CNRS Nantes University US2B US2B
home |  start a new run |  job status |  references&downloads |  examples |  help  

Should you encounter any unexpected behaviour,
please let us know.
 elNémo has been hacked on november 27th.
It has been moved away and runs again.
**Still some additional cleaning from time to time**
Sorry for the inconvenience.


***  TRANSFERASE 03-MAR-16 5IKP  ***

<R2> analysis for 2604162227122643408

---  normal mode 29  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.0770
LEU 210.0315
GLY 220.0264
ASP 230.0242
VAL 240.0245
ALA 250.0222
GLU 260.0190
VAL 270.0173
ARG 280.0162
LYS 290.0141
SER 300.0101
PHE 310.0104
ASN 320.0090
ARG 330.0068
HIS 340.0045
LEU 350.0032
HIS 360.0060
PHE 370.0052
THR 380.0045
LEU 390.0056
VAL 400.0072
LYS 410.0061
ASP 420.0075
ARG 430.0071
ASN 440.0076
VAL 450.0056
ALA 460.0046
THR 470.0069
PRO 480.0095
ARG 490.0103
ASP 500.0074
TYR 510.0086
PHE 520.0110
PHE 530.0101
ALA 540.0089
LEU 550.0116
ALA 560.0123
HIS 570.0115
THR 580.0121
VAL 590.0147
ARG 600.0150
ASP 610.0162
HIS 620.0180
LEU 630.0184
VAL 640.0211
GLY 650.0247
ARG 660.0220
TRP 670.0192
ILE 680.0236
ARG 690.0248
THR 700.0202
GLN 710.0179
GLN 720.0199
HIS 730.0158
TYR 740.0106
TYR 750.0140
GLU 760.0142
ARG 770.0081
ASP 780.0069
PRO 790.0026
LYS 800.0054
ARG 810.0044
ILE 820.0033
TYR 830.0033
TYR 840.0032
LEU 850.0034
SER 860.0017
LEU 870.0015
GLU 880.0013
PHE 890.0012
TYR 900.0011
MET 910.0066
GLY 920.0070
ARG 930.0078
THR 940.0081
LEU 950.0091
GLN 960.0114
ASN 970.0118
THR 980.0135
MET 990.0137
VAL 1000.0130
ASN 1010.0161
LEU 1020.0159
GLY 1030.0159
LEU 1040.0155
GLN 1050.0155
ASN 1060.0238
ALA 1070.0204
CYS 1080.0177
ASP 1090.0209
GLU 1100.0215
ALA 1110.0201
ILE 1120.0174
TYR 1130.0203
GLN 1140.0202
LEU 1150.0153
GLY 1160.0131
LEU 1170.0127
ASP 1180.0147
LEU 1190.0160
GLU 1200.0172
GLU 1210.0128
LEU 1220.0123
GLU 1230.0139
GLU 1240.0140
ILE 1250.0125
GLU 1260.0085
GLU 1270.0079
ASP 1280.0069
ALA 1290.0069
GLY 1300.0069
LEU 1310.0022
GLY 1320.0007
ASN 1330.0009
GLY 1340.0021
GLY 1350.0030
LEU 1360.0031
GLY 1370.0025
ARG 1380.0024
LEU 1390.0027
ALA 1400.0024
ALA 1410.0020
CYS 1420.0024
PHE 1430.0022
LEU 1440.0020
ASP 1450.0027
SER 1460.0045
MET 1470.0036
ALA 1480.0050
THR 1490.0068
LEU 1500.0067
GLY 1510.0090
LEU 1520.0056
ALA 1530.0040
ALA 1540.0029
