CNRS Nantes University US2B US2B
home |  start a new run |  job status |  references&downloads |  examples |  help  

Should you encounter any unexpected behaviour,
please let us know.
elNémo has been hacked on november 27th.
It has been moved away and runs again.
**Still some additional cleaning from time to time**
Sorry for the inconvenience.


***    ***

Normal Mode Analysis for ID 2604131700381839394

The following table indicates for every normal mode its frequency (black, normalized relative to the lowest mode frequency) and its collectivity (magenta). If a second structure was submitted, the cummulative overlap between the normal modes and the conformational change is computed (red). The corresponding amplitude (dq) is then also given (green). Click on the mode link to obtain a visualization of the mean square displacement <R2> of the C-alpha atoms associated to each mode.

[HELP on collectivity] [HELP on overlap]

<R2> frequency collectivity
mode 7 1.00 0.5206
mode 8 1.21 0.4092
mode 9 1.53 0.3541
mode 10 2.12 0.5997
mode 11 2.24 0.5108
mode 12 2.54 0.4548
mode 13 2.88 0.4238
mode 14 2.94 0.5711
mode 15 3.08 0.3726
mode 16 3.23 0.5509
mode 17 3.39 0.4533
mode 18 3.66 0.5666
mode 19 3.82 0.5490
mode 20 4.00 0.3202
mode 21 4.11 0.5772
mode 22 4.28 0.3297
mode 23 4.39 0.5146
mode 24 4.50 0.3953
mode 25 4.59 0.4135
mode 26 4.74 0.2921
mode 27 4.83 0.3010
mode 28 4.90 0.1947
mode 29 5.00 0.4097
mode 30 5.21 0.4126
mode 31 5.28 0.4182
mode 32 5.46 0.3082
mode 33 5.56 0.5385
mode 34 5.70 0.4465
mode 35 5.73 0.4244
mode 36 5.86 0.0709
mode 37 5.90 0.4650
mode 38 5.94 0.3731
mode 39 6.02 0.3266
mode 40 6.11 0.4027
mode 41 6.19 0.3225
mode 42 6.29 0.2466
mode 43 6.35 0.4156
mode 44 6.38 0.5202
mode 45 6.46 0.5217
mode 46 6.64 0.4591
mode 47 6.67 0.5188
mode 48 6.77 0.4241
mode 49 6.85 0.2112
mode 50 6.97 0.1945
mode 51 7.00 0.4802
mode 52 7.05 0.5376
mode 53 7.09 0.4030
mode 54 7.15 0.4335
mode 55 7.21 0.5429
mode 56 7.27 0.4583
mode 57 7.32 0.4284
mode 58 7.37 0.4410
mode 59 7.43 0.3920
mode 60 7.54 0.4207
mode 61 7.57 0.5414
mode 62 7.63 0.4413
mode 63 7.69 0.4042
mode 64 7.74 0.4949
mode 65 7.82 0.4660
mode 66 7.88 0.4821
mode 67 7.92 0.4450
mode 68 7.97 0.4073
mode 69 8.03 0.6361
mode 70 8.12 0.3281
mode 71 8.18 0.4588
mode 72 8.20 0.2081
mode 73 8.26 0.4440
mode 74 8.28 0.4557
mode 75 8.36 0.4958
mode 76 8.39 0.5095
mode 77 8.42 0.5258
mode 78 8.48 0.4757
mode 79 8.52 0.4815
mode 80 8.57 0.4997
mode 81 8.61 0.5534
mode 82 8.65 0.5702
mode 83 8.72 0.4459
mode 84 8.75 0.3771
mode 85 8.81 0.4740
mode 86 8.87 0.3643
mode 87 8.92 0.5293
mode 88 8.94 0.4061
mode 89 9.02 0.4592
mode 90 9.10 0.4873
mode 91 9.11 0.4839
mode 92 9.15 0.4332
mode 93 9.22 0.5156
mode 94 9.23 0.4915
mode 95 9.24 0.4481
mode 96 9.31 0.5481
mode 97 9.37 0.5370
mode 98 9.43 0.2982
mode 99 9.48 0.5736
mode 100 9.52 0.5012
mode 101 9.54 0.5063
mode 102 9.56 0.5127
mode 103 9.65 0.4958
mode 104 9.66 0.4904
mode 105 9.68 0.4999
mode 106 9.75 0.3686

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: december 26th, 2025.