Should you encounter any unexpected behaviour,
please let us know.
elNémo has been hacked on november 27th.
It has been moved away and runs again.
Still some additional cleaning from time to time
Sorry for the inconvenience.

* TRANSPORT PROTEIN 23-FEB-99 1NGL *

CA distance fluctuations for 2604161210002404095

--- normal mode 10 ---

This matrix displays the maximum distance fluctuations between all pairs of CA atoms and between the two extreme conformations that were computed for this mode (DQMIN/DQMAX). Distance increases are plotted in blue and decreases in red for the strongest 10% of the residue pair distance changes. Every pixel corresponds to a single residue. Grey lines are drawn every 10 residues, yellow lines every 100 residues (counting from the upper left corner).

The following table indicates for every residue the two corresponding residues with the strongest CA distance fluctuations.

[HELP on distance fluctuations]

GD ok

largest increase ref largest decrease
SER 6 0.26 MET 1 -0.20 ASP 7

ASP 3 0.02 GLN 2 -0.84 ALA 11

THR 5 0.05 ASP 3 -0.55 ASP 7

ASN 130 0.17 SER 4 -0.40 ASP 46

ASN 130 0.24 THR 5 -0.47 GLU 151

ASN 130 0.29 SER 6 -0.51 GLU 151

ASN 130 0.28 ASP 7 -0.72 GLN 2

PRO 10 0.24 LEU 8 -0.58 GLN 2

GLU 132 0.20 ILE 9 -0.74 GLN 2

LEU 8 0.24 PRO 10 -0.83 GLN 2

ASP 7 0.25 ALA 11 -0.84 GLN 2

LYS 125 0.15 PRO 12 -0.73 GLN 2

PRO 10 0.18 PRO 13 -0.65 GLN 2

PRO 10 0.16 LEU 14 -0.59 GLN 2

PRO 10 0.08 SER 15 -0.54 GLN 2

PRO 10 0.06 LYS 16 -0.55 GLN 2

ALA 11 0.13 VAL 17 -0.53 GLN 2

ALA 11 0.10 PRO 18 -0.48 GLN 2

ALA 11 0.12 LEU 19 -0.44 GLN 2

ALA 11 0.09 GLN 20 -0.40 GLN 2

ALA 11 0.08 GLN 21 -0.38 GLN 2

ALA 11 0.09 ASN 22 -0.36 GLN 2

ALA 11 0.08 PHE 23 -0.35 GLN 2

ALA 11 0.08 GLN 24 -0.33 GLN 2

ALA 11 0.09 ASP 25 -0.33 GLN 2

ALA 11 0.07 ASN 26 -0.31 GLN 2

ALA 11 0.06 GLN 27 -0.31 GLN 2

ALA 11 0.07 PHE 28 -0.33 GLN 2

ALA 11 0.07 GLN 29 -0.32 GLN 2

ALA 11 0.06 GLY 30 -0.32 GLN 2

ALA 11 0.05 LYS 31 -0.32 GLN 2

ALA 11 0.04 TRP 32 -0.34 GLN 2

ALA 11 0.03 TYR 33 -0.34 GLN 2

ALA 11 0.03 VAL 34 -0.37 GLN 2

ASP 46 0.02 VAL 35 -0.38 GLN 2

ASP 46 0.02 GLY 36 -0.42 GLN 2

ALA 11 0.04 LEU 37 -0.46 GLN 2

ALA 11 0.06 ALA 38 -0.52 GLN 2

ALA 11 0.11 GLY 39 -0.55 GLN 2

LEU 8 0.13 ASN 40 -0.60 GLN 2

ALA 11 0.12 ALA 41 -0.53 GLN 2

ALA 11 0.08 ILE 42 -0.49 GLN 2

ALA 11 0.04 LEU 43 -0.45 GLN 2

GLU 151 0.02 ARG 44 -0.45 GLN 2

GLU 151 0.02 GLU 45 -0.40 GLN 2

LYS 150 0.03 ASP 46 -0.45 THR 5

LYS 150 0.03 LYS 47 -0.39 THR 5

GLU 144 0.02 ASP 48 -0.33 THR 5

GLU 144 0.02 PRO 49 -0.36 THR 5

GLU 144 0.02 GLN 50 -0.36 GLN 2

GLU 144 0.02 LYS 51 -0.33 GLN 2

ALA 11 0.02 MET 52 -0.34 GLN 2

