Should you encounter any unexpected behaviour,
please let us know.
elNémo has been hacked on november 27th.
It has been moved away and runs again.
Still some additional cleaning from time to time
Sorry for the inconvenience.

* TRANSPORT PROTEIN 23-FEB-99 1NGL *

CA distance fluctuations for 2604161210002404095

--- normal mode 8 ---

This matrix displays the maximum distance fluctuations between all pairs of CA atoms and between the two extreme conformations that were computed for this mode (DQMIN/DQMAX). Distance increases are plotted in blue and decreases in red for the strongest 10% of the residue pair distance changes. Every pixel corresponds to a single residue. Grey lines are drawn every 10 residues, yellow lines every 100 residues (counting from the upper left corner).

The following table indicates for every residue the two corresponding residues with the strongest CA distance fluctuations.

[HELP on distance fluctuations]

GD ok

largest increase ref largest decrease
PRO 10 0.12 MET 1 -0.88 ASP 46

PRO 10 0.24 GLN 2 -0.74 LYS 47

PRO 10 0.18 ASP 3 -0.46 LYS 47

LEU 8 0.13 SER 4 -0.23 ASN 165

PRO 10 0.07 THR 5 -0.28 ASN 165

PRO 10 0.06 SER 6 -0.21 PRO 163

PRO 10 0.16 ASP 7 -0.35 GLU 164

GLN 2 0.15 LEU 8 -0.15 GLU 164

GLN 2 0.13 ILE 9 -0.07 GLU 164

GLN 2 0.24 PRO 10 -0.06 GLU 164

GLN 2 0.19 ALA 11 -0.04 GLU 132

GLN 2 0.09 PRO 12 -0.01 ASN 40

GLN 2 0.12 PRO 13 -0.01 GLU 132

GLN 2 0.06 LEU 14 -0.04 MET 1

SER 4 0.06 SER 15 -0.07 MET 1

LEU 8 0.04 LYS 16 -0.15 MET 1

ILE 9 0.02 VAL 17 -0.12 MET 1

LEU 8 0.03 PRO 18 -0.11 MET 1

LEU 8 0.02 LEU 19 -0.12 MET 1

LEU 8 0.03 GLN 20 -0.14 MET 1

LEU 8 0.03 GLN 21 -0.10 MET 1

LEU 8 0.02 ASN 22 -0.10 MET 1

LEU 8 0.02 PHE 23 -0.14 MET 1

LEU 8 0.02 GLN 24 -0.15 MET 1

ILE 9 0.01 ASP 25 -0.17 MET 1

LEU 8 0.01 ASN 26 -0.17 MET 1

LEU 8 0.02 GLN 27 -0.19 MET 1

LEU 8 0.01 PHE 28 -0.20 MET 1

ILE 9 0.01 GLN 29 -0.23 MET 1

LEU 8 0.01 GLY 30 -0.26 MET 1

ILE 9 0.01 LYS 31 -0.30 MET 1

LEU 8 0.01 TRP 32 -0.33 MET 1

LEU 8 0.01 TYR 33 -0.38 MET 1

SER 15 0.00 VAL 34 -0.41 MET 1

LEU 8 0.01 VAL 35 -0.43 MET 1

ILE 9 0.00 GLY 36 -0.45 MET 1

SER 159 0.00 LEU 37 -0.45 MET 1

LYS 158 0.00 ALA 38 -0.43 MET 1

LYS 158 0.00 GLY 39 -0.38 MET 1

LYS 158 0.00 ASN 40 -0.37 GLN 2

ILE 42 0.00 ALA 41 -0.43 GLN 2

LYS 158 0.00 ILE 42 -0.48 MET 1

ARG 131 0.00 LEU 43 -0.59 MET 1

ARG 131 0.00 ARG 44 -0.67 MET 1

GLU 151 0.00 GLU 45 -0.80 MET 1

GLU 151 0.00 ASP 46 -0.88 MET 1

ASN 130 0.00 LYS 47 -0.86 MET 1

ARG 131 0.00 ASP 48 -0.74 MET 1

ARG 131 0.00 PRO 49 -0.70 MET 1

ARG 131 0.00 GLN 50 -0.60 MET 1

GLY 103 0.00 LYS 51 -0.56 MET 1

GLY 103 0.00 MET 52 -0.49 MET 1

