CNRS Nantes University US2B US2B
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Should you encounter any unexpected behaviour,
please let us know.
 elNémo has been hacked on november 27th.
It has been moved away and runs again.
**Still some additional cleaning from time to time**
Sorry for the inconvenience.


***  TRANSPORT PROTEIN 23-FEB-99 1NGL  ***

<R2> analysis for 2604161210002404095

---  normal mode 52  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.0596
MET 10.0182
GLN 20.0195
ASP 30.0146
SER 40.0132
THR 50.0090
SER 60.0102
ASP 70.0111
LEU 80.0099
ILE 90.0276
PRO 100.0357
ALA 110.0596
PRO 120.0240
PRO 130.0335
LEU 140.0401
SER 150.0315
LYS 160.0200
VAL 170.0266
PRO 180.0248
LEU 190.0198
GLN 200.0155
GLN 210.0163
ASN 220.0140
PHE 230.0054
GLN 240.0108
ASP 250.0106
ASN 260.0118
GLN 270.0096
PHE 280.0032
GLN 290.0065
GLY 300.0038
LYS 310.0026
TRP 320.0016
TYR 330.0033
VAL 340.0038
VAL 350.0021
GLY 360.0045
LEU 370.0066
ALA 380.0085
GLY 390.0118
ASN 400.0171
ALA 410.0240
ILE 420.0145
LEU 430.0175
ARG 440.0140
GLU 450.0303
ASP 460.0265
LYS 470.0154
ASP 480.0210
PRO 490.0146
GLN 500.0084
LYS 510.0091
MET 520.0030
TYR 530.0020
ALA 540.0010
THR 550.0027
ILE 560.0053
TYR 570.0048
GLU 580.0073
LEU 590.0101
LYS 600.0086
GLU 610.0147
ASP 620.0155
LYS 630.0154
SER 640.0087
TYR 650.0058
ASN 660.0049
VAL 670.0056
THR 680.0057
SER 690.0052
VAL 700.0025
LEU 710.0039
PHE 720.0054
ARG 730.0072
LYS 740.0077
LYS 750.0115
LYS 760.0095
CYS 770.0053
ASP 780.0043
TYR 790.0037
TRP 800.0029
ILE 810.0036
ARG 820.0082
THR 830.0077
PHE 840.0052
VAL 850.0058
PRO 860.0085
GLY 870.0084
CYS 880.0245
GLN 890.0188
PRO 900.0108
GLY 910.0064
GLU 920.0047
PHE 930.0050
THR 940.0060
LEU 950.0109
GLY 960.0214
ASN 970.0271
ILE 980.0163
LYS 990.0285
SER 1000.0380
TYR 1010.0175
PRO 1020.0209
GLY 1030.0232
LEU 1040.0058
THR 1050.0085
SER 1060.0055
TYR 1070.0027
LEU 1080.0034
VAL 1090.0052
ARG 1100.0110
VAL 1110.0145
VAL 1120.0176
SER 1130.0175
THR 1140.0162
ASN 1150.0183
TYR 1160.0114
ASN 1170.0188
GLN 1180.0178
HIS 1190.0113
ALA 1200.0123
MET 1210.0136
VAL 1220.0129
PHE 1230.0131
PHE 1240.0081
LYS 1250.0095
LYS 1260.0123
VAL 1270.0179
SER 1280.0191
GLN 1290.0149
ASN 1300.0117
ARG 1310.0063
GLU 1320.0241
TYR 1330.0264
PHE 1340.0163
LYS 1350.0111
ILE 1360.0105
THR 1370.0093
LEU 1380.0078
TYR 1390.0052
GLY 1400.0072
ARG 1410.0048
THR 1420.0079
LYS 1430.0280
GLU 1440.0151
LEU 1450.0200
THR 1460.0290
SER 1470.0292
GLU 1480.0136
LEU 1490.0073
LYS 1500.0092
GLU 1510.0153
ASN 1520.0103
PHE 1530.0086
ILE 1540.0147
ARG 1550.0191
PHE 1560.0133
SER 1570.0143
LYS 1580.0099
SER 1590.0111
LEU 1600.0166
GLY 1610.0108
LEU 1620.0097
PRO 1630.0105
GLU 1640.0113
ASN 1650.0100
HIS 1660.0098
ILE 1670.0091
VAL 1680.0064
PHE 1690.0055
PRO 1700.0020
VAL 1710.0026
PRO 1720.0106
ILE 1730.0086
ASP 1740.0070
GLN 1750.0047
CYS 1760.0072
ILE 1770.0130
ASP 1780.0172
GLY 1790.0114

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: december 26th, 2025.