CNRS Nantes University US2B US2B
home |  start a new run |  job status |  references&downloads |  examples |  help  

Should you encounter any unexpected behaviour,
please let us know.
 elNémo has been hacked on november 27th.
It has been moved away and runs again.
**Still some additional cleaning from time to time**
Sorry for the inconvenience.


***  TRANSFERASE 03-MAR-16 5IKP  ***

<R2> analysis for 2604162227122643408

---  normal mode 20  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.0784
LEU 210.0190
GLY 220.0181
ASP 230.0164
VAL 240.0139
ALA 250.0141
GLU 260.0154
VAL 270.0126
ARG 280.0112
LYS 290.0134
SER 300.0137
PHE 310.0112
ASN 320.0123
ARG 330.0156
HIS 340.0148
LEU 350.0140
HIS 360.0193
PHE 370.0223
THR 380.0203
LEU 390.0183
VAL 400.0221
LYS 410.0212
ASP 420.0197
ARG 430.0162
ASN 440.0201
VAL 450.0211
ALA 460.0154
THR 470.0128
PRO 480.0088
ARG 490.0087
ASP 500.0119
TYR 510.0081
PHE 520.0070
PHE 530.0092
ALA 540.0101
LEU 550.0085
ALA 560.0088
HIS 570.0091
THR 580.0097
VAL 590.0098
ARG 600.0097
ASP 610.0066
HIS 620.0072
LEU 630.0068
VAL 640.0065
GLY 650.0074
ARG 660.0078
TRP 670.0077
ILE 680.0107
ARG 690.0114
THR 700.0096
GLN 710.0111
GLN 720.0164
HIS 730.0168
TYR 740.0157
TYR 750.0194
GLU 760.0226
ARG 770.0221
ASP 780.0194
PRO 790.0172
LYS 800.0142
ARG 810.0098
ILE 820.0083
TYR 830.0064
TYR 840.0053
LEU 850.0039
SER 860.0034
LEU 870.0030
GLU 880.0040
PHE 890.0041
TYR 900.0054
MET 910.0065
GLY 920.0064
ARG 930.0063
THR 940.0062
LEU 950.0061
GLN 960.0063
ASN 970.0065
THR 980.0067
MET 990.0060
VAL 1000.0055
ASN 1010.0056
LEU 1020.0056
GLY 1030.0067
LEU 1040.0069
GLN 1050.0075
ASN 1060.0125
ALA 1070.0119
CYS 1080.0100
ASP 1090.0113
GLU 1100.0123
ALA 1110.0104
ILE 1120.0090
TYR 1130.0102
GLN 1140.0095
LEU 1150.0085
GLY 1160.0090
LEU 1170.0085
ASP 1180.0078
LEU 1190.0077
GLU 1200.0077
GLU 1210.0065
LEU 1220.0066
GLU 1230.0063
GLU 1240.0062
ILE 1250.0071
GLU 1260.0064
GLU 1270.0065
ASP 1280.0065
ALA 1290.0066
GLY 1300.0068
LEU 1310.0059
GLY 1320.0056
ASN 1330.0063
GLY 1340.0058
GLY 1350.0055
LEU 1360.0053
GLY 1370.0047
ARG 1380.0053
LEU 1390.0050
ALA 1400.0042
ALA 1410.0046
CYS 1420.0046
PHE 1430.0040
LEU 1440.0033
ASP 1450.0033
SER 1460.0042
MET 1470.0028
ALA 1480.0018
THR 1490.0035
LEU 1500.0047
GLY 1510.0080
LEU 1520.0073
ALA 1530.0071
ALA 1540.0057
TYR 1550.0050
GLY 1560.0060
TYR 1570.0060
GLY 1580.0063
