CNRS Nantes University US2B US2B
home |  start a new run |  job status |  references&downloads |  examples |  help  

Should you encounter any unexpected behaviour,
please let us know.
elNémo has been hacked on november 27th.
It has been moved away and runs again.
**Still some additional cleaning from time to time**
Sorry for the inconvenience.


***  TRANSFERASE 03-MAR-16 5IKO  ***

<R2> analysis for 2604162137592596707

---  normal mode 12  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.0516
LEU 210.0305
GLY 220.0313
ASP 230.0256
VAL 240.0281
ALA 250.0328
GLU 260.0286
VAL 270.0248
ARG 280.0301
LYS 290.0328
SER 300.0278
PHE 310.0266
ASN 320.0333
ARG 330.0339
HIS 340.0285
LEU 350.0304
HIS 360.0391
PHE 370.0393
THR 380.0318
LEU 390.0292
VAL 400.0374
LYS 410.0366
ASP 420.0408
ARG 430.0395
ASN 440.0433
VAL 450.0376
ALA 460.0295
THR 470.0243
PRO 480.0218
ARG 490.0147
ASP 500.0192
TYR 510.0198
PHE 520.0135
PHE 530.0132
ALA 540.0187
LEU 550.0153
ALA 560.0098
HIS 570.0132
THR 580.0140
VAL 590.0101
ARG 600.0108
ASP 610.0112
HIS 620.0093
LEU 630.0090
VAL 640.0115
GLY 650.0117
ARG 660.0070
TRP 670.0071
ILE 680.0074
ARG 690.0074
THR 700.0073
GLN 710.0041
GLN 720.0040
HIS 730.0046
TYR 740.0038
TYR 750.0025
GLU 760.0019
ARG 770.0029
ASP 780.0016
PRO 790.0024
LYS 800.0021
ARG 810.0012
ILE 820.0011
TYR 830.0017
TYR 840.0023
LEU 850.0029
SER 860.0052
LEU 870.0058
GLU 880.0056
PHE 890.0051
TYR 900.0052
MET 910.0055
GLY 920.0051
ARG 930.0039
THR 940.0032
LEU 950.0047
GLN 960.0047
ASN 970.0036
THR 980.0046
MET 990.0054
VAL 1000.0041
ASN 1010.0040
LEU 1020.0064
GLY 1030.0070
LEU 1040.0098
GLN 1050.0100
ASN 1060.0192
ALA 1070.0212
CYS 1080.0196
ASP 1090.0229
GLU 1100.0288
ALA 1110.0289
ILE 1120.0270
TYR 1130.0325
GLN 1140.0367
LEU 1150.0345
GLY 1160.0343
LEU 1170.0283
ASP 1180.0252
LEU 1190.0194
GLU 1200.0190
GLU 1210.0177
LEU 1220.0142
GLU 1230.0110
GLU 1240.0123
ILE 1250.0103
GLU 1260.0045
GLU 1270.0041
ASP 1280.0052
ALA 1290.0052
GLY 1300.0071
LEU 1310.0066
GLY 1320.0063
ASN 1330.0069
GLY 1340.0064
GLY 1350.0056
LEU 1360.0047
GLY 1370.0046
ARG 1380.0044
LEU 1390.0041
ALA 1400.0040
ALA 1410.0039
CYS 1420.0040
PHE 1430.0039
LEU 1440.0040
ASP 1450.0041
SER 1460.0041
MET 1470.0042
ALA 1480.0045
THR 1490.0047
LEU 1500.0047
GLY 1510.0038
LEU 1520.0033
ALA 1530.0030
ALA 1540.0030
TYR 1550.0030
GLY 1560.0036
TYR 1570.0046
GLY 1580.0057
