CNRS Nantes University US2B US2B
home |  start a new run |  job status |  references&downloads |  examples |  help  

Should you encounter any unexpected behaviour,
please let us know.
elNémo has been hacked on november 27th.
It has been moved away and runs again.
**Still some additional cleaning from time to time**
Sorry for the inconvenience.


***  TRANSFERASE 03-MAR-16 5IKO  ***

<R2> analysis for 2604162137592596707

---  normal mode 16  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.0402
LEU 210.0205
GLY 220.0192
ASP 230.0156
VAL 240.0108
ALA 250.0105
GLU 260.0123
VAL 270.0073
ARG 280.0065
LYS 290.0120
SER 300.0130
PHE 310.0112
ASN 320.0160
ARG 330.0201
HIS 340.0197
LEU 350.0221
HIS 360.0294
PHE 370.0315
THR 380.0281
LEU 390.0296
VAL 400.0361
LYS 410.0342
ASP 420.0322
ARG 430.0294
ASN 440.0379
VAL 450.0402
ALA 460.0310
THR 470.0300
PRO 480.0261
ARG 490.0217
ASP 500.0216
TYR 510.0174
PHE 520.0146
PHE 530.0130
ALA 540.0127
LEU 550.0086
ALA 560.0073
HIS 570.0080
THR 580.0065
VAL 590.0043
ARG 600.0051
ASP 610.0085
HIS 620.0064
LEU 630.0058
VAL 640.0079
GLY 650.0073
ARG 660.0077
TRP 670.0082
ILE 680.0098
ARG 690.0097
THR 700.0092
GLN 710.0108
GLN 720.0118
HIS 730.0117
TYR 740.0117
TYR 750.0128
GLU 760.0137
ARG 770.0137
ASP 780.0129
PRO 790.0124
LYS 800.0117
ARG 810.0104
ILE 820.0098
TYR 830.0089
TYR 840.0083
LEU 850.0074
SER 860.0078
LEU 870.0073
GLU 880.0066
PHE 890.0064
TYR 900.0055
MET 910.0055
GLY 920.0058
ARG 930.0060
THR 940.0060
LEU 950.0064
GLN 960.0052
ASN 970.0050
THR 980.0053
MET 990.0061
VAL 1000.0066
ASN 1010.0068
LEU 1020.0081
GLY 1030.0094
LEU 1040.0086
GLN 1050.0084
ASN 1060.0147
ALA 1070.0114
CYS 1080.0080
ASP 1090.0122
GLU 1100.0123
ALA 1110.0076
ILE 1120.0104
TYR 1130.0146
GLN 1140.0110
LEU 1150.0114
GLY 1160.0168
LEU 1170.0164
ASP 1180.0170
LEU 1190.0136
GLU 1200.0165
GLU 1210.0177
LEU 1220.0142
GLU 1230.0131
GLU 1240.0165
ILE 1250.0162
GLU 1260.0086
GLU 1270.0077
ASP 1280.0071
ALA 1290.0057
GLY 1300.0050
LEU 1310.0047
GLY 1320.0046
ASN 1330.0045
GLY 1340.0044
GLY 1350.0048
LEU 1360.0057
GLY 1370.0056
ARG 1380.0051
LEU 1390.0054
ALA 1400.0059
ALA 1410.0055
CYS 1420.0052
PHE 1430.0062
LEU 1440.0065
ASP 1450.0059
SER 1460.0062
MET 1470.0077
ALA 1480.0077
THR 1490.0068
LEU 1500.0078
GLY 1510.0098
LEU 1520.0098
ALA 1530.0099
ALA 1540.0093
TYR 1550.0088
GLY 1560.0080
TYR 1570.0078
GLY 1580.0077
