 2 0.31 GLU 61 -0.27 ASN 34
GLU 2 0.31 LYS 62 -0.19 ASN 34
GLU 2 0.36 PHE 63 -0.15 THR 35
GLU 2 0.45 LEU 64 -0.20 THR 35
GLU 2 0.43 LYS 65 -0.19 ASN 34
GLU 2 0.43 ARG 66 -0.14 THR 35
GLU 2 0.53 ALA 67 -0.14 GLU 27
GLU 2 0.57 GLU 68 -0.14 SER 28
GLU 2 0.53 ASN 69 -0.12 SER 28

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: december 26th, 2025.