ILE 1590.0066
ARG 1600.0068
TYR 1610.0072
GLU 1620.0074
PHE 1630.0067
GLY 1640.0063
ILE 1650.0063
PHE 1660.0099
ASN 1670.0101
GLN 1680.0107
LYS 1690.0113
ILE 1700.0124
VAL 1710.0140
ASN 1720.0127
GLY 1730.0111
TRP 1740.0116
GLN 1750.0128
VAL 1760.0114
GLU 1770.0090
GLU 1780.0081
ALA 1790.0066
ASP 1800.0071
ASP 1810.0067
TRP 1820.0066
LEU 1830.0076
ARG 1840.0077
TYR 1850.0080
GLY 1860.0062
ASN 1870.0070
PRO 1880.0074
TRP 1890.0079
GLU 1900.0075
LYS 1910.0073
ALA 1920.0070
ARG 1930.0064
PRO 1940.0067
GLU 1950.0071
TYR 1960.0061
MET 1970.0061
LEU 1980.0063
PRO 1990.0069
VAL 2000.0081
HIS 2010.0097
PHE 2020.0109
TYR 2030.0120
GLY 2040.0119
ARG 2050.0129
VAL 2060.0136
GLU 2070.0141
HIS 2080.0155
THR 2090.0153
PRO 2100.0165
ASP 2110.0141
GLY 2120.0141
VAL 2130.0140
LYS 2140.0129
TRP 2150.0124
LEU 2160.0114
ASP 2170.0115
THR 2180.0108
GLN 2190.0103
VAL 2200.0088
VAL 2210.0073
LEU 2220.0062
ALA 2230.0064
MET 2240.0062
PRO 2250.0063
TYR 2260.0062
ASP 2270.0058
THR 2280.0066
PRO 2290.0061
VAL 2300.0064
PRO 2310.0036
GLY 2320.0032
TYR 2330.0036
LYS 2340.0035
ASN 2350.0038
ASN 2360.0067
THR 2370.0061
VAL 2380.0050
ASN 2390.0048
THR 2400.0054
MET 2410.0064
ARG 2420.0060
LEU 2430.0066
TRP 2440.0063
SER 2450.0065
ALA 2460.0073
LYS 2470.0074
ALA 2480.0074
PRO 2490.0067
ASN 2500.0071
ASP 2510.0121
ASP 2560.0076
PHE 2570.0086
ASN 2580.0126
VAL 2590.0128
GLY 2600.0151
ASP 2610.0103
TYR 2620.0063
ILE 2630.0077
GLU 2640.0114
ALA 2650.0097
VAL 2660.0079
LEU 2670.0097
ASP 2680.0104
ARG 2690.0096
ASN 2700.0107
LEU 2710.0093
ALA 2720.0078
GLU 2730.0084
ASN 2740.0093
ILE 2750.0082
SER 2760.0073
ARG 2770.0082
VAL 2780.0079
LEU 2790.0070
TYR 2800.0075
PRO 2810.0113
ASN 2820.0134
ASP 2830.0158
PHE 2860.0187
GLU 2870.0154
GLY 2880.0129
LYS 2890.0133
GLU 2900.0114
LEU 2910.0095
ARG 2920.0103
LEU 2930.0104
LYS 2940.0088
GLN 2950.0083
GLU 2960.0083
TYR 2970.0081
PHE 2980.0075
VAL 2990.0075
VAL 3000.0078
ALA 3010.0077
ALA 3020.0072
THR 3030.0075
LEU 3040.0079
GLN 3050.0076
ASP 3060.0078
ILE 3070.0087
ILE 3080.0104
ARG 3090.0108
ARG 3100.0110
PHE 3110.0150
LYS 3120.0177
SER 3130.0212
SER 3140.0227
LYS 3150.0292
PHE 3160.0784
THR 3240.0172
CYS 3250.0162
PHE 3260.0148
GLU 3270.0165
THR 3280.0162
PHE 3290.0137
PRO 3300.0137
ASP 3310.0152
LYS 3320.0142
VAL 3330.0121
ALA 3340.0085
ILE 3350.0073
GLN 3360.0071
LEU 3370.0061
ASN 3380.0061
ASP 3390.0074
