CNRS Nantes University US2B US2B
home |  start a new run |  job status |  references&downloads |  examples |  help  

Should you encounter any unexpected behaviour,
please let us know.
 elNémo has been hacked on november 27th.
It has been moved away and runs again.
**Still some additional cleaning from time to time**
Sorry for the inconvenience.


***  TRANSFERASE 03-MAR-16 5IKP  ***

<R2> analysis for 2604162227122643408

---  normal mode 25  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.0862
LEU 210.0157
GLY 220.0144
ASP 230.0121
VAL 240.0140
ALA 250.0143
GLU 260.0120
VAL 270.0122
ARG 280.0139
LYS 290.0125
SER 300.0116
PHE 310.0127
ASN 320.0140
ARG 330.0137
HIS 340.0154
LEU 350.0176
HIS 360.0204
PHE 370.0212
THR 380.0219
LEU 390.0230
VAL 400.0246
LYS 410.0258
ASP 420.0244
ARG 430.0223
ASN 440.0262
VAL 450.0276
ALA 460.0200
THR 470.0186
PRO 480.0155
ARG 490.0179
ASP 500.0190
TYR 510.0146
PHE 520.0144
PHE 530.0150
ALA 540.0139
LEU 550.0126
ALA 560.0135
HIS 570.0118
THR 580.0106
VAL 590.0111
ARG 600.0110
ASP 610.0089
HIS 620.0090
LEU 630.0102
VAL 640.0092
GLY 650.0081
ARG 660.0106
TRP 670.0095
ILE 680.0096
ARG 690.0103
THR 700.0097
GLN 710.0091
GLN 720.0098
HIS 730.0102
TYR 740.0091
TYR 750.0090
GLU 760.0103
ARG 770.0100
ASP 780.0076
PRO 790.0062
LYS 800.0040
ARG 810.0039
ILE 820.0036
TYR 830.0036
TYR 840.0040
LEU 850.0046
SER 860.0043
LEU 870.0037
GLU 880.0028
PHE 890.0022
TYR 900.0022
MET 910.0072
GLY 920.0072
ARG 930.0073
THR 940.0071
LEU 950.0078
GLN 960.0090
ASN 970.0091
THR 980.0085
MET 990.0088
VAL 1000.0095
ASN 1010.0094
LEU 1020.0083
GLY 1030.0094
LEU 1040.0091
GLN 1050.0102
ASN 1060.0132
ALA 1070.0121
CYS 1080.0127
ASP 1090.0159
GLU 1100.0166
ALA 1110.0149
ILE 1120.0159
TYR 1130.0182
GLN 1140.0177
LEU 1150.0172
GLY 1160.0160
LEU 1170.0158
ASP 1180.0150
LEU 1190.0140
GLU 1200.0146
GLU 1210.0127
LEU 1220.0126
GLU 1230.0125
GLU 1240.0129
ILE 1250.0131
GLU 1260.0080
GLU 1270.0069
ASP 1280.0072
ALA 1290.0068
GLY 1300.0059
LEU 1310.0032
GLY 1320.0027
ASN 1330.0027
GLY 1340.0023
GLY 1350.0020
LEU 1360.0029
GLY 1370.0023
ARG 1380.0017
LEU 1390.0025
ALA 1400.0026
ALA 1410.0035
CYS 1420.0036
PHE 1430.0037
LEU 1440.0044
ASP 1450.0053
SER 1460.0060
MET 1470.0064
ALA 1480.0074
THR 1490.0081
LEU 1500.0082
GLY 1510.0083
LEU 1520.0071
ALA 1530.0065
ALA 1540.0051
TYR 1550.0044
GLY 1560.0033
TYR 1570.0032
GLY 1580.0025