ILE 1590.0069
ARG 1600.0071
TYR 1610.0075
GLU 1620.0078
PHE 1630.0081
GLY 1640.0078
ILE 1650.0083
PHE 1660.0048
ASN 1670.0052
GLN 1680.0051
LYS 1690.0052
ILE 1700.0054
VAL 1710.0054
ASN 1720.0057
GLY 1730.0056
TRP 1740.0051
GLN 1750.0049
VAL 1760.0044
GLU 1770.0042
GLU 1780.0048
ALA 1790.0051
ASP 1800.0063
ASP 1810.0063
TRP 1820.0053
LEU 1830.0048
ARG 1840.0037
TYR 1850.0032
GLY 1860.0055
ASN 1870.0055
PRO 1880.0058
TRP 1890.0059
GLU 1900.0076
LYS 1910.0060
ALA 1920.0062
ARG 1930.0051
PRO 1940.0074
GLU 1950.0074
TYR 1960.0073
MET 1970.0091
LEU 1980.0099
PRO 1990.0120
VAL 2000.0117
HIS 2010.0140
PHE 2020.0134
TYR 2030.0141
GLY 2040.0164
ARG 2050.0162
VAL 2060.0161
GLU 2070.0202
HIS 2080.0222
THR 2090.0276
PRO 2100.0320
ASP 2110.0303
GLY 2120.0254
VAL 2130.0209
LYS 2140.0211
TRP 2150.0181
LEU 2160.0198
ASP 2170.0210
THR 2180.0178
GLN 2190.0184
VAL 2200.0173
VAL 2210.0138
LEU 2220.0121
ALA 2230.0097
MET 2240.0090
PRO 2250.0066
TYR 2260.0058
ASP 2270.0050
THR 2280.0054
PRO 2290.0056
VAL 2300.0058
PRO 2310.0052
GLY 2320.0053
TYR 2330.0047
LYS 2340.0049
ASN 2350.0058
ASN 2360.0067
THR 2370.0060
VAL 2380.0056
ASN 2390.0050
THR 2400.0046
MET 2410.0046
ARG 2420.0050
LEU 2430.0065
TRP 2440.0075
SER 2450.0094
ALA 2460.0132
LYS 2470.0150
ALA 2480.0153
PRO 2490.0172
ASN 2500.0204
ASP 2510.0275
ASP 2560.0516
PHE 2570.0378
ASN 2580.0357
VAL 2590.0334
GLY 2600.0203
ASP 2610.0186
TYR 2620.0208
ILE 2630.0162
GLU 2640.0117
ALA 2650.0144
VAL 2660.0122
LEU 2670.0111
ASP 2680.0133
ARG 2690.0156
ASN 2700.0148
LEU 2710.0133
ALA 2720.0132
GLU 2730.0142
ASN 2740.0132
ILE 2750.0114
SER 2760.0096
ARG 2770.0108
VAL 2780.0104
LEU 2790.0093
TYR 2800.0093
PRO 2810.0121
ASN 2820.0137
ASP 2830.0154
PHE 2860.0172
GLU 2870.0148
GLY 2880.0146
LYS 2890.0117
GLU 2900.0110
LEU 2910.0113
ARG 2920.0093
LEU 2930.0078
LYS 2940.0093
GLN 2950.0086
GLU 2960.0062
TYR 2970.0067
PHE 2980.0085
VAL 2990.0066
VAL 3000.0052
ALA 3010.0070
ALA 3020.0079
THR 3030.0057
LEU 3040.0057
GLN 3050.0082
ASP 3060.0065
ILE 3070.0051
ILE 3080.0067
ARG 3090.0080
ARG 3100.0067
PHE 3110.0071
LYS 3120.0095
SER 3130.0080
SER 3140.0050
LYS 3150.0037
PHE 3160.0070
GLY 3170.0132
THR 3240.0192
CYS 3250.0166
PHE 3260.0135
GLU 3270.0146
THR 3280.0121
PHE 3290.0082
PRO 3300.0075
ASP 3310.0071
LYS 3320.0048
VAL 3330.0034
ALA 3340.0020
ILE 3350.0015
GLN 3360.0003
LEU 3370.0009
ASN 3380.0025
ASP 3390.0037