ALA 11 0.03 TYR 53 -0.33 GLN 2

ALA 11 0.04 ALA 54 -0.33 GLN 2

ALA 11 0.06 THR 55 -0.33 GLN 2

ALA 11 0.07 ILE 56 -0.32 GLN 2

ALA 11 0.08 TYR 57 -0.33 GLN 2

ALA 11 0.08 GLU 58 -0.31 GLN 2

ALA 11 0.09 LEU 59 -0.31 GLN 2

ALA 11 0.09 LYS 60 -0.29 GLN 2

ALA 11 0.09 GLU 61 -0.28 GLN 2

ALA 11 0.10 ASP 62 -0.29 GLN 2

ALA 11 0.11 LYS 63 -0.31 GLN 2

ALA 11 0.11 SER 64 -0.32 GLN 2

ALA 11 0.10 TYR 65 -0.32 GLN 2

ALA 11 0.10 ASN 66 -0.31 GLN 2

ALA 11 0.09 VAL 67 -0.32 GLN 2

ALA 11 0.08 THR 68 -0.31 GLN 2

ALA 11 0.07 SER 69 -0.32 GLN 2

ALA 11 0.05 VAL 70 -0.30 GLN 2

ALA 11 0.04 LEU 71 -0.29 GLN 2

ALA 11 0.02 PHE 72 -0.28 GLN 2

ALA 11 0.02 ARG 73 -0.26 GLN 2

GLY 179 0.02 LYS 74 -0.26 THR 5

GLN 27 0.02 LYS 75 -0.25 THR 5

ALA 11 0.02 LYS 76 -0.24 GLN 2

ALA 11 0.03 CYS 77 -0.26 GLN 2

ALA 11 0.05 ASP 78 -0.26 GLN 2

ALA 11 0.06 TYR 79 -0.28 GLN 2

ALA 11 0.08 TRP 80 -0.29 GLN 2

ALA 11 0.09 ILE 81 -0.30 GLN 2

ALA 11 0.11 ARG 82 -0.32 GLN 2

ALA 11 0.12 THR 83 -0.33 GLN 2

ALA 11 0.13 PHE 84 -0.35 GLN 2

ALA 11 0.13 VAL 85 -0.34 GLN 2

ALA 11 0.14 PRO 86 -0.36 GLN 2

ALA 11 0.17 GLY 87 -0.36 GLN 2

ALA 11 0.16 CYS 88 -0.35 GLN 2

ALA 11 0.14 GLN 89 -0.36 GLN 2

ALA 11 0.12 PRO 90 -0.36 GLN 2

ALA 11 0.14 GLY 91 -0.39 GLN 2

ALA 11 0.17 GLU 92 -0.40 GLN 2

ALA 11 0.16 PHE 93 -0.38 GLN 2

ALA 11 0.17 THR 94 -0.38 GLN 2

ALA 11 0.15 LEU 95 -0.36 GLN 2

ALA 11 0.14 GLY 96 -0.33 GLN 2

ALA 11 0.16 ASN 97 -0.32 GLN 2

ASP 7 0.18 ILE 98 -0.34 GLN 2

ASP 7 0.20 LYS 99 -0.32 GLN 2

ASP 7 0.18 SER 100 -0.30 GLN 2

ASP 7 0.17 TYR 101 -0.31 GLN 2

ASP 7 0.18 PRO 102 -0.30 GLN 2

ASP 7 0.19 GLY 103 -0.32 GLN 2

ASP 7 0.18 LEU 104 -0.35 GLN 2

ASP 7 0.23 THR 105 -0.37 GLN 2

ASP 7 0.23 SER 106 -0.39 GLN 2

ALA 11 0.20 TYR 107 -0.40 GLN 2

ALA 11 0.20 LEU 108 -0.42 GLN 2

ALA 11 0.17 VAL 109 -0.42 GLN 2

ALA 11 0.16 ARG 110 -0.43 GLN 2

ALA 11 0.12 VAL 111 -0.43 GLN 2

ALA 11 0.10 VAL 112 -0.45 GLN 2

ALA 11 0.06 SER 113 -0.42 GLN 2

ALA 11 0.05 THR 114 -0.39 GLN 2

PRO 18 0.03 ASN 115 -0.37 GLN 2

ALA 11 0.03 TYR 116 -0.34 GLN 2

PRO 18 0.02 ASN 117 -0.32 GLN 2

PRO 18 0.02 GLN 118 -0.34 GLN 2

PRO 18 0.02 HIS 119 -0.37 GLN 2

ALA 11 0.04 ALA 120 -0.40 GLN 2

ALA 11 0.06 MET 121 -0.44 GLN 2

ALA 11 0.11 VAL 122 -0.44 GLN 2

ALA 11 0.15 PHE 123 -0.48 GLN 2

ALA 11 0.17 PHE 124 -0.46 GLN 2

ALA 11 0.22 LYS 125 -0.47 GLN 2

ALA 11 0.21 LYS 126 -0.44 GLN 2

ASP 7 0.23 VAL 127 -0.42 GLN 2

ASP 7 0.21 SER 128 -0.38 GLN 2

ASP 7 0.24 GLN 129 -0.35 GLN 2

SER 6 0.29 ASN 130 -0.38 GLN 2

SER 6 0.26 ARG 131 -0.42 GLN 2

ASP 7 0.27 GLU 132 -0.47 GLN 2

ALA 11 0.20 TYR 133 -0.50 GLN 2

ALA 11 0.19 PHE 134 -0.51 GLN 2

ALA 11 0.14 LYS 135 -0.50 GLN 2