ILE 1590.0020
ARG 1600.0015
TYR 1610.0015
GLU 1620.0016
PHE 1630.0016
GLY 1640.0017
ILE 1650.0020
PHE 1660.0021
ASN 1670.0022
GLN 1680.0024
LYS 1690.0022
ILE 1700.0024
VAL 1710.0024
ASN 1720.0028
GLY 1730.0033
TRP 1740.0029
GLN 1750.0025
VAL 1760.0019
GLU 1770.0020
GLU 1780.0015
ALA 1790.0016
ASP 1800.0021
ASP 1810.0027
TRP 1820.0028
LEU 1830.0038
ARG 1840.0037
TYR 1850.0041
GLY 1860.0074
ASN 1870.0082
PRO 1880.0085
TRP 1890.0085
GLU 1900.0071
LYS 1910.0043
ALA 1920.0034
ARG 1930.0034
PRO 1940.0052
GLU 1950.0059
TYR 1960.0053
MET 1970.0062
LEU 1980.0074
PRO 1990.0092
VAL 2000.0092
HIS 2010.0103
PHE 2020.0081
TYR 2030.0077
GLY 2040.0099
ARG 2050.0118
VAL 2060.0149
GLU 2070.0229
HIS 2080.0295
THR 2090.0352
PRO 2100.0422
ASP 2110.0345
GLY 2120.0283
VAL 2130.0233
LYS 2140.0219
TRP 2150.0164
LEU 2160.0167
ASP 2170.0142
THR 2180.0136
GLN 2190.0124
VAL 2200.0146
VAL 2210.0126
LEU 2220.0106
ALA 2230.0076
MET 2240.0057
PRO 2250.0034
TYR 2260.0029
ASP 2270.0043
THR 2280.0058
PRO 2290.0076
VAL 2300.0091
PRO 2310.0089
GLY 2320.0096
TYR 2330.0102
LYS 2340.0108
ASN 2350.0106
ASN 2360.0120
THR 2370.0104
VAL 2380.0093
ASN 2390.0078
THR 2400.0067
MET 2410.0037
ARG 2420.0030
LEU 2430.0022
TRP 2440.0031
SER 2450.0037
ALA 2460.0049
LYS 2470.0120
ALA 2480.0183
PRO 2490.0247
ASN 2500.0304
ASP 2510.0862
ASP 2560.0374
PHE 2570.0247
ASN 2580.0197
VAL 2590.0057
GLY 2600.0140
ASP 2610.0145
TYR 2620.0051
ILE 2630.0129
GLU 2640.0203
ALA 2650.0157
VAL 2660.0181
LEU 2670.0162
ASP 2680.0172
ARG 2690.0188
ASN 2700.0174
LEU 2710.0114
ALA 2720.0108
GLU 2730.0094
ASN 2740.0070
ILE 2750.0055
SER 2760.0037
ARG 2770.0039
VAL 2780.0027
LEU 2790.0025
TYR 2800.0040
PRO 2810.0079
ASN 2820.0176
ASP 2830.0224
PHE 2860.0379
GLU 2870.0282
GLY 2880.0195
LYS 2890.0165
GLU 2900.0085
LEU 2910.0073
ARG 2920.0068
LEU 2930.0066
LYS 2940.0054
GLN 2950.0040
GLU 2960.0053
TYR 2970.0055
PHE 2980.0052
VAL 2990.0047
VAL 3000.0050
ALA 3010.0057
ALA 3020.0053
THR 3030.0051
LEU 3040.0055
GLN 3050.0056
ASP 3060.0044
ILE 3070.0041
ILE 3080.0037
ARG 3090.0037
ARG 3100.0036
PHE 3110.0024
LYS 3120.0027
SER 3130.0044
SER 3140.0054
LYS 3150.0082
PHE 3160.0102
THR 3240.0007
CYS 3250.0006
PHE 3260.0009
GLU 3270.0009
THR 3280.0006
PHE 3290.0021
PRO 3300.0027
ASP 3310.0024
LYS 3320.0017
VAL 3330.0020
ALA 3340.0035
ILE 3350.0038
GLN 3360.0046
LEU 3370.0049
ASN 3380.0057
ASP 3390.0068