ILE 1590.0076
ARG 1600.0077
TYR 1610.0070
GLU 1620.0063
PHE 1630.0055
GLY 1640.0057
ILE 1650.0059
PHE 1660.0075
ASN 1670.0077
GLN 1680.0093
LYS 1690.0106
ILE 1700.0122
VAL 1710.0136
ASN 1720.0133
GLY 1730.0118
TRP 1740.0125
GLN 1750.0127
VAL 1760.0139
GLU 1770.0106
GLU 1780.0082
ALA 1790.0049
ASP 1800.0027
ASP 1810.0061
TRP 1820.0067
LEU 1830.0061
ARG 1840.0069
TYR 1850.0083
GLY 1860.0083
ASN 1870.0076
PRO 1880.0071
TRP 1890.0065
GLU 1900.0066
LYS 1910.0073
ALA 1920.0069
ARG 1930.0067
PRO 1940.0064
GLU 1950.0064
TYR 1960.0066
MET 1970.0063
LEU 1980.0055
PRO 1990.0052
VAL 2000.0050
HIS 2010.0033
PHE 2020.0011
TYR 2030.0022
GLY 2040.0055
ARG 2050.0085
VAL 2060.0123
GLU 2070.0181
HIS 2080.0224
THR 2090.0262
PRO 2100.0309
ASP 2110.0256
GLY 2120.0209
VAL 2130.0171
LYS 2140.0152
TRP 2150.0105
LEU 2160.0102
ASP 2170.0088
THR 2180.0058
GLN 2190.0056
VAL 2200.0074
VAL 2210.0063
LEU 2220.0063
ALA 2230.0061
MET 2240.0071
PRO 2250.0074
TYR 2260.0070
ASP 2270.0069
THR 2280.0069
PRO 2290.0069
VAL 2300.0070
PRO 2310.0072
GLY 2320.0066
TYR 2330.0048
LYS 2340.0058
ASN 2350.0077
ASN 2360.0074
THR 2370.0075
VAL 2380.0075
ASN 2390.0078
THR 2400.0079
MET 2410.0077
ARG 2420.0075
LEU 2430.0076
TRP 2440.0074
SER 2450.0075
ALA 2460.0097
LYS 2470.0106
ALA 2480.0097
PRO 2490.0112
ASN 2500.0150
ASP 2510.0240
ASP 2560.0217
PHE 2570.0166
ASN 2580.0139
VAL 2590.0098
GLY 2600.0080
ASP 2610.0109
TYR 2620.0099
ILE 2630.0071
GLU 2640.0100
ALA 2650.0125
VAL 2660.0116
LEU 2670.0097
ASP 2680.0092
ARG 2690.0118
ASN 2700.0119
LEU 2710.0086
ALA 2720.0083
GLU 2730.0105
ASN 2740.0106
ILE 2750.0089
SER 2760.0083
ARG 2770.0085
VAL 2780.0085
LEU 2790.0085
TYR 2800.0084
PRO 2810.0107
ASN 2820.0123
ASP 2830.0127
PHE 2860.0108
GLU 2870.0082
GLY 2880.0096
LYS 2890.0093
GLU 2900.0065
LEU 2910.0069
ARG 2920.0077
LEU 2930.0060
LYS 2940.0051
GLN 2950.0066
GLU 2960.0066
TYR 2970.0048
PHE 2980.0053
VAL 2990.0066
VAL 3000.0055
ALA 3010.0045
ALA 3020.0055
THR 3030.0064
LEU 3040.0054
GLN 3050.0049
ASP 3060.0068
ILE 3070.0073
ILE 3080.0068
ARG 3090.0071
ARG 3100.0081
PHE 3110.0093
LYS 3120.0096
SER 3130.0109
SER 3140.0126
LYS 3150.0150
PHE 3160.0224
GLY 3170.0128
THR 3240.0070
CYS 3250.0083
PHE 3260.0074
GLU 3270.0080
THR 3280.0099
PHE 3290.0089
PRO 3300.0096
ASP 3310.0112
LYS 3320.0110
VAL 3330.0098
ALA 3340.0093
ILE 3350.0082
GLN 3360.0084
LEU 3370.0076
ASN 3380.0077
ASP 3390.0085
