CNRS Nantes University US2B US2B
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Should you encounter any unexpected behaviour,
please let us know.
 elNémo has been hacked on november 27th.
It has been moved away and runs again.
**Still some additional cleaning from time to time**
Sorry for the inconvenience.


***  TRANSPORT PROTEIN 23-FEB-99 1NGL  ***

<R2> analysis for 2604161210002404095

---  normal mode 88  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.0896
MET 10.0079
GLN 20.0063
ASP 30.0048
SER 40.0019
THR 50.0067
SER 60.0050
ASP 70.0039
LEU 80.0058
ILE 90.0030
PRO 100.0084
ALA 110.0133
PRO 120.0055
PRO 130.0145
LEU 140.0066
SER 150.0059
LYS 160.0056
VAL 170.0020
PRO 180.0069
LEU 190.0096
GLN 200.0129
GLN 210.0151
ASN 220.0316
PHE 230.0141
GLN 240.0117
ASP 250.0083
ASN 260.0094
GLN 270.0244
PHE 280.0048
GLN 290.0071
GLY 300.0048
LYS 310.0056
TRP 320.0065
TYR 330.0102
VAL 340.0058
VAL 350.0017
GLY 360.0074
LEU 370.0087
ALA 380.0079
GLY 390.0102
ASN 400.0196
ALA 410.0233
ILE 420.0139
LEU 430.0112
ARG 440.0051
GLU 450.0049
ASP 460.0072
LYS 470.0084
ASP 480.0084
PRO 490.0072
GLN 500.0042
LYS 510.0046
MET 520.0054
TYR 530.0069
ALA 540.0080
THR 550.0074
ILE 560.0074
TYR 570.0049
GLU 580.0051
LEU 590.0062
LYS 600.0082
GLU 610.0117
ASP 620.0119
LYS 630.0056
SER 640.0044
TYR 650.0066
ASN 660.0040
VAL 670.0073
THR 680.0105
SER 690.0102
VAL 700.0085
LEU 710.0094
PHE 720.0098
ARG 730.0100
LYS 740.0181
LYS 750.0248
LYS 760.0047
CYS 770.0034
ASP 780.0095
TYR 790.0067
TRP 800.0073
ILE 810.0083
ARG 820.0079
THR 830.0040
PHE 840.0023
VAL 850.0084
PRO 860.0147
GLY 870.0110
CYS 880.0896
GLN 890.0802
PRO 900.0408
GLY 910.0223
GLU 920.0222
PHE 930.0047
THR 940.0034
LEU 950.0038
GLY 960.0035
ASN 970.0087
ILE 980.0049
LYS 990.0091
SER 1000.0058
TYR 1010.0070
PRO 1020.0158
GLY 1030.0236
LEU 1040.0094
THR 1050.0101
SER 1060.0092
TYR 1070.0086
LEU 1080.0091
VAL 1090.0050
ARG 1100.0027
VAL 1110.0073
VAL 1120.0070
SER 1130.0102
THR 1140.0107
ASN 1150.0075
TYR 1160.0033
ASN 1170.0080
GLN 1180.0119
HIS 1190.0069
ALA 1200.0064
MET 1210.0051
VAL 1220.0040
PHE 1230.0050
PHE 1240.0043
LYS 1250.0052
LYS 1260.0074
VAL 1270.0077
SER 1280.0101
GLN 1290.0124
ASN 1300.0145
ARG 1310.0102
GLU 1320.0137
TYR 1330.0131
PHE 1340.0040
LYS 1350.0048
ILE 1360.0068
THR 1370.0044
LEU 1380.0039
TYR 1390.0046
GLY 1400.0087
ARG 1410.0075
THR 1420.0154
LYS 1430.0324
GLU 1440.0197
LEU 1450.0115
THR 1460.0100
SER 1470.0187
GLU 1480.0175
LEU 1490.0173
LYS 1500.0194
GLU 1510.0128
ASN 1520.0125
PHE 1530.0176
ILE 1540.0148
ARG 1550.0108
PHE 1560.0216
SER 1570.0106
LYS 1580.0125
SER 1590.0140
LEU 1600.0075
GLY 1610.0069
LEU 1620.0078
PRO 1630.0188
GLU 1640.0255
ASN 1650.0113
HIS 1660.0094
ILE 1670.0067
VAL 1680.0120
PHE 1690.0162
PRO 1700.0100
VAL 1710.0047
PRO 1720.0074
ILE 1730.0186
ASP 1740.0124
GLN 1750.0132
CYS 1760.0102
ILE 1770.0248
ASP 1780.0226
GLY 1790.0189

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: december 26th, 2025.