CNRS Nantes University US2B US2B
home |  start a new run |  job status |  references&downloads |  examples |  help  

Should you encounter any unexpected behaviour,
please let us know.
 elNémo has been hacked on november 27th.
It has been moved away and runs again.
**Still some additional cleaning from time to time**
Sorry for the inconvenience.


***  TRANSPORT PROTEIN 23-FEB-99 1NGL  ***

<R2> analysis for 2604161210002404095

---  normal mode 92  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.0571
MET 10.0472
GLN 20.0327
ASP 30.0469
SER 40.0283
THR 50.0571
SER 60.0304
ASP 70.0203
LEU 80.0266
ILE 90.0370
PRO 100.0469
ALA 110.0176
PRO 120.0086
PRO 130.0036
LEU 140.0040
SER 150.0028
LYS 160.0058
VAL 170.0066
PRO 180.0066
LEU 190.0077
GLN 200.0091
GLN 210.0116
ASN 220.0245
PHE 230.0078
GLN 240.0108
ASP 250.0084
ASN 260.0056
GLN 270.0033
PHE 280.0038
GLN 290.0042
GLY 300.0044
LYS 310.0051
TRP 320.0053
TYR 330.0083
VAL 340.0059
VAL 350.0028
GLY 360.0069
LEU 370.0063
ALA 380.0052
GLY 390.0065
ASN 400.0096
ALA 410.0159
ILE 420.0066
LEU 430.0037
ARG 440.0029
GLU 450.0071
ASP 460.0144
LYS 470.0228
ASP 480.0133
PRO 490.0124
GLN 500.0047
LYS 510.0093
MET 520.0106
TYR 530.0084
ALA 540.0061
THR 550.0050
ILE 560.0057
TYR 570.0029
GLU 580.0036
LEU 590.0072
LYS 600.0100
GLU 610.0037
ASP 620.0060
LYS 630.0021
SER 640.0025
TYR 650.0038
ASN 660.0024
VAL 670.0056
THR 680.0071
SER 690.0050
VAL 700.0066
LEU 710.0087
PHE 720.0058
ARG 730.0078
LYS 740.0093
LYS 750.0053
LYS 760.0041
CYS 770.0058
ASP 780.0055
TYR 790.0076
TRP 800.0088
ILE 810.0101
ARG 820.0094
THR 830.0023
PHE 840.0021
VAL 850.0031
PRO 860.0064
GLY 870.0050
CYS 880.0215
GLN 890.0262
PRO 900.0142
GLY 910.0059
GLU 920.0061
PHE 930.0011
THR 940.0042
LEU 950.0072
GLY 960.0019
ASN 970.0085
ILE 980.0024
LYS 990.0082
SER 1000.0054
TYR 1010.0048
PRO 1020.0068
GLY 1030.0065
LEU 1040.0076
THR 1050.0073
SER 1060.0095
TYR 1070.0108
LEU 1080.0084
VAL 1090.0050
ARG 1100.0043
VAL 1110.0054
VAL 1120.0073
SER 1130.0088
THR 1140.0072
ASN 1150.0070
TYR 1160.0034
ASN 1170.0086
GLN 1180.0059
HIS 1190.0044
ALA 1200.0055
MET 1210.0046
VAL 1220.0031
PHE 1230.0019
PHE 1240.0040
LYS 1250.0045
LYS 1260.0077
VAL 1270.0052
SER 1280.0046
GLN 1290.0057
ASN 1300.0101
ARG 1310.0097
GLU 1320.0147
TYR 1330.0129
PHE 1340.0063
LYS 1350.0049
ILE 1360.0025
THR 1370.0029
LEU 1380.0023
TYR 1390.0024
GLY 1400.0051
ARG 1410.0046
THR 1420.0081
LYS 1430.0189
GLU 1440.0180
LEU 1450.0112
THR 1460.0212
SER 1470.0229
GLU 1480.0074
LEU 1490.0057
LYS 1500.0098
GLU 1510.0141
ASN 1520.0160
PHE 1530.0146
ILE 1540.0110
ARG 1550.0093
PHE 1560.0164
SER 1570.0054
LYS 1580.0080
SER 1590.0098
LEU 1600.0069
GLY 1610.0088
LEU 1620.0148
PRO 1630.0151
GLU 1640.0103
ASN 1650.0099
HIS 1660.0050
ILE 1670.0029
VAL 1680.0061
PHE 1690.0111
PRO 1700.0070
VAL 1710.0085
PRO 1720.0101
ILE 1730.0215
ASP 1740.0061
GLN 1750.0097
CYS 1760.0043
ILE 1770.0274
ASP 1780.0221
GLY 1790.0258

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: december 26th, 2025.