TYR 1550.0041
GLY 1560.0013
TYR 1570.0010
GLY 1580.0010
ILE 1590.0018
ARG 1600.0031
TYR 1610.0022
GLU 1620.0037
PHE 1630.0034
GLY 1640.0020
ILE 1650.0010
PHE 1660.0024
ASN 1670.0023
GLN 1680.0018
LYS 1690.0022
ILE 1700.0019
VAL 1710.0031
ASN 1720.0031
GLY 1730.0027
TRP 1740.0024
GLN 1750.0023
VAL 1760.0021
GLU 1770.0029
GLU 1780.0035
ALA 1790.0046
ASP 1800.0046
ASP 1810.0066
TRP 1820.0064
LEU 1830.0081
ARG 1840.0096
TYR 1850.0108
GLY 1860.0108
ASN 1870.0110
PRO 1880.0102
TRP 1890.0106
GLU 1900.0105
LYS 1910.0091
ALA 1920.0100
ARG 1930.0085
PRO 1940.0111
GLU 1950.0102
TYR 1960.0078
MET 1970.0060
LEU 1980.0033
PRO 1990.0017
VAL 2000.0025
HIS 2010.0089
PHE 2020.0076
TYR 2030.0074
GLY 2040.0088
ARG 2050.0097
VAL 2060.0166
GLU 2070.0231
HIS 2080.0276
THR 2090.0326
PRO 2100.0379
ASP 2110.0344
GLY 2120.0279
VAL 2130.0225
LYS 2140.0224
TRP 2150.0173
LEU 2160.0126
ASP 2170.0105
THR 2180.0094
GLN 2190.0077
VAL 2200.0094
VAL 2210.0049
LEU 2220.0036
ALA 2230.0035
MET 2240.0048
PRO 2250.0054
TYR 2260.0079
ASP 2270.0079
THR 2280.0080
PRO 2290.0080
VAL 2300.0083
PRO 2310.0100
GLY 2320.0109
TYR 2330.0111
LYS 2340.0126
ASN 2350.0140
ASN 2360.0188
THR 2370.0143
VAL 2380.0124
ASN 2390.0090
THR 2400.0096
MET 2410.0040
ARG 2420.0039
LEU 2430.0040
TRP 2440.0042
SER 2450.0046
ALA 2460.0052
LYS 2470.0056
ALA 2480.0073
PRO 2490.0081
ASN 2500.0088
ASP 2510.0250
ASP 2560.0240
PHE 2570.0173
ASN 2580.0148
VAL 2590.0094
GLY 2600.0011
ASP 2610.0065
TYR 2620.0118
ILE 2630.0124
GLU 2640.0115
ALA 2650.0139
VAL 2660.0120
LEU 2670.0120
ASP 2680.0112
ARG 2690.0100
ASN 2700.0097
LEU 2710.0074
ALA 2720.0063
GLU 2730.0052
ASN 2740.0055
ILE 2750.0052
SER 2760.0016
ARG 2770.0016
VAL 2780.0007
LEU 2790.0017
TYR 2800.0024
PRO 2810.0066
ASN 2820.0169
ASP 2830.0223
PHE 2860.0429
GLU 2870.0298
GLY 2880.0190
LYS 2890.0164
GLU 2900.0100
LEU 2910.0064
ARG 2920.0069
LEU 2930.0066
LYS 2940.0062
GLN 2950.0067
GLU 2960.0054
TYR 2970.0042
PHE 2980.0033
VAL 2990.0043
VAL 3000.0043
ALA 3010.0030
ALA 3020.0036
THR 3030.0031
LEU 3040.0038
GLN 3050.0049
ASP 3060.0092
ILE 3070.0076
ILE 3080.0119
ARG 3090.0133
ARG 3100.0107
PHE 3110.0160
LYS 3120.0210
SER 3130.0204
SER 3140.0169
LYS 3150.0189
PHE 3160.0258
THR 3240.0416
CYS 3250.0360
PHE 3260.0292
GLU 3270.0324
THR 3280.0274
PHE 3290.0185
PRO 3300.0176
ASP 3310.0174
