CNRS Nantes University US2B US2B
home |  start a new run |  job status |  references&downloads |  examples |  help  

Should you encounter any unexpected behaviour,
please let us know.
 elNémo has been hacked on november 27th.
It has been moved away and runs again.
**Still some additional cleaning from time to time**
Sorry for the inconvenience.


***  APOPTOSIS 16-FEB-19 6O0K  ***

<R2> analysis for 2604160511322307744

---  normal mode 29  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.0607
TYR 90.0179
ASP 100.0179
ASN 110.0169
ARG 120.0185
GLU 130.0170
ILE 140.0170
VAL 150.0134
MET 160.0134
LYS 170.0168
TYR 180.0147
ILE 190.0120
ILE 190.0120
HIS 200.0142
TYR 210.0219
LYS 220.0213
LEU 230.0162
LEU 230.0161
SER 240.0203
SER 240.0203
GLN 250.0293
ARG 260.0179
GLY 270.0135
TYR 280.0073
GLU 290.0155
TRP 300.0062
ASP 310.0087
ALA 320.0076
GLY 330.0089
ASP 340.0181
ASP 350.0395
SER 900.0180
GLU 910.0229
VAL 920.0182
VAL 930.0137
VAL 930.0136
HIS 940.0193
LEU 950.0233
THR 960.0137
LEU 970.0122
ARG 980.0212
GLN 990.0191
ALA 1000.0122
GLY 1010.0192
ASP 1020.0237
ASP 1030.0212
PHE 1040.0267
SER 1050.0270
SER 1050.0270
ARG 1060.0158
ARG 1070.0254
TYR 1080.0345
ARG 1090.0288
ARG 1100.0522
ASP 1110.0464
PHE 1120.0366
ALA 1130.0556
GLU 1140.0520
MET 1150.0120
SER 1160.0317
SER 1160.0317
SER 1170.0449
SER 1170.0441
GLN 1180.0045
GLN 1180.0045
LEU 1190.0318
HIS 1200.0460
LEU 1210.0319
THR 1220.0269
PRO 1230.0060
PHE 1240.0234
THR 1250.0341
ALA 1260.0236
ARG 1270.0191
GLY 1280.0366
ARG 1290.0341
PHE 1300.0245
ALA 1310.0292
THR 1320.0426
VAL 1330.0323
VAL 1340.0284
GLU 1350.0385
GLU 1360.0338
LEU 1370.0267
PHE 1380.0281
ARG 1390.0407
ASP 1400.0396
GLY 1410.0315
VAL 1420.0211
ASN 1430.0203
TRP 1440.0131
GLY 1450.0159
ARG 1460.0252
ILE 1470.0156
VAL 1480.0075
ALA 1490.0065
PHE 1500.0161
PHE 1510.0052
GLU 1520.0133
PHE 1530.0131
GLY 1540.0080
GLY 1550.0130
VAL 1560.0206
MET 1570.0176
CYS 1580.0096
VAL 1590.0172
GLU 1600.0243
SER 1610.0163
VAL 1620.0197
ASN 1630.0401
ARG 1640.0309
GLU 1650.0607
MET 1660.0262
SER 1670.0216
PRO 1680.0255
LEU 1690.0112
VAL 1700.0083
ASP 1710.0138
ASN 1720.0114
ILE 1730.0061
ALA 1740.0143
LEU 1750.0169
TRP 1760.0138
MET 1770.0172
THR 1780.0232
THR 1780.0232
GLU 1790.0193
GLU 1790.0188
TYR 1800.0182
TYR 1800.0183
LEU 1810.0206
ASN 1820.0206
ARG 1830.0184
HIS 1840.0169
LEU 1850.0190
HIS 1860.0180
THR 1870.0143
TRP 1880.0072
ILE 1890.0120
GLN 1900.0224
ASP 1910.0190
ASN 1920.0119
GLY 1930.0184
GLY 1940.0169
TRP 1950.0098
ASP 1960.0121
ASP 1960.0122
ALA 1970.0109
PHE 1980.0021
VAL 1990.0049
GLU 2000.0196
LEU 2010.0168
TYR 2020.0162
GLY 2030.0181

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: december 26th, 2025.