THR 3400.0077
HIS 3410.0071
PRO 3420.0066
ALA 3430.0066
LEU 3440.0059
SER 3450.0056
ILE 3460.0057
PRO 3470.0045
GLU 3480.0031
LEU 3490.0037
MET 3500.0035
ARG 3510.0024
ILE 3520.0018
LEU 3530.0017
VAL 3540.0037
ASP 3550.0058
VAL 3560.0061
GLU 3570.0049
LYS 3580.0048
VAL 3590.0033
ASP 3600.0041
TRP 3610.0052
ASP 3620.0055
LYS 3630.0033
ALA 3640.0031
TRP 3650.0051
GLU 3660.0065
ILE 3670.0058
THR 3680.0059
LYS 3690.0076
LYS 3700.0087
THR 3710.0081
CYS 3720.0079
ALA 3730.0093
TYR 3740.0084
THR 3750.0084
ASN 3760.0080
HIS 3770.0076
THR 3780.0077
VAL 3790.0085
LEU 3800.0081
PRO 3810.0080
GLU 3820.0093
ALA 3830.0104
LEU 3840.0127
GLU 3850.0115
ARG 3860.0114
TRP 3870.0108
PRO 3880.0117
VAL 3890.0117
SER 3900.0106
MET 3910.0081
PHE 3920.0075
GLU 3930.0084
LYS 3940.0057
LEU 3950.0034
LEU 3960.0043
PRO 3970.0073
ARG 3980.0073
HIS 3990.0062
LEU 4000.0096
GLU 4010.0106
ILE 4020.0085
ILE 4030.0102
TYR 4040.0117
ALA 4050.0104
ILE 4060.0089
ASN 4070.0118
GLN 4080.0131
ARG 4090.0113
HIS 4100.0114
LEU 4110.0136
ASP 4120.0133
HIS 4130.0115
VAL 4140.0131
ALA 4150.0171
ALA 4160.0148
LEU 4170.0123
PHE 4180.0169
PRO 4190.0225
GLY 4200.0278
ASP 4210.0260
VAL 4220.0283
ASP 4230.0284
ARG 4240.0212
LEU 4250.0197
ARG 4260.0228
ARG 4270.0217
MET 4280.0161
SER 4290.0143
VAL 4300.0121
ILE 4310.0143
GLU 4320.0176
GLU 4330.0205
GLY 4340.0242
ASP 4350.0247
CYS 4360.0207
LYS 4370.0179
ARG 4380.0152
ILE 4390.0113
ASN 4400.0117
MET 4410.0098
ALA 4420.0110
HIS 4430.0104
LEU 4440.0082
CYS 4450.0083
VAL 4460.0092
ILE 4470.0079
GLY 4480.0065
SER 4490.0079
HIS 4500.0092
ALA 4510.0092
VAL 4520.0086
ASN 4530.0088
GLY 4540.0057
VAL 4550.0047
ALA 4560.0047
ARG 4570.0060
ILE 4580.0063
HIS 4590.0078
SER 4600.0086
GLU 4610.0099
ILE 4620.0091
VAL 4630.0083
LYS 4640.0112
GLN 4650.0120
SER 4660.0117
VAL 4670.0105
PHE 4680.0101
LYS 4690.0156
ASP 4700.0137
PHE 4710.0113
TYR 4720.0131
GLU 4730.0133
LEU 4740.0110
GLU 4750.0105
PRO 4760.0137
GLU 4770.0132
LYS 4780.0110
PHE 4790.0097
GLN 4800.0094
ASN 4810.0084
LYS 4820.0076
THR 4830.0067
ASN 4840.0038
GLY 4850.0029
ILE 4860.0021
THR 4870.0018
PRO 4880.0010
ARG 4890.0008
ARG 4900.0009
TRP 4910.0020
LEU 4920.0032
LEU 4930.0034
LEU 4940.0029
CYS 4950.0034
ASN 4960.0068
PRO 4970.0084
GLY 4980.0125
LEU 4990.0123
ALA 5000.0108
ASP 5010.0143
THR 5020.0164
ILE 5030.0146
VAL 5040.0144
GLU 5050.0186
LYS 5060.0192
ILE 5070.0159
GLY 5080.0136