THR 3400.0073
HIS 3410.0070
PRO 3420.0071
ALA 3430.0073
LEU 3440.0094
SER 3450.0093
ILE 3460.0093
PRO 3470.0094
GLU 3480.0093
LEU 3490.0105
MET 3500.0105
ARG 3510.0104
ILE 3520.0105
LEU 3530.0105
VAL 3540.0111
ASP 3550.0116
VAL 3560.0117
GLU 3570.0112
LYS 3580.0109
VAL 3590.0103
ASP 3600.0099
TRP 3610.0099
ASP 3620.0100
LYS 3630.0102
ALA 3640.0092
TRP 3650.0090
GLU 3660.0098
ILE 3670.0099
THR 3680.0092
LYS 3690.0079
LYS 3700.0091
THR 3710.0087
CYS 3720.0079
ALA 3730.0082
TYR 3740.0058
THR 3750.0062
ASN 3760.0058
HIS 3770.0066
THR 3780.0065
VAL 3790.0074
LEU 3800.0080
PRO 3810.0071
GLU 3820.0095
ALA 3830.0103
LEU 3840.0084
GLU 3850.0094
ARG 3860.0094
TRP 3870.0112
PRO 3880.0119
VAL 3890.0135
SER 3900.0138
MET 3910.0135
PHE 3920.0132
GLU 3930.0135
LYS 3940.0133
LEU 3950.0128
LEU 3960.0128
PRO 3970.0131
ARG 3980.0129
HIS 3990.0121
LEU 4000.0127
GLU 4010.0126
ILE 4020.0115
ILE 4030.0115
TYR 4040.0103
ALA 4050.0097
ILE 4060.0079
ASN 4070.0064
GLN 4080.0049
ARG 4090.0068
HIS 4100.0048
LEU 4110.0049
ASP 4120.0081
HIS 4130.0115
VAL 4140.0137
ALA 4150.0199
ALA 4160.0241
LEU 4170.0234
PHE 4180.0245
PRO 4190.0304
GLY 4200.0329
ASP 4210.0284
VAL 4220.0276
ASP 4230.0264
ARG 4240.0174
LEU 4250.0139
ARG 4260.0157
ARG 4270.0154
MET 4280.0083
SER 4290.0059
VAL 4300.0075
ILE 4310.0090
GLU 4320.0099
GLU 4330.0109
GLY 4340.0138
ASP 4350.0167
CYS 4360.0156
LYS 4370.0129
ARG 4380.0115
ILE 4390.0096
ASN 4400.0087
MET 4410.0094
ALA 4420.0083
HIS 4430.0060
LEU 4440.0075
CYS 4450.0078
VAL 4460.0065
ILE 4470.0059
GLY 4480.0071
SER 4490.0055
HIS 4500.0061
ALA 4510.0063
VAL 4520.0061
ASN 4530.0067
GLY 4540.0053
VAL 4550.0056
ALA 4560.0055
ARG 4570.0053
ILE 4580.0054
HIS 4590.0062
SER 4600.0052
GLU 4610.0046
ILE 4620.0061
VAL 4630.0061
LYS 4640.0053
GLN 4650.0069
SER 4660.0085
VAL 4670.0081
PHE 4680.0058
LYS 4690.0088
ASP 4700.0079
PHE 4710.0043
TYR 4720.0040
GLU 4730.0066
LEU 4740.0063
GLU 4750.0043
PRO 4760.0037
GLU 4770.0044
LYS 4780.0051
PHE 4790.0041
GLN 4800.0043
ASN 4810.0049
LYS 4820.0055
THR 4830.0071
ASN 4840.0065
GLY 4850.0063
ILE 4860.0061
THR 4870.0060
PRO 4880.0059
ARG 4890.0059
ARG 4900.0062
TRP 4910.0069
LEU 4920.0062
LEU 4930.0053
LEU 4940.0075
CYS 4950.0069
ASN 4960.0073
PRO 4970.0077
GLY 4980.0083
LEU 4990.0111
ALA 5000.0117
ASP 5010.0126
THR 5020.0129
ILE 5030.0135
VAL 5040.0142
GLU 5050.0153
LYS 5060.0156
ILE 5070.0157
GLY 5080.0156
