CNRS Nantes University US2B US2B
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Should you encounter any unexpected behaviour,
please let us know.
 elNémo has been hacked on november 27th.
It has been moved away and runs again.
**Still some additional cleaning from time to time**
Sorry for the inconvenience.


***  TRANSPORT PROTEIN 23-FEB-99 1NGL  ***

<R2> analysis for 2604161210002404095

---  normal mode 59  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.0914
MET 10.0797
GLN 20.0914
ASP 30.0499
SER 40.0483
THR 50.0769
SER 60.0338
ASP 70.0153
LEU 80.0210
ILE 90.0089
PRO 100.0189
ALA 110.0064
PRO 120.0081
PRO 130.0084
LEU 140.0032
SER 150.0055
LYS 160.0023
VAL 170.0029
PRO 180.0053
LEU 190.0051
GLN 200.0040
GLN 210.0045
ASN 220.0017
PHE 230.0021
GLN 240.0017
ASP 250.0006
ASN 260.0008
GLN 270.0016
PHE 280.0016
GLN 290.0013
GLY 300.0013
LYS 310.0010
TRP 320.0015
TYR 330.0024
VAL 340.0023
VAL 350.0028
GLY 360.0026
LEU 370.0028
ALA 380.0018
GLY 390.0008
ASN 400.0013
ALA 410.0025
ILE 420.0021
LEU 430.0048
ARG 440.0030
GLU 450.0036
ASP 460.0016
LYS 470.0013
ASP 480.0031
PRO 490.0022
GLN 500.0022
LYS 510.0029
MET 520.0015
TYR 530.0011
ALA 540.0011
THR 550.0004
ILE 560.0007
TYR 570.0008
GLU 580.0018
LEU 590.0021
LYS 600.0027
GLU 610.0023
ASP 620.0043
LYS 630.0027
SER 640.0021
TYR 650.0016
ASN 660.0020
VAL 670.0012
THR 680.0012
SER 690.0009
VAL 700.0009
LEU 710.0021
PHE 720.0031
ARG 730.0058
LYS 740.0049
LYS 750.0048
LYS 760.0051
CYS 770.0027
ASP 780.0024
TYR 790.0008
TRP 800.0027
ILE 810.0027
ARG 820.0017
THR 830.0017
PHE 840.0015
VAL 850.0012
PRO 860.0021
GLY 870.0035
CYS 880.0120
GLN 890.0067
PRO 900.0022
GLY 910.0031
GLU 920.0042
PHE 930.0023
THR 940.0018
LEU 950.0029
GLY 960.0045
ASN 970.0055
ILE 980.0029
LYS 990.0031
SER 1000.0112
TYR 1010.0048
PRO 1020.0060
GLY 1030.0027
LEU 1040.0025
THR 1050.0024
SER 1060.0031
TYR 1070.0029
LEU 1080.0024
VAL 1090.0019
ARG 1100.0025
VAL 1110.0027
VAL 1120.0030
SER 1130.0032
THR 1140.0029
ASN 1150.0030
TYR 1160.0031
ASN 1170.0038
GLN 1180.0028
HIS 1190.0022
ALA 1200.0022
MET 1210.0018
VAL 1220.0013
PHE 1230.0014
PHE 1240.0012
LYS 1250.0021
LYS 1260.0029
VAL 1270.0031
SER 1280.0024
GLN 1290.0003
ASN 1300.0022
ARG 1310.0028
GLU 1320.0030
TYR 1330.0022
PHE 1340.0012
LYS 1350.0011
ILE 1360.0009
THR 1370.0014
LEU 1380.0020
TYR 1390.0019
GLY 1400.0023
ARG 1410.0024
THR 1420.0030
LYS 1430.0035
GLU 1440.0025
LEU 1450.0019
THR 1460.0023
SER 1470.0049
GLU 1480.0033
LEU 1490.0014
LYS 1500.0028
GLU 1510.0022
ASN 1520.0015
PHE 1530.0020
ILE 1540.0018
ARG 1550.0034
PHE 1560.0010
SER 1570.0006
LYS 1580.0031
SER 1590.0011
LEU 1600.0040
GLY 1610.0041
LEU 1620.0050
PRO 1630.0106
GLU 1640.0121
ASN 1650.0029
HIS 1660.0016
ILE 1670.0019
VAL 1680.0020
PHE 1690.0029
PRO 1700.0026
VAL 1710.0027
PRO 1720.0047
ILE 1730.0045
ASP 1740.0035
GLN 1750.0037
CYS 1760.0029
ILE 1770.0043
ASP 1780.0067
GLY 1790.0057

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: december 26th, 2025.