LYS 3320.0135
VAL 3330.0105
ALA 3340.0070
ILE 3350.0067
GLN 3360.0066
LEU 3370.0066
ASN 3380.0065
ASP 3390.0078
THR 3400.0078
HIS 3410.0077
PRO 3420.0070
ALA 3430.0071
LEU 3440.0076
SER 3450.0070
ILE 3460.0075
PRO 3470.0074
GLU 3480.0067
LEU 3490.0094
MET 3500.0095
ARG 3510.0091
ILE 3520.0118
LEU 3530.0133
VAL 3540.0127
ASP 3550.0148
VAL 3560.0213
GLU 3570.0233
LYS 3580.0200
VAL 3590.0193
ASP 3600.0165
TRP 3610.0122
ASP 3620.0169
LYS 3630.0195
ALA 3640.0135
TRP 3650.0118
GLU 3660.0155
ILE 3670.0149
THR 3680.0107
LYS 3690.0098
LYS 3700.0115
THR 3710.0112
CYS 3720.0094
ALA 3730.0090
TYR 3740.0077
THR 3750.0079
ASN 3760.0082
HIS 3770.0086
THR 3780.0088
VAL 3790.0084
LEU 3800.0076
PRO 3810.0083
GLU 3820.0114
ALA 3830.0125
LEU 3840.0117
GLU 3850.0126
ARG 3860.0133
TRP 3870.0145
PRO 3880.0160
VAL 3890.0142
SER 3900.0161
MET 3910.0152
PHE 3920.0122
GLU 3930.0130
LYS 3940.0093
LEU 3950.0095
LEU 3960.0099
PRO 3970.0102
ARG 3980.0108
HIS 3990.0106
LEU 4000.0120
GLU 4010.0112
ILE 4020.0096
ILE 4030.0107
TYR 4040.0164
ALA 4050.0167
ILE 4060.0132
ASN 4070.0122
GLN 4080.0145
ARG 4090.0204
HIS 4100.0175
LEU 4110.0133
ASP 4120.0171
HIS 4130.0206
VAL 4140.0206
ALA 4150.0276
ALA 4160.0320
LEU 4170.0271
PHE 4180.0271
PRO 4190.0415
GLY 4200.0458
ASP 4210.0356
VAL 4220.0339
ASP 4230.0265
ARG 4240.0166
LEU 4250.0164
ARG 4260.0109
ARG 4270.0072
MET 4280.0062
SER 4290.0107
VAL 4300.0104
ILE 4310.0162
GLU 4320.0177
GLU 4330.0229
GLY 4340.0328
ASP 4350.0388
CYS 4360.0337
LYS 4370.0264
ARG 4380.0205
ILE 4390.0131
ASN 4400.0111
MET 4410.0105
ALA 4420.0085
HIS 4430.0073
LEU 4440.0092
CYS 4450.0086
VAL 4460.0071
ILE 4470.0073
GLY 4480.0078
SER 4490.0084
HIS 4500.0081
ALA 4510.0082
VAL 4520.0084
ASN 4530.0086
GLY 4540.0066
VAL 4550.0070
ALA 4560.0066
ARG 4570.0062
ILE 4580.0055
HIS 4590.0062
SER 4600.0056
GLU 4610.0046
ILE 4620.0044
VAL 4630.0046
LYS 4640.0026
GLN 4650.0025
SER 4660.0016
VAL 4670.0032
PHE 4680.0029
LYS 4690.0038
ASP 4700.0050
PHE 4710.0037
TYR 4720.0018
GLU 4730.0053
LEU 4740.0062
GLU 4750.0025
PRO 4760.0024
GLU 4770.0041
LYS 4780.0062
PHE 4790.0061
GLN 4800.0066
ASN 4810.0067
LYS 4820.0077
THR 4830.0075
ASN 4840.0047
GLY 4850.0036
ILE 4860.0026
THR 4870.0018
PRO 4880.0022
ARG 4890.0015
ARG 4900.0012
TRP 4910.0019
LEU 4920.0020
LEU 4930.0017
LEU 4940.0026
CYS 4950.0021