THR 3400.0028
HIS 3410.0038
PRO 3420.0027
ALA 3430.0010
LEU 3440.0028
SER 3450.0039
ILE 3460.0049
PRO 3470.0060
GLU 3480.0073
LEU 3490.0086
MET 3500.0104
ARG 3510.0115
ILE 3520.0131
LEU 3530.0143
VAL 3540.0171
ASP 3550.0181
VAL 3560.0189
GLU 3570.0191
LYS 3580.0216
VAL 3590.0201
ASP 3600.0207
TRP 3610.0181
ASP 3620.0188
LYS 3630.0189
ALA 3640.0144
TRP 3650.0129
GLU 3660.0140
ILE 3670.0122
THR 3680.0093
LYS 3690.0083
LYS 3700.0082
THR 3710.0062
CYS 3720.0044
ALA 3730.0038
TYR 3740.0019
THR 3750.0026
ASN 3760.0046
HIS 3770.0061
THR 3780.0078
VAL 3790.0090
LEU 3800.0118
PRO 3810.0120
GLU 3820.0136
ALA 3830.0114
LEU 3840.0100
GLU 3850.0078
ARG 3860.0071
TRP 3870.0058
PRO 3880.0057
VAL 3890.0024
SER 3900.0051
MET 3910.0073
PHE 3920.0051
GLU 3930.0063
LYS 3940.0100
LEU 3950.0103
LEU 3960.0086
PRO 3970.0092
ARG 3980.0107
HIS 3990.0072
LEU 4000.0052
GLU 4010.0088
ILE 4020.0094
ILE 4030.0066
TYR 4040.0077
ALA 4050.0119
ILE 4060.0116
ASN 4070.0112
GLN 4080.0144
ARG 4090.0184
HIS 4100.0184
LEU 4110.0195
ASP 4120.0229
HIS 4130.0259
VAL 4140.0270
ALA 4150.0321
ALA 4160.0360
LEU 4170.0355
PHE 4180.0367
PRO 4190.0417
GLY 4200.0429
ASP 4210.0385
VAL 4220.0366
ASP 4230.0342
ARG 4240.0286
LEU 4250.0258
ARG 4260.0244
ARG 4270.0225
MET 4280.0183
SER 4290.0135
VAL 4300.0093
ILE 4310.0087
GLU 4320.0119
GLU 4330.0134
GLY 4340.0153
ASP 4350.0155
CYS 4360.0110
LYS 4370.0082
ARG 4380.0075
ILE 4390.0049
ASN 4400.0068
MET 4410.0040
ALA 4420.0062
HIS 4430.0079
LEU 4440.0048
CYS 4450.0041
VAL 4460.0073
ILE 4470.0087
GLY 4480.0074
SER 4490.0050
HIS 4500.0067
ALA 4510.0054
VAL 4520.0048
ASN 4530.0047
GLY 4540.0040
VAL 4550.0033
ALA 4560.0034
ARG 4570.0031
ILE 4580.0041
HIS 4590.0073
SER 4600.0056
GLU 4610.0080
ILE 4620.0096
VAL 4630.0079
LYS 4640.0108
GLN 4650.0142
SER 4660.0150
VAL 4670.0125
PHE 4680.0120
LYS 4690.0170
ASP 4700.0186
PHE 4710.0148
TYR 4720.0147
GLU 4730.0195
LEU 4740.0200
GLU 4750.0162
PRO 4760.0143
GLU 4770.0122
LYS 4780.0095
PHE 4790.0065
GLN 4800.0045
ASN 4810.0032
LYS 4820.0019
THR 4830.0039
ASN 4840.0038
GLY 4850.0039
ILE 4860.0037
THR 4870.0039
PRO 4880.0042
ARG 4890.0035
ARG 4900.0028
TRP 4910.0030
LEU 4920.0032
LEU 4930.0031
LEU 4940.0023
CYS 4950.0017
ASN 4960.0029
PRO 4970.0036
GLY 4980.0045
LEU 4990.0050
ALA 5000.0050
ASP 5010.0054
THR 5020.0062
ILE 5030.0065
VAL 5040.0063
GLU 5050.0068
LYS 5060.0077
ILE 5070.0078
GLY 5080.0073
