CNRS Nantes University US2B US2B
home |  start a new run |  job status |  references&downloads |  examples |  help  

Should you encounter any unexpected behaviour,
please let us know.
 elNémo has been hacked on november 27th.
It has been moved away and runs again.
**Still some additional cleaning from time to time**
Sorry for the inconvenience.


***  TRANSPORT PROTEIN 23-FEB-99 1NGL  ***

<R2> analysis for 2604161210002404095

---  normal mode 24  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.0412
MET 10.0087
GLN 20.0048
ASP 30.0079
SER 40.0163
THR 50.0123
SER 60.0136
ASP 70.0070
LEU 80.0160
ILE 90.0137
PRO 100.0290
ALA 110.0216
PRO 120.0054
PRO 130.0099
LEU 140.0139
SER 150.0131
LYS 160.0080
VAL 170.0068
PRO 180.0046
LEU 190.0079
GLN 200.0098
GLN 210.0179
ASN 220.0188
PHE 230.0108
GLN 240.0099
ASP 250.0073
ASN 260.0046
GLN 270.0071
PHE 280.0062
GLN 290.0063
GLY 300.0105
LYS 310.0112
TRP 320.0091
TYR 330.0073
VAL 340.0059
VAL 350.0039
GLY 360.0044
LEU 370.0050
ALA 380.0034
GLY 390.0053
ASN 400.0080
ALA 410.0091
ILE 420.0069
LEU 430.0090
ARG 440.0085
GLU 450.0096
ASP 460.0186
LYS 470.0126
ASP 480.0208
PRO 490.0241
GLN 500.0183
LYS 510.0176
MET 520.0110
TYR 530.0095
ALA 540.0091
THR 550.0096
ILE 560.0092
TYR 570.0071
GLU 580.0074
LEU 590.0072
LYS 600.0142
GLU 610.0216
ASP 620.0239
LYS 630.0196
SER 640.0146
TYR 650.0082
ASN 660.0080
VAL 670.0066
THR 680.0097
SER 690.0101
VAL 700.0103
LEU 710.0102
PHE 720.0108
ARG 730.0108
LYS 740.0137
LYS 750.0162
LYS 760.0217
CYS 770.0093
ASP 780.0063
TYR 790.0095
TRP 800.0096
ILE 810.0088
ARG 820.0068
THR 830.0082
PHE 840.0080
VAL 850.0129
PRO 860.0146
GLY 870.0188
CYS 880.0275
GLN 890.0222
PRO 900.0145
GLY 910.0106
GLU 920.0103
PHE 930.0087
THR 940.0104
LEU 950.0095
GLY 960.0166
ASN 970.0180
ILE 980.0132
LYS 990.0399
SER 1000.0284
TYR 1010.0218
PRO 1020.0412
GLY 1030.0192
LEU 1040.0150
THR 1050.0183
SER 1060.0108
TYR 1070.0076
LEU 1080.0040
VAL 1090.0040
ARG 1100.0048
VAL 1110.0051
VAL 1120.0062
SER 1130.0073
THR 1140.0082
ASN 1150.0114
TYR 1160.0126
ASN 1170.0174
GLN 1180.0141
HIS 1190.0089
ALA 1200.0065
MET 1210.0049
VAL 1220.0054
PHE 1230.0059
PHE 1240.0056
LYS 1250.0060
LYS 1260.0064
VAL 1270.0126
SER 1280.0191
GLN 1290.0338
ASN 1300.0394
ARG 1310.0270
GLU 1320.0144
TYR 1330.0131
PHE 1340.0094
LYS 1350.0067
ILE 1360.0049
THR 1370.0039
LEU 1380.0031
TYR 1390.0052
GLY 1400.0075
ARG 1410.0113
THR 1420.0146
LYS 1430.0136
GLU 1440.0115
LEU 1450.0103
THR 1460.0118
SER 1470.0192
GLU 1480.0274
LEU 1490.0145
LYS 1500.0170
GLU 1510.0249
ASN 1520.0210
PHE 1530.0110
ILE 1540.0148
ARG 1550.0204
PHE 1560.0126
SER 1570.0066
LYS 1580.0110
SER 1590.0112
LEU 1600.0054
GLY 1610.0036
LEU 1620.0078
PRO 1630.0105
GLU 1640.0072
ASN 1650.0042
HIS 1660.0048
ILE 1670.0037
VAL 1680.0074
PHE 1690.0102
PRO 1700.0139
VAL 1710.0116
PRO 1720.0149
ILE 1730.0113
ASP 1740.0123
GLN 1750.0105
CYS 1760.0137
ILE 1770.0153
ASP 1780.0172
GLY 1790.0253

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: december 26th, 2025.