GLU 5090.0120
GLU 5100.0129
PHE 5110.0117
LEU 5120.0101
THR 5130.0114
ASP 5140.0130
LEU 5150.0115
SER 5160.0139
GLN 5170.0144
LEU 5180.0125
LYS 5190.0164
LYS 5200.0175
LEU 5210.0164
LEU 5220.0162
PRO 5230.0174
LEU 5240.0180
VAL 5250.0165
SER 5260.0171
ASP 5270.0183
GLU 5280.0182
VAL 5290.0185
PHE 5300.0176
ILE 5310.0159
ARG 5320.0159
ASP 5330.0164
VAL 5340.0136
ALA 5350.0128
LYS 5360.0130
VAL 5370.0128
LYS 5380.0120
GLN 5390.0139
GLU 5400.0144
ASN 5410.0141
LYS 5420.0139
LEU 5430.0145
LYS 5440.0142
PHE 5450.0131
SER 5460.0130
ALA 5470.0141
PHE 5480.0136
LEU 5490.0143
GLU 5500.0151
LYS 5510.0164
GLU 5520.0152
TYR 5530.0134
LYS 5540.0146
VAL 5550.0136
LYS 5560.0146
ILE 5570.0153
ASN 5580.0158
PRO 5590.0157
SER 5600.0157
SER 5610.0140
MET 5620.0133
PHE 5630.0133
ASP 5640.0117
VAL 5650.0120
HIS 5660.0113
VAL 5670.0124
LYS 5680.0127
ARG 5690.0136
ILE 5700.0120
HIS 5710.0117
GLU 5720.0102
TYR 5730.0108
LYS 5740.0111
ARG 5750.0088
GLN 5760.0088
LEU 5770.0067
LEU 5780.0067
ASN 5790.0079
CYS 5800.0059
LEU 5810.0042
HIS 5820.0068
VAL 5830.0070
VAL 5840.0053
THR 5850.0080
LEU 5860.0102
TYR 5870.0088
ASN 5880.0098
ARG 5890.0129
ILE 5900.0135
LYS 5910.0122
ARG 5920.0153
ASP 5930.0180
PRO 5940.0161
ALA 5950.0201
LYS 5960.0198
ALA 5970.0208
PHE 5980.0175
VAL 5990.0148
PRO 6000.0142
ARG 6010.0130
THR 6020.0127
VAL 6030.0109
MET 6040.0102
ILE 6050.0101
GLY 6060.0112
GLY 6070.0119
LYS 6080.0120
ALA 6090.0118
ALA 6100.0136
PRO 6110.0135
GLY 6120.0140
TYR 6130.0126
HIS 6140.0133
MET 6150.0115
ALA 6160.0120
LYS 6170.0121
LEU 6180.0103
ILE 6190.0092
ILE 6200.0106
LYS 6210.0096
LEU 6220.0073
VAL 6230.0080
THR 6240.0092
SER 6250.0068
ILE 6260.0054
GLY 6270.0076
ASP 6280.0067
VAL 6290.0050
VAL 6300.0072
ASN 6310.0095
HIS 6320.0079
ASP 6330.0080
PRO 6340.0107
VAL 6350.0112
VAL 6360.0111
GLY 6370.0129
ASP 6380.0144
ARG 6390.0141
LEU 6400.0115
LYS 6410.0111
VAL 6420.0097
ILE 6430.0117
PHE 6440.0110
LEU 6450.0110
GLU 6460.0111
ASN 6470.0112
TYR 6480.0111
ARG 6490.0091
VAL 6500.0089
SER 6510.0078
LEU 6520.0081
ALA 6530.0088
GLU 6540.0094
LYS 6550.0087
VAL 6560.0098
ILE 6570.0108
PRO 6580.0099
ALA 6590.0123
ALA 6600.0119
ASP 6610.0120
LEU 6620.0114
SER 6630.0115
GLN 6640.0111
GLN 6650.0114
ILE 6660.0100
SER 6670.0102
THR 6680.0096
ALA 6690.0107
GLY 6700.0097
THR 6710.0096
GLU 6720.0090
ALA 6730.0077
SER 6740.0087
GLY 6750.0085
THR 6760.0089
