CNRS Nantes University US2B US2B
home |  start a new run |  job status |  references&downloads |  examples |  help  

Should you encounter any unexpected behaviour,
please let us know.
 elNémo has been hacked on november 27th.
It has been moved away and runs again.
**Still some additional cleaning from time to time**
Sorry for the inconvenience.


***  TRANSPORT PROTEIN 23-FEB-99 1NGL  ***

<R2> analysis for 2604161210002404095

---  normal mode 29  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.0481
MET 10.0132
GLN 20.0132
ASP 30.0333
SER 40.0262
THR 50.0313
SER 60.0279
ASP 70.0309
LEU 80.0318
ILE 90.0393
PRO 100.0322
ALA 110.0342
PRO 120.0226
PRO 130.0481
LEU 140.0458
SER 150.0350
LYS 160.0162
VAL 170.0135
PRO 180.0117
LEU 190.0048
GLN 200.0055
GLN 210.0094
ASN 220.0106
PHE 230.0075
GLN 240.0088
ASP 250.0094
ASN 260.0147
GLN 270.0118
PHE 280.0060
GLN 290.0059
GLY 300.0039
LYS 310.0065
TRP 320.0058
TYR 330.0053
VAL 340.0032
VAL 350.0019
GLY 360.0029
LEU 370.0026
ALA 380.0034
GLY 390.0069
ASN 400.0101
ALA 410.0125
ILE 420.0094
LEU 430.0130
ARG 440.0040
GLU 450.0039
ASP 460.0390
LYS 470.0308
ASP 480.0433
PRO 490.0420
GLN 500.0220
LYS 510.0211
MET 520.0093
TYR 530.0080
ALA 540.0094
THR 550.0078
ILE 560.0057
TYR 570.0017
GLU 580.0050
LEU 590.0110
LYS 600.0269
GLU 610.0390
ASP 620.0302
LYS 630.0127
SER 640.0113
TYR 650.0073
ASN 660.0089
VAL 670.0050
THR 680.0047
SER 690.0092
VAL 700.0129
LEU 710.0168
PHE 720.0186
ARG 730.0128
LYS 740.0144
LYS 750.0133
LYS 760.0151
CYS 770.0169
ASP 780.0143
TYR 790.0106
TRP 800.0052
ILE 810.0081
ARG 820.0120
THR 830.0122
PHE 840.0089
VAL 850.0086
PRO 860.0063
GLY 870.0098
CYS 880.0101
GLN 890.0084
PRO 900.0060
GLY 910.0067
GLU 920.0076
PHE 930.0074
THR 940.0093
LEU 950.0106
GLY 960.0104
ASN 970.0155
ILE 980.0102
LYS 990.0041
SER 1000.0171
TYR 1010.0198
PRO 1020.0346
GLY 1030.0222
LEU 1040.0114
THR 1050.0111
SER 1060.0051
TYR 1070.0057
LEU 1080.0068
VAL 1090.0070
ARG 1100.0051
VAL 1110.0040
VAL 1120.0036
SER 1130.0035
THR 1140.0019
ASN 1150.0013
TYR 1160.0028
ASN 1170.0042
GLN 1180.0036
HIS 1190.0014
ALA 1200.0015
MET 1210.0015
VAL 1220.0030
PHE 1230.0030
PHE 1240.0050
LYS 1250.0053
LYS 1260.0048
VAL 1270.0040
SER 1280.0077
GLN 1290.0207
ASN 1300.0243
ARG 1310.0151
GLU 1320.0065
TYR 1330.0083
PHE 1340.0072
LYS 1350.0054
ILE 1360.0034
THR 1370.0012
LEU 1380.0010
TYR 1390.0022
GLY 1400.0031
ARG 1410.0049
THR 1420.0080
LYS 1430.0132
GLU 1440.0100
LEU 1450.0058
THR 1460.0060
SER 1470.0048
GLU 1480.0043
LEU 1490.0029
LYS 1500.0025
GLU 1510.0041
ASN 1520.0050
PHE 1530.0026
ILE 1540.0021
ARG 1550.0056
PHE 1560.0058
SER 1570.0030
LYS 1580.0073
SER 1590.0056
LEU 1600.0089
GLY 1610.0132
LEU 1620.0168
PRO 1630.0200
GLU 1640.0259
ASN 1650.0113
HIS 1660.0060
ILE 1670.0056
VAL 1680.0033
PHE 1690.0045
PRO 1700.0125
VAL 1710.0085
PRO 1720.0134
ILE 1730.0072
ASP 1740.0066
GLN 1750.0067
CYS 1760.0143
ILE 1770.0133
ASP 1780.0092
GLY 1790.0132

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: december 26th, 2025.