GLY 103 0.00 TYR 53 -0.44 MET 1

SER 15 0.00 ALA 54 -0.39 MET 1

SER 15 0.00 THR 55 -0.34 MET 1

SER 15 0.00 ILE 56 -0.30 MET 1

SER 15 0.01 TYR 57 -0.26 MET 1

SER 15 0.00 GLU 58 -0.24 MET 1

SER 15 0.01 LEU 59 -0.20 MET 1

SER 15 0.00 LYS 60 -0.19 MET 1

SER 15 0.00 GLU 61 -0.16 MET 1

SER 15 0.00 ASP 62 -0.15 MET 1

SER 15 0.00 LYS 63 -0.14 MET 1

SER 15 0.00 SER 64 -0.17 MET 1

SER 15 0.00 TYR 65 -0.21 MET 1

SER 15 0.00 ASN 66 -0.24 MET 1

SER 15 0.00 VAL 67 -0.27 MET 1

SER 15 0.00 THR 68 -0.31 MET 1

GLY 103 0.00 SER 69 -0.35 MET 1

GLY 103 0.00 VAL 70 -0.38 MET 1

GLY 103 0.00 LEU 71 -0.43 MET 1

GLY 103 0.00 PHE 72 -0.46 MET 1

GLY 103 0.00 ARG 73 -0.47 MET 1

GLY 103 0.00 LYS 74 -0.49 MET 1

ILE 177 0.00 LYS 75 -0.45 MET 1

ILE 177 0.00 LYS 76 -0.42 MET 1

GLY 103 0.00 CYS 77 -0.41 MET 1

GLY 103 0.00 ASP 78 -0.38 MET 1

GLY 103 0.00 TYR 79 -0.35 MET 1

GLY 103 0.00 TRP 80 -0.34 MET 1

GLY 103 0.00 ILE 81 -0.30 MET 1

GLY 103 0.00 ARG 82 -0.28 MET 1

SER 15 0.00 THR 83 -0.24 MET 1

SER 15 0.00 PHE 84 -0.21 MET 1

SER 15 0.00 VAL 85 -0.17 MET 1

SER 15 0.00 PRO 86 -0.14 MET 1

SER 15 0.00 GLY 87 -0.10 MET 1

PRO 13 0.00 CYS 88 -0.07 MET 1

ILE 9 0.01 GLN 89 -0.08 MET 1

ILE 9 0.01 PRO 90 -0.11 MET 1

ILE 9 0.01 GLY 91 -0.12 MET 1

PRO 13 0.00 GLU 92 -0.12 MET 1

SER 15 0.00 PHE 93 -0.15 MET 1

SER 15 0.00 THR 94 -0.17 MET 1

LYS 51 0.00 LEU 95 -0.21 MET 1

LYS 51 0.00 GLY 96 -0.22 GLN 2

LYS 51 0.00 ASN 97 -0.19 GLN 2

LYS 51 0.00 ILE 98 -0.19 GLN 2

LYS 51 0.00 LYS 99 -0.15 GLN 2

LYS 51 0.00 SER 100 -0.18 GLN 2

LYS 51 0.00 TYR 101 -0.22 GLN 2

LYS 51 0.00 PRO 102 -0.24 GLN 2

LYS 51 0.00 GLY 103 -0.28 GLN 2

LYS 51 0.00 LEU 104 -0.25 GLN 2

ASP 48 0.00 THR 105 -0.21 GLN 2

ASP 48 0.00 SER 106 -0.18 GLN 2

LYS 51 0.00 TYR 107 -0.19 GLN 2

ASP 48 0.00 LEU 108 -0.16 MET 1

SER 15 0.00 VAL 109 -0.19 MET 1

SER 15 0.00 ARG 110 -0.17 MET 1

ILE 9 0.01 VAL 111 -0.20 MET 1

LEU 8 0.02 VAL 112 -0.18 MET 1

LEU 8 0.04 SER 113 -0.18 MET 1

LEU 8 0.03 THR 114 -0.22 MET 1

LEU 8 0.05 ASN 115 -0.23 MET 1

LEU 8 0.04 TYR 116 -0.25 MET 1

LEU 8 0.04 ASN 117 -0.25 MET 1

LEU 8 0.05 GLN 118 -0.29 MET 1

LEU 8 0.04 HIS 119 -0.30 MET 1

LEU 8 0.03 ALA 120 -0.27 MET 1

LEU 8 0.02 MET 121 -0.27 MET 1

ILE 9 0.01 VAL 122 -0.26 MET 1

LYS 16 0.00 PHE 123 -0.23 MET 1

ASP 48 0.00 PHE 124 -0.25 MET 1

ASP 48 0.00 LYS 125 -0.20 MET 1

ASP 48 0.00 LYS 126 -0.23 GLN 2

ASP 48 0.00 VAL 127 -0.25 GLN 2

ASP 48 0.00 SER 128 -0.29 GLN 2

ASP 48 0.00 GLN 129 -0.26 GLN 2

ASP 48 0.00 ASN 130 -0.28 GLN 2

ASP 48 0.00 ARG 131 -0.32 GLN 2

LEU 43 0.00 GLU 132 -0.27 GLN 2

LEU 43 0.00 TYR 133 -0.31 GLN 2

ASP 48 0.00 PHE 134 -0.27 GLN 2