GLU 5090.0062
GLU 5100.0070
PHE 5110.0064
LEU 5120.0053
THR 5130.0061
ASP 5140.0069
LEU 5150.0062
SER 5160.0072
GLN 5170.0076
LEU 5180.0070
LYS 5190.0081
LYS 5200.0087
LEU 5210.0081
LEU 5220.0088
PRO 5230.0097
LEU 5240.0090
VAL 5250.0091
SER 5260.0099
ASP 5270.0095
GLU 5280.0094
VAL 5290.0088
PHE 5300.0081
ILE 5310.0081
ARG 5320.0080
ASP 5330.0072
VAL 5340.0066
ALA 5350.0067
LYS 5360.0065
VAL 5370.0057
LYS 5380.0055
GLN 5390.0057
GLU 5400.0054
ASN 5410.0049
LYS 5420.0051
LEU 5430.0051
LYS 5440.0051
PHE 5450.0041
SER 5460.0044
ALA 5470.0052
PHE 5480.0045
LEU 5490.0044
GLU 5500.0049
LYS 5510.0050
GLU 5520.0044
TYR 5530.0043
LYS 5540.0054
VAL 5550.0054
LYS 5560.0059
ILE 5570.0057
ASN 5580.0062
PRO 5590.0061
SER 5600.0065
SER 5610.0061
MET 5620.0058
PHE 5630.0052
ASP 5640.0047
VAL 5650.0044
HIS 5660.0042
VAL 5670.0040
LYS 5680.0039
ARG 5690.0051
ILE 5700.0051
HIS 5710.0053
GLU 5720.0053
TYR 5730.0053
LYS 5740.0052
ARG 5750.0050
GLN 5760.0047
LEU 5770.0047
LEU 5780.0049
ASN 5790.0051
CYS 5800.0049
LEU 5810.0051
HIS 5820.0052
VAL 5830.0050
VAL 5840.0054
THR 5850.0056
LEU 5860.0058
TYR 5870.0057
ASN 5880.0057
ARG 5890.0064
ILE 5900.0067
LYS 5910.0065
ARG 5920.0067
ASP 5930.0073
PRO 5940.0074
ALA 5950.0081
LYS 5960.0080
ALA 5970.0081
PHE 5980.0074
VAL 5990.0069
PRO 6000.0065
ARG 6010.0059
THR 6020.0055
VAL 6030.0050
MET 6040.0047
ILE 6050.0044
GLY 6060.0042
GLY 6070.0040
LYS 6080.0038
ALA 6090.0055
ALA 6100.0052
PRO 6110.0054
GLY 6120.0052
TYR 6130.0051
HIS 6140.0053
MET 6150.0053
ALA 6160.0054
LYS 6170.0054
LEU 6180.0054
ILE 6190.0050
ILE 6200.0049
LYS 6210.0050
LEU 6220.0050
VAL 6230.0050
THR 6240.0051
SER 6250.0051
ILE 6260.0053
GLY 6270.0054
ASP 6280.0055
VAL 6290.0055
VAL 6300.0056
ASN 6310.0059
HIS 6320.0061
ASP 6330.0063
PRO 6340.0068
VAL 6350.0069
VAL 6360.0066
GLY 6370.0068
ASP 6380.0068
ARG 6390.0067
LEU 6400.0060
LYS 6410.0055
VAL 6420.0050
ILE 6430.0047
PHE 6440.0041
LEU 6450.0041
GLU 6460.0040
ASN 6470.0037
TYR 6480.0037
ARG 6490.0026
VAL 6500.0030
SER 6510.0031
LEU 6520.0029
ALA 6530.0032
GLU 6540.0025
LYS 6550.0025
VAL 6560.0028
ILE 6570.0033
PRO 6580.0037
ALA 6590.0046
ALA 6600.0046
ASP 6610.0051
LEU 6620.0048
SER 6630.0043
GLN 6640.0041
GLN 6650.0043
ILE 6660.0044
SER 6670.0046
THR 6680.0050
ALA 6690.0042
GLY 6700.0052
THR 6710.0050
GLU 6720.0048
ALA 6730.0056
SER 6740.0038
GLY 6750.0034
THR 6760.0036
GLY 6770.0034