ALA 11 0.11 ILE 136 -0.49 GLN 2

ALA 11 0.07 THR 137 -0.45 GLN 2

ALA 11 0.04 LEU 138 -0.42 GLN 2

ALA 11 0.03 TYR 139 -0.38 GLN 2

ALA 11 0.02 GLY 140 -0.35 GLN 2

ALA 11 0.03 ARG 141 -0.33 GLN 2

ILE 173 0.03 THR 142 -0.31 GLN 2

ILE 173 0.03 LYS 143 -0.29 GLN 2

ILE 173 0.04 GLU 144 -0.30 GLN 2

PRO 172 0.02 LEU 145 -0.32 GLN 2

PRO 18 0.03 THR 146 -0.34 SER 6

ASP 46 0.03 SER 147 -0.40 SER 6

PRO 18 0.03 GLU 148 -0.43 SER 6

PRO 18 0.03 LEU 149 -0.37 SER 6

ASP 46 0.03 LYS 150 -0.43 SER 6

ASP 46 0.03 GLU 151 -0.51 SER 6

PHE 153 0.03 ASN 152 -0.42 SER 6

ASN 152 0.03 PHE 153 -0.44 GLN 2

ILE 167 0.04 ILE 154 -0.47 GLN 2

GLU 132 0.04 ARG 155 -0.48 SER 6

GLU 132 0.03 PHE 156 -0.49 GLN 2

GLU 132 0.04 SER 157 -0.55 GLN 2

GLU 132 0.05 LYS 158 -0.57 GLN 2

GLU 132 0.06 SER 159 -0.56 GLN 2

GLU 132 0.06 LEU 160 -0.62 GLN 2

GLU 132 0.07 GLY 161 -0.68 GLN 2

GLU 132 0.07 LEU 162 -0.68 GLN 2

SER 159 0.05 PRO 163 -0.67 GLN 2

ILE 9 0.09 GLU 164 -0.79 GLN 2

ILE 9 0.07 ASN 165 -0.69 GLN 2

ILE 154 0.03 HIS 166 -0.57 GLN 2

ILE 154 0.04 ILE 167 -0.57 GLN 2

GLU 151 0.03 VAL 168 -0.50 GLN 2

ASP 46 0.02 PHE 169 -0.43 GLN 2

ASP 46 0.03 PRO 170 -0.40 GLN 2

ASP 46 0.02 VAL 171 -0.37 GLN 2

GLU 144 0.03 PRO 172 -0.38 THR 5

GLU 144 0.04 ILE 173 -0.35 THR 5

LYS 143 0.02 ASP 174 -0.33 THR 5

THR 142 0.02 GLN 175 -0.29 GLN 2

ARG 141 0.01 CYS 176 -0.27 GLN 2

GLY 179 0.02 ILE 177 -0.26 GLN 2

LYS 74 0.02 ASP 178 -0.28 THR 5

ILE 177 0.02 GLY 179 -0.27 THR 5

If you find results from this site helpful for your research, please cite one of our papers:

K. Suhre & Y.H. Sanejouand, ElNemo: a normal mode web-server for protein movement analysis and the generation of templates for molecular replacement. Nucleic Acids Research, 32, W610-W614, 2004.
K. Suhre & Y.H. Sanejouand, On the potential of normal mode analysis for solving difficult molecular replacement problems. Acta Cryst. D vol.60, p796-799, 2004 © International Union of Crystallography.

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: december 26th, 2025.

Should you encounter any unexpected behaviour, please let us know. elNémo has been hacked on november 27th. It has been moved away and runs again. **Still some additional cleaning from time to time** Sorry for the inconvenience.

*** TRANSPORT PROTEIN 23-FEB-99 1NGL ***

CA distance fluctuations for 2604161210002404095

--- normal mode 10 ---

Should you encounter any unexpected behaviour,
please let us know.
elNémo has been hacked on november 27th.
It has been moved away and runs again.
Still some additional cleaning from time to time
Sorry for the inconvenience.

* TRANSPORT PROTEIN 23-FEB-99 1NGL *