THR 3400.0058
HIS 3410.0057
PRO 3420.0050
ALA 3430.0043
LEU 3440.0044
SER 3450.0048
ILE 3460.0046
PRO 3470.0036
GLU 3480.0036
LEU 3490.0039
MET 3500.0039
ARG 3510.0039
ILE 3520.0038
LEU 3530.0037
VAL 3540.0049
ASP 3550.0070
VAL 3560.0071
GLU 3570.0060
LYS 3580.0061
VAL 3590.0035
ASP 3600.0041
TRP 3610.0041
ASP 3620.0054
LYS 3630.0056
ALA 3640.0043
TRP 3650.0052
GLU 3660.0056
ILE 3670.0050
THR 3680.0051
LYS 3690.0052
LYS 3700.0056
THR 3710.0046
CYS 3720.0052
ALA 3730.0068
TYR 3740.0071
THR 3750.0083
ASN 3760.0093
HIS 3770.0103
THR 3780.0107
VAL 3790.0137
LEU 3800.0140
PRO 3810.0121
GLU 3820.0118
ALA 3830.0116
LEU 3840.0096
GLU 3850.0077
ARG 3860.0050
TRP 3870.0034
PRO 3880.0029
VAL 3890.0040
SER 3900.0051
MET 3910.0045
PHE 3920.0035
GLU 3930.0046
LYS 3940.0051
LEU 3950.0043
LEU 3960.0050
PRO 3970.0061
ARG 3980.0067
HIS 3990.0027
LEU 4000.0035
GLU 4010.0048
ILE 4020.0042
ILE 4030.0030
TYR 4040.0086
ALA 4050.0113
ILE 4060.0104
ASN 4070.0118
GLN 4080.0162
ARG 4090.0195
HIS 4100.0194
LEU 4110.0235
ASP 4120.0288
HIS 4130.0296
VAL 4140.0343
ALA 4150.0415
ALA 4160.0454
LEU 4170.0471
PHE 4180.0482
PRO 4190.0623
GLY 4200.0644
ASP 4210.0533
VAL 4220.0478
ASP 4230.0377
ARG 4240.0299
LEU 4250.0278
ARG 4260.0223
ARG 4270.0182
MET 4280.0171
SER 4290.0118
VAL 4300.0085
ILE 4310.0077
GLU 4320.0059
GLU 4330.0062
GLY 4340.0038
ASP 4350.0067
CYS 4360.0073
LYS 4370.0064
ARG 4380.0032
ILE 4390.0020
ASN 4400.0039
MET 4410.0044
ALA 4420.0077
HIS 4430.0083
LEU 4440.0056
CYS 4450.0071
VAL 4460.0098
ILE 4470.0091
GLY 4480.0072
SER 4490.0073
HIS 4500.0082
ALA 4510.0091
VAL 4520.0096
ASN 4530.0106
GLY 4540.0107
VAL 4550.0105
ALA 4560.0108
ARG 4570.0108
ILE 4580.0116
HIS 4590.0163
SER 4600.0150
GLU 4610.0168
ILE 4620.0166
VAL 4630.0142
LYS 4640.0186
GLN 4650.0209
SER 4660.0185
VAL 4670.0149
PHE 4680.0146
LYS 4690.0224
ASP 4700.0229
PHE 4710.0202
TYR 4720.0238
GLU 4730.0280
LEU 4740.0253
GLU 4750.0231
PRO 4760.0254
GLU 4770.0241
LYS 4780.0196
PHE 4790.0116
GLN 4800.0118
ASN 4810.0121
LYS 4820.0118
THR 4830.0124
ASN 4840.0057
GLY 4850.0038
ILE 4860.0031
THR 4870.0037
PRO 4880.0052
ARG 4890.0064
ARG 4900.0046
TRP 4910.0040
LEU 4920.0059
LEU 4930.0072
LEU 4940.0069
CYS 4950.0046
ASN 4960.0062
PRO 4970.0091
GLY 4980.0103
LEU 4990.0136
ALA 5000.0142
ASP 5010.0185
THR 5020.0186
ILE 5030.0174
VAL 5040.0214
GLU 5050.0240
LYS 5060.0223
ILE 5070.0212
GLY 5080.0228