GLU 5090.0081
GLU 5100.0057
PHE 5110.0064
LEU 5120.0030
THR 5130.0020
ASP 5140.0042
LEU 5150.0054
SER 5160.0098
GLN 5170.0104
LEU 5180.0115
LYS 5190.0163
LYS 5200.0180
LEU 5210.0186
LEU 5220.0212
PRO 5230.0247
LEU 5240.0242
VAL 5250.0245
SER 5260.0276
ASP 5270.0270
GLU 5280.0278
VAL 5290.0259
PHE 5300.0229
ILE 5310.0228
ARG 5320.0235
ASP 5330.0215
VAL 5340.0172
ALA 5350.0169
LYS 5360.0173
VAL 5370.0151
LYS 5380.0129
GLN 5390.0117
GLU 5400.0125
ASN 5410.0114
LYS 5420.0097
LEU 5430.0103
LYS 5440.0093
PHE 5450.0086
SER 5460.0083
ALA 5470.0086
PHE 5480.0081
LEU 5490.0094
GLU 5500.0093
LYS 5510.0104
GLU 5520.0100
TYR 5530.0087
LYS 5540.0094
VAL 5550.0082
LYS 5560.0086
ILE 5570.0086
ASN 5580.0082
PRO 5590.0088
SER 5600.0082
SER 5610.0075
MET 5620.0079
PHE 5630.0084
ASP 5640.0076
VAL 5650.0087
HIS 5660.0089
VAL 5670.0100
LYS 5680.0107
ARG 5690.0143
ILE 5700.0129
HIS 5710.0133
GLU 5720.0126
TYR 5730.0135
LYS 5740.0127
ARG 5750.0110
GLN 5760.0098
LEU 5770.0088
LEU 5780.0086
ASN 5790.0077
CYS 5800.0061
LEU 5810.0056
HIS 5820.0046
VAL 5830.0031
VAL 5840.0021
THR 5850.0040
LEU 5860.0025
TYR 5870.0035
ASN 5880.0056
ARG 5890.0066
ILE 5900.0070
LYS 5910.0087
ARG 5920.0106
ASP 5930.0113
PRO 5940.0107
ALA 5950.0117
LYS 5960.0084
ALA 5970.0053
PHE 5980.0026
VAL 5990.0044
PRO 6000.0053
ARG 6010.0060
THR 6020.0072
VAL 6030.0070
MET 6040.0086
ILE 6050.0089
GLY 6060.0094
GLY 6070.0097
LYS 6080.0101
ALA 6090.0124
ALA 6100.0130
PRO 6110.0127
GLY 6120.0122
TYR 6130.0118
HIS 6140.0136
MET 6150.0125
ALA 6160.0129
LYS 6170.0126
LEU 6180.0109
ILE 6190.0101
ILE 6200.0109
LYS 6210.0097
LEU 6220.0077
VAL 6230.0080
THR 6240.0093
SER 6250.0067
ILE 6260.0050
GLY 6270.0074
ASP 6280.0082
VAL 6290.0063
VAL 6300.0057
ASN 6310.0087
HIS 6320.0105
ASP 6330.0095
PRO 6340.0124
VAL 6350.0109
VAL 6360.0075
GLY 6370.0090
ASP 6380.0077
ARG 6390.0053
LEU 6400.0046
LYS 6410.0064
VAL 6420.0065
ILE 6430.0089
PHE 6440.0100
LEU 6450.0091
GLU 6460.0092
ASN 6470.0086
TYR 6480.0081
ARG 6490.0044
VAL 6500.0039
SER 6510.0019
LEU 6520.0037
ALA 6530.0047
GLU 6540.0040
LYS 6550.0049
VAL 6560.0063
ILE 6570.0070
PRO 6580.0074
ALA 6590.0094
ALA 6600.0091
ASP 6610.0094
LEU 6620.0089
SER 6630.0089
GLN 6640.0090
GLN 6650.0104
ILE 6660.0101
SER 6670.0121
THR 6680.0127
ALA 6690.0113
GLY 6700.0103
THR 6710.0109
GLU 6720.0103
ALA 6730.0088
SER 6740.0050
GLY 6750.0050
THR 6760.0048
GLY 6770.0051