ASN 4960.0021
PRO 4970.0026
GLY 4980.0024
LEU 4990.0038
ALA 5000.0034
ASP 5010.0051
THR 5020.0054
ILE 5030.0043
VAL 5040.0047
GLU 5050.0070
LYS 5060.0065
ILE 5070.0038
GLY 5080.0034
GLU 5090.0027
GLU 5100.0034
PHE 5110.0025
LEU 5120.0028
THR 5130.0046
ASP 5140.0037
LEU 5150.0022
SER 5160.0022
GLN 5170.0014
LEU 5180.0016
LYS 5190.0037
LYS 5200.0044
LEU 5210.0061
LEU 5220.0069
PRO 5230.0091
LEU 5240.0107
VAL 5250.0112
SER 5260.0132
ASP 5270.0132
GLU 5280.0146
VAL 5290.0139
PHE 5300.0114
ILE 5310.0109
ARG 5320.0119
ASP 5330.0111
VAL 5340.0074
ALA 5350.0067
LYS 5360.0079
VAL 5370.0070
LYS 5380.0052
GLN 5390.0042
GLU 5400.0055
ASN 5410.0049
LYS 5420.0034
LEU 5430.0042
LYS 5440.0040
PHE 5450.0029
SER 5460.0028
ALA 5470.0039
PHE 5480.0034
LEU 5490.0021
GLU 5500.0031
LYS 5510.0043
GLU 5520.0037
TYR 5530.0032
LYS 5540.0036
VAL 5550.0029
LYS 5560.0028
ILE 5570.0016
ASN 5580.0019
PRO 5590.0016
SER 5600.0023
SER 5610.0025
MET 5620.0028
PHE 5630.0023
ASP 5640.0028
VAL 5650.0028
HIS 5660.0027
VAL 5670.0027
LYS 5680.0027
ARG 5690.0034
ILE 5700.0028
HIS 5710.0027
GLU 5720.0024
TYR 5730.0030
LYS 5740.0029
ARG 5750.0025
GLN 5760.0026
LEU 5770.0021
LEU 5780.0022
ASN 5790.0027
CYS 5800.0021
LEU 5810.0022
HIS 5820.0030
VAL 5830.0029
VAL 5840.0026
THR 5850.0037
LEU 5860.0042
TYR 5870.0039
ASN 5880.0042
ARG 5890.0062
ILE 5900.0068
LYS 5910.0067
ARG 5920.0075
ASP 5930.0087
PRO 5940.0089
ALA 5950.0103
LYS 5960.0097
ALA 5970.0091
PHE 5980.0075
VAL 5990.0050
PRO 6000.0041
ARG 6010.0034
THR 6020.0025
VAL 6030.0024
MET 6040.0019
ILE 6050.0021
GLY 6060.0018
GLY 6070.0020
LYS 6080.0021
ALA 6090.0025
ALA 6100.0026
PRO 6110.0032
GLY 6120.0033
TYR 6130.0030
HIS 6140.0028
MET 6150.0027
ALA 6160.0025
LYS 6170.0027
LEU 6180.0027
ILE 6190.0021
ILE 6200.0023
LYS 6210.0024
LEU 6220.0022
VAL 6230.0026
THR 6240.0025
SER 6250.0025
ILE 6260.0027
GLY 6270.0030
ASP 6280.0031
VAL 6290.0035
VAL 6300.0038
ASN 6310.0037
HIS 6320.0046
ASP 6330.0055
PRO 6340.0068
VAL 6350.0074
VAL 6360.0060
GLY 6370.0057
ASP 6380.0046
ARG 6390.0052
LEU 6400.0043
LYS 6410.0032
VAL 6420.0024
ILE 6430.0014
PHE 6440.0018
LEU 6450.0014
GLU 6460.0012
ASN 6470.0014
TYR 6480.0015
ARG 6490.0027
VAL 6500.0025
SER 6510.0025
LEU 6520.0017
ALA 6530.0011
GLU 6540.0023
LYS 6550.0017
VAL 6560.0017
ILE 6570.0018
PRO 6580.0008
ALA 6590.0026