ASN 6780.0040
MET 6790.0039
LYS 6800.0036
PHE 6810.0038
MET 6820.0045
LEU 6830.0045
ASN 6840.0044
GLY 6850.0051
ALA 6860.0048
LEU 6870.0052
THR 6880.0046
ILE 6890.0044
GLY 6900.0043
THR 6910.0045
MET 6920.0049
ASP 6930.0049
GLY 6940.0041
ALA 6950.0039
ASN 6960.0038
VAL 6970.0040
GLU 6980.0040
MET 6990.0048
ALA 7000.0052
GLU 7010.0056
GLU 7020.0057
ALA 7030.0059
GLY 7040.0064
ALA 7050.0061
GLU 7060.0065
ASN 7070.0060
LEU 7080.0054
PHE 7090.0055
ILE 7100.0055
PHE 7110.0055
GLY 7120.0055
LEU 7130.0058
ARG 7140.0062
VAL 7150.0068
GLU 7160.0078
ASP 7170.0073
VAL 7180.0069
GLU 7190.0090
ALA 7200.0095
LEU 7210.0089
ASP 7220.0098
ARG 7230.0111
LYS 7240.0106
GLY 7250.0099
TYR 7260.0086
ASN 7270.0082
ALA 7280.0071
ARG 7290.0072
GLU 7300.0075
TYR 7310.0071
TYR 7320.0065
ASP 7330.0068
HIS 7340.0071
LEU 7350.0066
PRO 7360.0062
GLU 7370.0058
LEU 7380.0058
LYS 7390.0060
GLN 7400.0056
ALA 7410.0055
VAL 7420.0056
ASP 7430.0055
GLN 7440.0054
ILE 7450.0054
SER 7460.0055
SER 7470.0054
GLY 7480.0055
PHE 7490.0055
PHE 7500.0055
SER 7510.0057
PRO 7520.0060
LYS 7530.0064
GLU 7540.0059
PRO 7550.0056
ASP 7560.0056
CYS 7570.0055
PHE 7580.0054
LYS 7590.0055
ASP 7600.0058
ILE 7610.0057
VAL 7620.0057
ASN 7630.0060
MET 7640.0064
LEU 7650.0062
MET 7660.0064
HIS 7670.0069
HIS 7680.0071
HIS 7680.0071
ASP 7690.0065
ARG 7700.0070
PHE 7710.0065
LYS 7720.0065
VAL 7730.0058
PHE 7740.0062
ALA 7750.0066
ASP 7760.0062
TYR 7770.0058
GLU 7780.0061
ALA 7790.0060
TYR 7800.0055
MET 7810.0054
GLN 7820.0058
CYS 7830.0056
GLN 7840.0055
ALA 7850.0060
GLN 7860.0064
VAL 7870.0061
ASP 7880.0064
GLN 7890.0076
LEU 7900.0074
TYR 7910.0071
ARG 7920.0076
ASN 7930.0079
PRO 7940.0076
LYS 7950.0081
GLU 7960.0082
TRP 7970.0074
THR 7980.0071
LYS 7990.0078
LYS 8000.0073
VAL 8010.0066
ILE 8020.0070
ARG 8030.0073
ASN 8040.0061
ILE 8050.0058
ALA 8060.0065
CYS 8070.0065
SER 8080.0057
GLY 8090.0052
LYS 8100.0049
PHE 8110.0041
SER 8120.0043
SER 8130.0041
ASP 8140.0041
ARG 8150.0039
THR 8160.0035
ILE 8170.0035
THR 8180.0036
GLU 8190.0018
TYR 8200.0014
ALA 8210.0013
ARG 8220.0010
GLU 8230.0010
ILE 8240.0012
TRP 8250.0004
GLY 8260.0011
VAL 8270.0012
GLU 8280.0023
PRO 8290.0034
SER 8300.0041
ASP 8310.0047
LEU 8320.0047
GLN 8330.0052
ILE 8340.0067
PRO 8350.0072
PRO 8360.0071
PRO 8370.0074
ASN 8380.0083
ILE 8390.0111

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: december 26th, 2025.