GLU 5090.0202
GLU 5100.0194
PHE 5110.0160
LEU 5120.0152
THR 5130.0162
ASP 5140.0140
LEU 5150.0107
SER 5160.0116
GLN 5170.0145
LEU 5180.0118
LYS 5190.0130
LYS 5200.0165
LEU 5210.0160
LEU 5220.0132
PRO 5230.0154
LEU 5240.0180
VAL 5250.0152
SER 5260.0181
ASP 5270.0215
GLU 5280.0240
VAL 5290.0253
PHE 5300.0217
ILE 5310.0191
ARG 5320.0215
ASP 5330.0213
VAL 5340.0143
ALA 5350.0136
LYS 5360.0146
VAL 5370.0110
LYS 5380.0079
GLN 5390.0054
GLU 5400.0047
ASN 5410.0030
LYS 5420.0031
LEU 5430.0031
LYS 5440.0019
PHE 5450.0023
SER 5460.0031
ALA 5470.0033
PHE 5480.0037
LEU 5490.0041
GLU 5500.0049
LYS 5510.0051
GLU 5520.0047
TYR 5530.0048
LYS 5540.0057
VAL 5550.0054
LYS 5560.0055
ILE 5570.0045
ASN 5580.0042
PRO 5590.0017
SER 5600.0017
SER 5610.0013
MET 5620.0010
PHE 5630.0010
ASP 5640.0023
VAL 5650.0025
HIS 5660.0031
VAL 5670.0031
LYS 5680.0037
ARG 5690.0037
ILE 5700.0035
HIS 5710.0030
GLU 5720.0029
TYR 5730.0029
LYS 5740.0036
ARG 5750.0036
GLN 5760.0042
LEU 5770.0041
LEU 5780.0042
ASN 5790.0040
CYS 5800.0041
LEU 5810.0042
HIS 5820.0047
VAL 5830.0052
VAL 5840.0064
THR 5850.0075
LEU 5860.0078
TYR 5870.0077
ASN 5880.0084
ARG 5890.0086
ILE 5900.0086
LYS 5910.0081
ARG 5920.0091
ASP 5930.0101
PRO 5940.0100
ALA 5950.0114
LYS 5960.0101
ALA 5970.0093
PHE 5980.0072
VAL 5990.0025
PRO 6000.0027
ARG 6010.0027
THR 6020.0030
VAL 6030.0032
MET 6040.0028
ILE 6050.0032
GLY 6060.0030
GLY 6070.0033
LYS 6080.0032
ALA 6090.0026
ALA 6100.0015
PRO 6110.0015
GLY 6120.0016
TYR 6130.0019
HIS 6140.0025
MET 6150.0030
ALA 6160.0027
LYS 6170.0029
LEU 6180.0038
ILE 6190.0037
ILE 6200.0035
LYS 6210.0037
LEU 6220.0044
VAL 6230.0046
THR 6240.0044
SER 6250.0047
ILE 6260.0055
GLY 6270.0055
ASP 6280.0051
VAL 6290.0056
VAL 6300.0063
ASN 6310.0063
HIS 6320.0063
ASP 6330.0070
PRO 6340.0081
VAL 6350.0080
VAL 6360.0072
GLY 6370.0074
ASP 6380.0068
ARG 6390.0067
LEU 6400.0058
LYS 6410.0053
VAL 6420.0046
ILE 6430.0044
PHE 6440.0031
LEU 6450.0031
GLU 6460.0028
ASN 6470.0029
TYR 6480.0032
ARG 6490.0047
VAL 6500.0045
SER 6510.0041
LEU 6520.0032
ALA 6530.0029
GLU 6540.0021
LYS 6550.0017
VAL 6560.0018
ILE 6570.0018
PRO 6580.0020
ALA 6590.0021
ALA 6600.0016
ASP 6610.0019
LEU 6620.0018
SER 6630.0017
GLN 6640.0043
GLN 6650.0043
ILE 6660.0043
SER 6670.0044
THR 6680.0044
ALA 6690.0047
GLY 6700.0047
THR 6710.0057
GLU 6720.0072
ALA 6730.0078
SER 6740.0073
GLY 6750.0064
THR 6760.0048