ASN 6780.0054
MET 6790.0064
LYS 6800.0055
PHE 6810.0072
MET 6820.0082
LEU 6830.0073
ASN 6840.0091
GLY 6850.0101
ALA 6860.0095
LEU 6870.0100
THR 6880.0094
ILE 6890.0091
GLY 6900.0097
THR 6910.0099
MET 6920.0100
ASP 6930.0108
GLY 6940.0066
ALA 6950.0064
ASN 6960.0080
VAL 6970.0070
GLU 6980.0052
MET 6990.0089
ALA 7000.0107
GLU 7010.0110
GLU 7020.0101
ALA 7030.0111
GLY 7040.0154
ALA 7050.0146
GLU 7060.0161
ASN 7070.0145
LEU 7080.0123
PHE 7090.0087
ILE 7100.0099
PHE 7110.0096
GLY 7120.0108
LEU 7130.0127
ARG 7140.0138
VAL 7150.0182
GLU 7160.0197
ASP 7170.0172
VAL 7180.0184
GLU 7190.0289
ALA 7200.0287
LEU 7210.0272
ASP 7220.0335
ARG 7230.0383
LYS 7240.0360
GLY 7250.0333
TYR 7260.0272
ASN 7270.0258
ALA 7280.0197
ARG 7290.0209
GLU 7300.0228
TYR 7310.0192
TYR 7320.0167
ASP 7330.0199
HIS 7340.0205
LEU 7350.0164
PRO 7360.0150
GLU 7370.0107
LEU 7380.0104
LYS 7390.0125
GLN 7400.0100
ALA 7410.0064
VAL 7420.0083
ASP 7430.0083
GLN 7440.0045
ILE 7450.0038
SER 7460.0056
SER 7470.0042
GLY 7480.0022
PHE 7490.0036
PHE 7500.0037
SER 7510.0053
PRO 7520.0061
LYS 7530.0082
GLU 7540.0065
PRO 7550.0032
ASP 7560.0054
CYS 7570.0075
PHE 7580.0075
LYS 7590.0077
ASP 7600.0116
ILE 7610.0105
VAL 7620.0098
ASN 7630.0131
MET 7640.0155
LEU 7650.0141
MET 7660.0161
HIS 7670.0193
HIS 7680.0203
HIS 7680.0204
ASP 7690.0169
ARG 7700.0198
PHE 7710.0177
LYS 7720.0165
VAL 7730.0129
PHE 7740.0137
ALA 7750.0155
ASP 7760.0132
TYR 7770.0106
GLU 7780.0106
ALA 7790.0101
TYR 7800.0086
MET 7810.0059
GLN 7820.0063
CYS 7830.0073
GLN 7840.0067
ALA 7850.0060
GLN 7860.0072
VAL 7870.0074
ASP 7880.0061
GLN 7890.0090
LEU 7900.0110
TYR 7910.0098
ARG 7920.0090
ASN 7930.0117
PRO 7940.0160
LYS 7950.0198
GLU 7960.0192
TRP 7970.0156
THR 7980.0175
LYS 7990.0190
LYS 8000.0170
VAL 8010.0148
ILE 8020.0167
ARG 8030.0172
ASN 8040.0124
ILE 8050.0109
ALA 8060.0123
CYS 8070.0119
SER 8080.0090
GLY 8090.0038
LYS 8100.0044
PHE 8110.0039
SER 8120.0020
SER 8130.0030
ASP 8140.0059
ARG 8150.0063
THR 8160.0067
ILE 8170.0075
THR 8180.0085
GLU 8190.0096
TYR 8200.0092
ALA 8210.0101
ARG 8220.0112
GLU 8230.0110
ILE 8240.0104
TRP 8250.0104
GLY 8260.0113
VAL 8270.0114
GLU 8280.0120
PRO 8290.0111
SER 8300.0113
ASP 8310.0118
LEU 8320.0116
GLN 8330.0115
ILE 8340.0091
PRO 8350.0087
PRO 8360.0084
PRO 8370.0098
ASN 8380.0110
ILE 8390.0151

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: december 26th, 2025.