CNRS Nantes University US2B US2B
home |  start a new run |  job status |  references&downloads |  examples |  help  

Should you encounter any unexpected behaviour,
please let us know.
 elNémo has been hacked on november 27th.
It has been moved away and runs again.
**Still some additional cleaning from time to time**
Sorry for the inconvenience.


***  TRANSPORT PROTEIN 23-FEB-99 1NGL  ***

<R2> analysis for 2604161210002404095

---  normal mode 101  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.0498
MET 10.0154
GLN 20.0406
ASP 30.0480
SER 40.0184
THR 50.0162
SER 60.0131
ASP 70.0321
LEU 80.0358
ILE 90.0202
PRO 100.0061
ALA 110.0101
PRO 120.0087
PRO 130.0182
LEU 140.0130
SER 150.0070
LYS 160.0043
VAL 170.0074
PRO 180.0070
LEU 190.0070
GLN 200.0068
GLN 210.0069
ASN 220.0142
PHE 230.0073
GLN 240.0087
ASP 250.0040
ASN 260.0190
GLN 270.0155
PHE 280.0029
GLN 290.0046
GLY 300.0071
LYS 310.0088
TRP 320.0049
TYR 330.0055
VAL 340.0018
VAL 350.0021
GLY 360.0055
LEU 370.0049
ALA 380.0065
GLY 390.0076
ASN 400.0101
ALA 410.0108
ILE 420.0097
LEU 430.0087
ARG 440.0024
GLU 450.0055
ASP 460.0072
LYS 470.0058
ASP 480.0070
PRO 490.0054
GLN 500.0036
LYS 510.0076
MET 520.0097
TYR 530.0029
ALA 540.0088
THR 550.0070
ILE 560.0087
TYR 570.0048
GLU 580.0033
LEU 590.0047
LYS 600.0054
GLU 610.0081
ASP 620.0028
LYS 630.0042
SER 640.0042
TYR 650.0029
ASN 660.0049
VAL 670.0038
THR 680.0071
SER 690.0048
VAL 700.0096
LEU 710.0086
PHE 720.0164
ARG 730.0389
LYS 740.0219
LYS 750.0376
LYS 760.0221
CYS 770.0138
ASP 780.0084
TYR 790.0133
TRP 800.0220
ILE 810.0060
ARG 820.0159
THR 830.0069
PHE 840.0049
VAL 850.0049
PRO 860.0021
GLY 870.0054
CYS 880.0181
GLN 890.0208
PRO 900.0042
GLY 910.0026
GLU 920.0055
PHE 930.0052
THR 940.0084
LEU 950.0127
GLY 960.0144
ASN 970.0120
ILE 980.0111
LYS 990.0321
SER 1000.0134
TYR 1010.0114
PRO 1020.0149
GLY 1030.0413
LEU 1040.0150
THR 1050.0139
SER 1060.0071
TYR 1070.0070
LEU 1080.0076
VAL 1090.0046
ARG 1100.0057
VAL 1110.0055
VAL 1120.0075
SER 1130.0068
THR 1140.0032
ASN 1150.0028
TYR 1160.0017
ASN 1170.0037
GLN 1180.0052
HIS 1190.0034
ALA 1200.0033
MET 1210.0061
VAL 1220.0046
PHE 1230.0050
PHE 1240.0025
LYS 1250.0034
LYS 1260.0042
VAL 1270.0034
SER 1280.0137
GLN 1290.0132
ASN 1300.0324
ARG 1310.0184
GLU 1320.0147
TYR 1330.0078
PHE 1340.0021
LYS 1350.0032
ILE 1360.0052
THR 1370.0047
LEU 1380.0059
TYR 1390.0024
GLY 1400.0020
ARG 1410.0012
THR 1420.0055
LYS 1430.0138
GLU 1440.0116
LEU 1450.0060
THR 1460.0072
SER 1470.0079
GLU 1480.0037
LEU 1490.0048
LYS 1500.0080
GLU 1510.0118
ASN 1520.0083
PHE 1530.0122
ILE 1540.0167
ARG 1550.0163
PHE 1560.0053
SER 1570.0062
LYS 1580.0095
SER 1590.0119
LEU 1600.0052
GLY 1610.0062
LEU 1620.0087
PRO 1630.0058
GLU 1640.0070
ASN 1650.0098
HIS 1660.0088
ILE 1670.0059
VAL 1680.0070
PHE 1690.0093
PRO 1700.0022
VAL 1710.0043
PRO 1720.0160
ILE 1730.0246
ASP 1740.0279
GLN 1750.0242
CYS 1760.0238
ILE 1770.0498
ASP 1780.0259
GLY 1790.0100

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: december 26th, 2025.