GLY 6770.0084
ASN 6780.0082
MET 6790.0098
LYS 6800.0093
PHE 6810.0091
MET 6820.0096
LEU 6830.0096
ASN 6840.0104
GLY 6850.0108
ALA 6860.0104
LEU 6870.0111
THR 6880.0112
ILE 6890.0111
GLY 6900.0108
THR 6910.0104
MET 6920.0113
ASP 6930.0117
GLY 6940.0091
ALA 6950.0090
ASN 6960.0095
VAL 6970.0088
GLU 6980.0081
MET 6990.0101
ALA 7000.0094
GLU 7010.0101
GLU 7020.0109
ALA 7030.0105
GLY 7040.0115
ALA 7050.0109
GLU 7060.0109
ASN 7070.0110
LEU 7080.0105
PHE 7090.0120
ILE 7100.0115
PHE 7110.0104
GLY 7120.0095
LEU 7130.0093
ARG 7140.0141
VAL 7150.0151
GLU 7160.0166
ASP 7170.0142
VAL 7180.0122
GLU 7190.0154
ALA 7200.0139
LEU 7210.0095
ASP 7220.0110
ARG 7230.0123
LYS 7240.0065
GLY 7250.0070
TYR 7260.0053
ASN 7270.0072
ALA 7280.0083
ARG 7290.0127
GLU 7300.0118
TYR 7310.0100
TYR 7320.0120
ASP 7330.0169
HIS 7340.0171
LEU 7350.0150
PRO 7360.0160
GLU 7370.0120
LEU 7380.0090
LYS 7390.0122
GLN 7400.0116
ALA 7410.0073
VAL 7420.0082
ASP 7430.0119
GLN 7440.0088
ILE 7450.0076
SER 7460.0112
SER 7470.0125
GLY 7480.0104
PHE 7490.0080
PHE 7500.0057
SER 7510.0089
PRO 7520.0106
LYS 7530.0135
GLU 7540.0136
PRO 7550.0129
ASP 7560.0143
CYS 7570.0125
PHE 7580.0099
LYS 7590.0116
ASP 7600.0127
ILE 7610.0090
VAL 7620.0082
ASN 7630.0117
MET 7640.0111
LEU 7650.0069
MET 7660.0093
HIS 7670.0118
HIS 7680.0122
ASP 7690.0078
ARG 7700.0093
PHE 7710.0085
LYS 7720.0055
VAL 7730.0046
PHE 7740.0032
ALA 7750.0041
ASP 7760.0068
TYR 7770.0062
GLU 7780.0090
ALA 7790.0084
TYR 7800.0086
MET 7810.0088
GLN 7820.0106
CYS 7830.0115
GLN 7840.0101
ALA 7850.0106
GLN 7860.0114
VAL 7870.0121
ASP 7880.0125
GLN 7890.0126
LEU 7900.0136
TYR 7910.0139
ARG 7920.0144
ASN 7930.0158
PRO 7940.0152
LYS 7950.0157
GLU 7960.0145
TRP 7970.0140
THR 7980.0153
LYS 7990.0136
LYS 8000.0127
VAL 8010.0128
ILE 8020.0141
ARG 8030.0140
ASN 8040.0109
ILE 8050.0113
ALA 8060.0123
CYS 8070.0122
SER 8080.0117
GLY 8090.0076
LYS 8100.0084
PHE 8110.0076
SER 8120.0071
SER 8130.0072
ASP 8140.0057
ARG 8150.0067
THR 8160.0057
ILE 8170.0041
THR 8180.0048
GLU 8190.0078
TYR 8200.0059
ALA 8210.0071
ARG 8220.0090
GLU 8230.0084
ILE 8240.0076
TRP 8250.0078
GLY 8260.0103
VAL 8270.0109
GLU 8280.0126
PRO 8290.0132
SER 8300.0144
ASP 8310.0164
LEU 8320.0157
GLN 8330.0156
ILE 8340.0124
PRO 8350.0165
PRO 8360.0172
PRO 8370.0197
ASN 8380.0231
ILE 8390.0465

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: december 26th, 2025.