CNRS Nantes University US2B US2B
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Should you encounter any unexpected behaviour,
please let us know.
 elNémo has been hacked on november 27th.
It has been moved away and runs again.
**Still some additional cleaning from time to time**
Sorry for the inconvenience.


***  TRANSPORT PROTEIN 23-FEB-99 1NGL  ***

<R2> analysis for 2604161210002404095

---  normal mode 104  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.0722
MET 10.0059
GLN 20.0028
ASP 30.0084
SER 40.0064
THR 50.0033
SER 60.0057
ASP 70.0039
LEU 80.0072
ILE 90.0060
PRO 100.0057
ALA 110.0159
PRO 120.0090
PRO 130.0288
LEU 140.0055
SER 150.0072
LYS 160.0050
VAL 170.0033
PRO 180.0053
LEU 190.0061
GLN 200.0080
GLN 210.0129
ASN 220.0613
PHE 230.0064
GLN 240.0278
ASP 250.0124
ASN 260.0234
GLN 270.0244
PHE 280.0048
GLN 290.0100
GLY 300.0062
LYS 310.0040
TRP 320.0042
TYR 330.0087
VAL 340.0111
VAL 350.0057
GLY 360.0038
LEU 370.0050
ALA 380.0086
GLY 390.0127
ASN 400.0176
ALA 410.0101
ILE 420.0099
LEU 430.0058
ARG 440.0047
GLU 450.0171
ASP 460.0252
LYS 470.0292
ASP 480.0214
PRO 490.0062
GLN 500.0039
LYS 510.0159
MET 520.0157
TYR 530.0129
ALA 540.0088
THR 550.0048
ILE 560.0009
TYR 570.0028
GLU 580.0074
LEU 590.0173
LYS 600.0200
GLU 610.0088
ASP 620.0076
LYS 630.0080
SER 640.0061
TYR 650.0041
ASN 660.0052
VAL 670.0052
THR 680.0061
SER 690.0061
VAL 700.0031
LEU 710.0029
PHE 720.0086
ARG 730.0133
LYS 740.0081
LYS 750.0111
LYS 760.0073
CYS 770.0071
ASP 780.0115
TYR 790.0142
TRP 800.0133
ILE 810.0083
ARG 820.0098
THR 830.0103
PHE 840.0054
VAL 850.0040
PRO 860.0106
GLY 870.0111
CYS 880.0301
GLN 890.0127
PRO 900.0238
GLY 910.0148
GLU 920.0138
PHE 930.0074
THR 940.0096
LEU 950.0167
GLY 960.0197
ASN 970.0210
ILE 980.0218
LYS 990.0722
SER 1000.0361
TYR 1010.0280
PRO 1020.0236
GLY 1030.0653
LEU 1040.0104
THR 1050.0068
SER 1060.0056
TYR 1070.0126
LEU 1080.0077
VAL 1090.0041
ARG 1100.0088
VAL 1110.0056
VAL 1120.0063
SER 1130.0040
THR 1140.0026
ASN 1150.0080
TYR 1160.0032
ASN 1170.0023
GLN 1180.0052
HIS 1190.0057
ALA 1200.0053
MET 1210.0055
VAL 1220.0068
PHE 1230.0104
PHE 1240.0054
LYS 1250.0070
LYS 1260.0091
VAL 1270.0085
SER 1280.0105
GLN 1290.0133
ASN 1300.0207
ARG 1310.0047
GLU 1320.0106
TYR 1330.0095
PHE 1340.0111
LYS 1350.0076
ILE 1360.0082
THR 1370.0074
LEU 1380.0067
TYR 1390.0072
GLY 1400.0069
ARG 1410.0025
THR 1420.0053
LYS 1430.0102
GLU 1440.0085
LEU 1450.0042
THR 1460.0066
SER 1470.0195
GLU 1480.0084
LEU 1490.0130
LYS 1500.0156
GLU 1510.0139
ASN 1520.0160
PHE 1530.0144
ILE 1540.0150
ARG 1550.0122
PHE 1560.0073
SER 1570.0079
LYS 1580.0136
SER 1590.0135
LEU 1600.0087
GLY 1610.0138
LEU 1620.0129
PRO 1630.0141
GLU 1640.0149
ASN 1650.0238
HIS 1660.0135
ILE 1670.0094
VAL 1680.0076
PHE 1690.0048
PRO 1700.0052
VAL 1710.0058
PRO 1720.0073
ILE 1730.0104
ASP 1740.0168
GLN 1750.0162
CYS 1760.0105
ILE 1770.0088
ASP 1780.0224
GLY 1790.0127

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: december 26th, 2025.