CNRS Nantes University US2B US2B
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Should you encounter any unexpected behaviour,
please let us know.
 elNémo has been hacked on november 27th.
It has been moved away and runs again.
**Still some additional cleaning from time to time**
Sorry for the inconvenience.


***  IMMUNE SYSTEM 14-NOV-18 6N2U  ***

CA distance fluctuations for 2604131021151763097

---  normal mode 9  ---

This matrix displays the maximum distance fluctuations between all pairs of CA atoms and between the two extreme conformations that were computed for this mode (DQMIN/DQMAX). Distance increases are plotted in blue and decreases in red for the strongest 10% of the residue pair distance changes. Every pixel corresponds to a single residue. Grey lines are drawn every 10 residues, yellow lines every 100 residues (counting from the upper left corner).

The following table indicates for every residue the two corresponding residues with the strongest CA distance fluctuations.

[HELP on distance fluctuations]

GD ok
largest increasereflargest decrease
ARG 45 0.54 LYS 1 -0.38 GLU 68
ARG 45 0.48 GLU 2 -0.46 GLU 68
ARG 45 0.59 LEU 3 -0.34 GLU 68
ARG 45 0.55 ARG 4 -0.31 GLU 68
GLU 46 0.49 CYS 5 -0.24 GLU 68
GLU 46 0.67 GLN 6 -0.16 GLU 68
LEU 47 0.53 CYS 7 -0.14 ILE 37
ARG 4 0.48 ILE 8 -0.20 LYS 52
CYS 32 0.42 LYS 9 -0.18 ILE 38
CYS 5 0.35 THR 10 -0.09 ILE 38
CYS 7 0.38 TYR 11 -0.09 ARG 45
CYS 5 0.26 SER 12 -0.11 ARG 45
GLN 6 0.26 LYS 13 -0.12 ARG 45
GLN 6 0.21 PRO 14 -0.13 GLU 27
GLN 6 0.25 PHE 15 -0.14 GLU 27
GLN 6 0.21 HIS 16 -0.21 GLU 27
GLN 6 0.17 PRO 17 -0.27 GLU 27
GLN 6 0.19 LYS 18 -0.23 GLU 27
GLN 6 0.29 PHE 19 -0.13 GLU 27
GLN 6 0.25 ILE 20 -0.15 GLU 27
GLN 6 0.19 LYS 21 -0.14 GLU 27
GLN 6 0.12 GLU 22 -0.12 ARG 24
PRO 51 0.09 LEU 23 -0.28 ARG 24
VAL 25 0.12 ARG 24 -0.31 GLU 68
ARG 24 0.12 VAL 25 -0.48 ILE 26
GLU 46 0.16 ILE 26 -0.49 GLU 68
GLU 46 0.15 GLU 27 -0.64 GLU 61
GLU 46 0.21 SER 28 -0.53 GLU 61
LYS 9 0.25 GLY 29 -0.53 GLU 68
ILE 8 0.34 PRO 30 -0.52 GLU 68
ARG 45 0.39 HIS 31 -0.43 GLU 68
LYS 9 0.42 CYS 32 -0.36 GLU 68
LYS 9 0.41 ALA 33 -0.34 GLU 68
THR 10 0.30 ASN 34 -0.30 GLU 61
GLU 46 0.16 THR 35 -0.39 GLU 61
GLU 46 0.19 GLU 36 -0.26 GLU 68
PRO 51 0.10 ILE 37 -0.19 GLU 68
VAL 39 0.20 ILE 38 -0.18 LYS 9
GLN 6 0.28 VAL 39 -0.10 LYS 9
GLN 6 0.37 LYS 40 -0.08 LYS 13
GLN 6 0.39 LEU 41 -0.09 LYS 13
GLN 6 0.33 SER 42 -0.08 PRO 14
LEU 3 0.42 ASP 43 -0.11 LYS 13
LEU 3 0.48 GLY 44 -0.10 LYS 13
GLN 6 0.61 ARG 45 -0.12 LYS 13
GLN 6 0.67 GLU 46 -0.09 SER 12
GLN 6 0.61 LEU 47 -0.08 THR 10
GLN 6 0.35 CYS 48 -0.17 ILE 38
GLN 6 0.20 LEU 49 -0.08 LYS 9
LYS 1 0.12 ASP 50 -0.18 ILE 8
VAL 25 0.12 PRO 51 -0.24 SER 28
VAL 25 0.10 LYS 52 -0.23 SER 28
LYS 1 0.06 GLU 53 -0.19 SER 28
LEU 23 0.06 ASN 54 -0.28 SER 28
GLN 6 0.08 TRP 55 -0.26 GLU 27
GLN 6 0.07 VAL 56 -0.28 GLU 27
LEU 23 0.08 GLN 57 -0.48 GLU 27
TRP 55 0.08 ARG 58 -0.45 GLU 27
LYS 62 0.08 VAL 59 -0.37 GLU 27
GLN 57 0.08 VAL 60 -0.49 GLU 27
LEU 64 0.06 GLU 61 -0.64 GLU 27
PRO 14 0.11 LYS 62 -0.49 GLU 27
LEU 64 0.06 PHE 63 -0.43 GLU 27
PHE 63 0.06 LEU 64 -0.61 GLU 27
PHE 15 0.09 LYS 65 -0.60 GLU 27
GLU 68 0.11 ARG 66 -0.45 GLU 27
SER 42 0.05 ALA 67 -0.45 GLU 27
ARG 66 0.11 GLU 68 -0.58 GLU 27
LYS 18 0.10 ASN 69 -0.49 GLU 27

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: december 26th, 2025.