CNRS Nantes University US2B US2B
home |  start a new run |  job status |  references&downloads |  examples |  help  

Should you encounter any unexpected behaviour,
please let us know.
 elNémo has been hacked on november 27th.
It has been moved away and runs again.
**Still some additional cleaning from time to time**
Sorry for the inconvenience.


***  TRANSPORT PROTEIN 23-FEB-99 1NGL  ***

<R2> analysis for 2604161210002404095

---  normal mode 33  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.0464
MET 10.0052
GLN 20.0126
ASP 30.0196
SER 40.0173
THR 50.0164
SER 60.0143
ASP 70.0168
LEU 80.0165
ILE 90.0136
PRO 100.0091
ALA 110.0139
PRO 120.0135
PRO 130.0164
LEU 140.0161
SER 150.0149
LYS 160.0144
VAL 170.0120
PRO 180.0073
LEU 190.0097
GLN 200.0110
GLN 210.0189
ASN 220.0208
PHE 230.0186
GLN 240.0213
ASP 250.0210
ASN 260.0227
GLN 270.0207
PHE 280.0152
GLN 290.0155
GLY 300.0088
LYS 310.0046
TRP 320.0066
TYR 330.0099
VAL 340.0085
VAL 350.0070
GLY 360.0087
LEU 370.0113
ALA 380.0104
GLY 390.0083
ASN 400.0055
ALA 410.0054
ILE 420.0105
LEU 430.0167
ARG 440.0177
GLU 450.0248
ASP 460.0464
LYS 470.0366
ASP 480.0387
PRO 490.0359
GLN 500.0205
LYS 510.0171
MET 520.0131
TYR 530.0104
ALA 540.0109
THR 550.0056
ILE 560.0080
TYR 570.0107
GLU 580.0167
LEU 590.0229
LYS 600.0263
GLU 610.0440
ASP 620.0284
LYS 630.0159
SER 640.0126
TYR 650.0158
ASN 660.0163
VAL 670.0144
THR 680.0115
SER 690.0092
VAL 700.0101
LEU 710.0182
PHE 720.0201
ARG 730.0178
LYS 740.0136
LYS 750.0207
LYS 760.0266
CYS 770.0225
ASP 780.0145
TYR 790.0089
TRP 800.0193
ILE 810.0221
ARG 820.0190
THR 830.0134
PHE 840.0103
VAL 850.0072
PRO 860.0072
GLY 870.0061
CYS 880.0076
GLN 890.0103
PRO 900.0133
GLY 910.0119
GLU 920.0115
PHE 930.0087
THR 940.0095
LEU 950.0102
GLY 960.0098
ASN 970.0081
ILE 980.0126
LYS 990.0182
SER 1000.0152
TYR 1010.0123
PRO 1020.0292
GLY 1030.0311
LEU 1040.0175
THR 1050.0154
SER 1060.0131
TYR 1070.0131
LEU 1080.0113
VAL 1090.0102
ARG 1100.0088
VAL 1110.0052
VAL 1120.0049
SER 1130.0055
THR 1140.0081
ASN 1150.0080
TYR 1160.0079
ASN 1170.0104
GLN 1180.0094
HIS 1190.0057
ALA 1200.0041
MET 1210.0020
VAL 1220.0038
PHE 1230.0071
PHE 1240.0076
LYS 1250.0096
LYS 1260.0109
VAL 1270.0106
SER 1280.0127
GLN 1290.0169
ASN 1300.0199
ARG 1310.0237
GLU 1320.0150
TYR 1330.0066
PHE 1340.0053
LYS 1350.0055
ILE 1360.0069
THR 1370.0059
LEU 1380.0056
TYR 1390.0058
GLY 1400.0070
ARG 1410.0076
THR 1420.0141
LYS 1430.0159
GLU 1440.0211
LEU 1450.0079
THR 1460.0061
SER 1470.0083
GLU 1480.0085
LEU 1490.0055
LYS 1500.0061
GLU 1510.0123
ASN 1520.0128
PHE 1530.0100
ILE 1540.0143
ARG 1550.0183
PHE 1560.0157
SER 1570.0159
LYS 1580.0171
SER 1590.0153
LEU 1600.0146
GLY 1610.0146
LEU 1620.0152
PRO 1630.0159
GLU 1640.0151
ASN 1650.0122
HIS 1660.0132
ILE 1670.0134
VAL 1680.0142
PHE 1690.0107
PRO 1700.0141
VAL 1710.0099
PRO 1720.0132
ILE 1730.0170
ASP 1740.0188
GLN 1750.0219
CYS 1760.0220
ILE 1770.0253
ASP 1780.0323
GLY 1790.0295

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: december 26th, 2025.