GLY 6770.0049
ASN 6780.0047
MET 6790.0017
LYS 6800.0015
PHE 6810.0019
MET 6820.0022
LEU 6830.0028
ASN 6840.0033
GLY 6850.0036
ALA 6860.0032
LEU 6870.0032
THR 6880.0033
ILE 6890.0052
GLY 6900.0053
THR 6910.0055
MET 6920.0054
ASP 6930.0055
GLY 6940.0075
ALA 6950.0076
ASN 6960.0069
VAL 6970.0066
GLU 6980.0070
MET 6990.0038
ALA 7000.0045
GLU 7010.0041
GLU 7020.0029
ALA 7030.0030
GLY 7040.0033
ALA 7050.0043
GLU 7060.0052
ASN 7070.0046
LEU 7080.0047
PHE 7090.0040
ILE 7100.0043
PHE 7110.0052
GLY 7120.0060
LEU 7130.0064
ARG 7140.0087
VAL 7150.0081
GLU 7160.0101
ASP 7170.0090
VAL 7180.0066
GLU 7190.0084
ALA 7200.0083
LEU 7210.0048
ASP 7220.0049
ARG 7230.0070
LYS 7240.0019
GLY 7250.0016
TYR 7260.0019
ASN 7270.0055
ALA 7280.0072
ARG 7290.0098
GLU 7300.0097
TYR 7310.0094
TYR 7320.0105
ASP 7330.0130
HIS 7340.0133
LEU 7350.0122
PRO 7360.0125
GLU 7370.0106
LEU 7380.0091
LYS 7390.0104
GLN 7400.0102
ALA 7410.0084
VAL 7420.0079
ASP 7430.0090
GLN 7440.0084
ILE 7450.0072
SER 7460.0077
SER 7470.0085
GLY 7480.0076
PHE 7490.0077
PHE 7500.0067
SER 7510.0063
PRO 7520.0075
LYS 7530.0071
GLU 7540.0069
PRO 7550.0080
ASP 7560.0074
CYS 7570.0059
PHE 7580.0058
LYS 7590.0071
ASP 7600.0057
ILE 7610.0053
VAL 7620.0069
ASN 7630.0069
MET 7640.0050
LEU 7650.0053
MET 7660.0069
HIS 7670.0064
HIS 7680.0047
ASP 7690.0024
ARG 7700.0007
PHE 7710.0016
LYS 7720.0025
VAL 7730.0040
PHE 7740.0040
ALA 7750.0032
ASP 7760.0044
TYR 7770.0056
GLU 7780.0066
ALA 7790.0040
TYR 7800.0043
MET 7810.0046
GLN 7820.0049
CYS 7830.0051
GLN 7840.0033
ALA 7850.0038
GLN 7860.0027
VAL 7870.0017
ASP 7880.0026
GLN 7890.0069
LEU 7900.0065
TYR 7910.0052
ARG 7920.0065
ASN 7930.0079
PRO 7940.0122
LYS 7950.0134
GLU 7960.0117
TRP 7970.0085
THR 7980.0093
LYS 7990.0109
LYS 8000.0082
VAL 8010.0079
ILE 8020.0090
ARG 8030.0065
ASN 8040.0053
ILE 8050.0065
ALA 8060.0072
CYS 8070.0055
SER 8080.0049
GLY 8090.0041
LYS 8100.0038
PHE 8110.0036
SER 8120.0040
SER 8130.0041
ASP 8140.0042
ARG 8150.0034
THR 8160.0030
ILE 8170.0032
THR 8180.0031
GLU 8190.0028
TYR 8200.0025
ALA 8210.0024
ARG 8220.0032
GLU 8230.0044
ILE 8240.0051
TRP 8250.0034
GLY 8260.0054
VAL 8270.0052
GLU 8280.0063
PRO 8290.0073
SER 8300.0088
ASP 8310.0099
LEU 8320.0106
GLN 8330.0114
ILE 8340.0124
PRO 8350.0151
PRO 8360.0163
PRO 8370.0168
ASN 8380.0189
ILE 8390.0180

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: december 26th, 2025.