CNRS Nantes University US2B US2B
home |  start a new run |  job status |  references&downloads |  examples |  help  

Should you encounter any unexpected behaviour,
please let us know.
 elNémo has been hacked on november 27th.
It has been moved away and runs again.
**Still some additional cleaning from time to time**
Sorry for the inconvenience.


***  TRANSPORT PROTEIN 23-FEB-99 1NGL  ***

<R2> analysis for 2604161210002404095

---  normal mode 96  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.0450
MET 10.0067
GLN 20.0157
ASP 30.0124
SER 40.0127
THR 50.0270
SER 60.0172
ASP 70.0366
LEU 80.0442
ILE 90.0227
PRO 100.0168
ALA 110.0143
PRO 120.0093
PRO 130.0113
LEU 140.0080
SER 150.0071
LYS 160.0018
VAL 170.0085
PRO 180.0153
LEU 190.0112
GLN 200.0112
GLN 210.0225
ASN 220.0450
PHE 230.0078
GLN 240.0174
ASP 250.0209
ASN 260.0300
GLN 270.0241
PHE 280.0126
GLN 290.0230
GLY 300.0183
LYS 310.0159
TRP 320.0120
TYR 330.0110
VAL 340.0106
VAL 350.0069
GLY 360.0085
LEU 370.0140
ALA 380.0122
GLY 390.0153
ASN 400.0122
ALA 410.0177
ILE 420.0158
LEU 430.0111
ARG 440.0059
GLU 450.0112
ASP 460.0095
LYS 470.0114
ASP 480.0039
PRO 490.0064
GLN 500.0114
LYS 510.0184
MET 520.0161
TYR 530.0141
ALA 540.0121
THR 550.0119
ILE 560.0165
TYR 570.0121
GLU 580.0168
LEU 590.0118
LYS 600.0080
GLU 610.0143
ASP 620.0110
LYS 630.0117
SER 640.0127
TYR 650.0036
ASN 660.0056
VAL 670.0082
THR 680.0127
SER 690.0095
VAL 700.0077
LEU 710.0149
PHE 720.0074
ARG 730.0144
LYS 740.0161
LYS 750.0246
LYS 760.0101
CYS 770.0051
ASP 780.0106
TYR 790.0091
TRP 800.0092
ILE 810.0096
ARG 820.0118
THR 830.0044
PHE 840.0052
VAL 850.0133
PRO 860.0171
GLY 870.0121
CYS 880.0207
GLN 890.0205
PRO 900.0249
GLY 910.0156
GLU 920.0157
PHE 930.0112
THR 940.0127
LEU 950.0133
GLY 960.0091
ASN 970.0190
ILE 980.0155
LYS 990.0272
SER 1000.0250
TYR 1010.0196
PRO 1020.0156
GLY 1030.0213
LEU 1040.0087
THR 1050.0115
SER 1060.0149
TYR 1070.0192
LEU 1080.0242
VAL 1090.0178
ARG 1100.0214
VAL 1110.0073
VAL 1120.0062
SER 1130.0041
THR 1140.0108
ASN 1150.0141
TYR 1160.0119
ASN 1170.0146
GLN 1180.0094
HIS 1190.0077
ALA 1200.0088
MET 1210.0024
VAL 1220.0059
PHE 1230.0144
PHE 1240.0164
LYS 1250.0217
LYS 1260.0184
VAL 1270.0107
SER 1280.0121
GLN 1290.0128
ASN 1300.0351
ARG 1310.0268
GLU 1320.0205
TYR 1330.0104
PHE 1340.0146
LYS 1350.0153
ILE 1360.0107
THR 1370.0089
LEU 1380.0039
TYR 1390.0090
GLY 1400.0109
ARG 1410.0124
THR 1420.0114
LYS 1430.0138
GLU 1440.0141
LEU 1450.0075
THR 1460.0111
SER 1470.0072
GLU 1480.0173
LEU 1490.0150
LYS 1500.0182
GLU 1510.0160
ASN 1520.0181
PHE 1530.0160
ILE 1540.0168
ARG 1550.0063
PHE 1560.0220
SER 1570.0099
LYS 1580.0099
SER 1590.0105
LEU 1600.0074
GLY 1610.0079
LEU 1620.0083
PRO 1630.0148
GLU 1640.0108
ASN 1650.0105
HIS 1660.0133
ILE 1670.0121
VAL 1680.0143
PHE 1690.0132
PRO 1700.0089
VAL 1710.0126
PRO 1720.0157
ILE 1730.0241
ASP 1740.0151
GLN 1750.0220
CYS 1760.0248
ILE 1770.0415
ASP 1780.0357
GLY 1790.0177

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: december 26th, 2025.