ASP 48 0.00 LYS 135 -0.33 MET 1

LYS 16 0.00 ILE 136 -0.31 MET 1

LYS 16 0.00 THR 137 -0.35 MET 1

LEU 8 0.01 LEU 138 -0.35 MET 1

LEU 8 0.01 TYR 139 -0.36 MET 1

LEU 8 0.02 GLY 140 -0.34 MET 1

LEU 8 0.02 ARG 141 -0.30 MET 1

LEU 8 0.03 THR 142 -0.31 MET 1

LEU 8 0.03 LYS 143 -0.34 MET 1

LEU 8 0.04 GLU 144 -0.35 MET 1

LEU 8 0.04 LEU 145 -0.35 MET 1

LEU 8 0.06 THR 146 -0.35 MET 1

LEU 8 0.06 SER 147 -0.40 MET 1

LEU 8 0.08 GLU 148 -0.37 MET 1

LEU 8 0.06 LEU 149 -0.37 MET 1

LEU 8 0.05 LYS 150 -0.45 MET 1

LEU 8 0.08 GLU 151 -0.43 MET 1

LEU 8 0.09 ASN 152 -0.35 MET 1

LEU 8 0.05 PHE 153 -0.37 MET 1

LEU 8 0.05 ILE 154 -0.43 MET 1

LEU 8 0.10 ARG 155 -0.35 MET 1

LEU 8 0.09 PHE 156 -0.27 MET 1

LEU 8 0.05 SER 157 -0.31 MET 1

LEU 8 0.06 LYS 158 -0.34 MET 1

LEU 8 0.14 SER 159 -0.21 MET 1

LEU 8 0.07 LEU 160 -0.16 MET 1

GLU 164 0.01 GLY 161 -0.24 MET 1

PRO 163 0.01 LEU 162 -0.30 MET 1

LEU 162 0.01 PRO 163 -0.46 MET 1

GLY 161 0.01 GLU 164 -0.36 MET 1

LYS 158 0.01 ASN 165 -0.47 MET 1

ILE 167 0.01 HIS 166 -0.55 MET 1

LYS 158 0.01 ILE 167 -0.48 MET 1

ILE 154 0.00 VAL 168 -0.55 MET 1

LEU 37 0.00 PHE 169 -0.53 MET 1

ASP 46 0.00 PRO 170 -0.61 MET 1

SER 128 0.00 VAL 171 -0.54 MET 1

LEU 8 0.00 PRO 172 -0.55 MET 1

LEU 8 0.01 ILE 173 -0.49 MET 1

LEU 8 0.00 ASP 174 -0.49 MET 1

LEU 8 0.01 GLN 175 -0.44 MET 1

SER 15 0.00 CYS 176 -0.42 MET 1

LEU 8 0.01 ILE 177 -0.39 MET 1

LEU 8 0.01 ASP 178 -0.42 MET 1

SER 15 0.00 GLY 179 -0.43 MET 1

If you find results from this site helpful for your research, please cite one of our papers:

K. Suhre & Y.H. Sanejouand, ElNemo: a normal mode web-server for protein movement analysis and the generation of templates for molecular replacement. Nucleic Acids Research, 32, W610-W614, 2004.
K. Suhre & Y.H. Sanejouand, On the potential of normal mode analysis for solving difficult molecular replacement problems. Acta Cryst. D vol.60, p796-799, 2004 © International Union of Crystallography.

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: december 26th, 2025.

Should you encounter any unexpected behaviour, please let us know. elNémo has been hacked on november 27th. It has been moved away and runs again. **Still some additional cleaning from time to time** Sorry for the inconvenience.

*** TRANSPORT PROTEIN 23-FEB-99 1NGL ***

CA distance fluctuations for 2604161210002404095

--- normal mode 8 ---

Should you encounter any unexpected behaviour,
please let us know.
elNémo has been hacked on november 27th.
It has been moved away and runs again.
Still some additional cleaning from time to time
Sorry for the inconvenience.

* TRANSPORT PROTEIN 23-FEB-99 1NGL *