ALA 6600.0024
ASP 6610.0025
LEU 6620.0027
SER 6630.0028
GLN 6640.0031
GLN 6650.0030
ILE 6660.0025
SER 6670.0026
THR 6680.0023
ALA 6690.0037
GLY 6700.0039
THR 6710.0045
GLU 6720.0048
ALA 6730.0053
SER 6740.0045
GLY 6750.0037
THR 6760.0036
GLY 6770.0026
ASN 6780.0028
MET 6790.0026
LYS 6800.0026
PHE 6810.0025
MET 6820.0025
LEU 6830.0027
ASN 6840.0030
GLY 6850.0029
ALA 6860.0027
LEU 6870.0028
THR 6880.0028
ILE 6890.0032
GLY 6900.0027
THR 6910.0021
MET 6920.0024
ASP 6930.0030
GLY 6940.0033
ALA 6950.0037
ASN 6960.0032
VAL 6970.0034
GLU 6980.0042
MET 6990.0030
ALA 7000.0027
GLU 7010.0029
GLU 7020.0034
ALA 7030.0035
GLY 7040.0047
ALA 7050.0038
GLU 7060.0051
ASN 7070.0048
LEU 7080.0032
PHE 7090.0033
ILE 7100.0023
PHE 7110.0015
GLY 7120.0006
LEU 7130.0005
ARG 7140.0019
VAL 7150.0059
GLU 7160.0091
ASP 7170.0085
VAL 7180.0074
GLU 7190.0155
ALA 7200.0176
LEU 7210.0130
ASP 7220.0167
ARG 7230.0229
LYS 7240.0166
GLY 7250.0129
TYR 7260.0079
ASN 7270.0045
ALA 7280.0038
ARG 7290.0047
GLU 7300.0057
TYR 7310.0051
TYR 7320.0051
ASP 7330.0069
HIS 7340.0066
LEU 7350.0043
PRO 7360.0030
GLU 7370.0016
LEU 7380.0016
LYS 7390.0029
GLN 7400.0024
ALA 7410.0019
VAL 7420.0022
ASP 7430.0038
GLN 7440.0029
ILE 7450.0029
SER 7460.0036
SER 7470.0042
GLY 7480.0043
PHE 7490.0032
PHE 7500.0035
SER 7510.0044
PRO 7520.0056
LYS 7530.0069
GLU 7540.0054
PRO 7550.0048
ASP 7560.0046
CYS 7570.0040
PHE 7580.0031
LYS 7590.0035
ASP 7600.0030
ILE 7610.0026
VAL 7620.0027
ASN 7630.0030
MET 7640.0018
LEU 7650.0017
MET 7660.0026
HIS 7670.0025
HIS 7680.0017
ASP 7690.0027
ARG 7700.0034
PHE 7710.0032
LYS 7720.0024
VAL 7730.0020
PHE 7740.0011
ALA 7750.0014
ASP 7760.0015
TYR 7770.0012
GLU 7780.0011
ALA 7790.0021
TYR 7800.0023
MET 7810.0024
GLN 7820.0026
CYS 7830.0029
GLN 7840.0040
ALA 7850.0048
GLN 7860.0052
VAL 7870.0046
ASP 7880.0046
GLN 7890.0061
LEU 7900.0059
TYR 7910.0042
ARG 7920.0043
ASN 7930.0051
PRO 7940.0066
LYS 7950.0087
GLU 7960.0081
TRP 7970.0059
THR 7980.0074
LYS 7990.0071
LYS 8000.0057
VAL 8010.0052
ILE 8020.0066
ARG 8030.0061
ASN 8040.0030
ILE 8050.0037
ALA 8060.0035
CYS 8070.0022
SER 8080.0023
GLY 8090.0033
LYS 8100.0036
PHE 8110.0030
SER 8120.0031
SER 8130.0033
ASP 8140.0046
ARG 8150.0063
THR 8160.0059
ILE 8170.0050
THR 8180.0066
GLU 8190.0083
TYR 8200.0072
ALA 8210.0066
ARG 8220.0089
GLU 8230.0102
ILE 8240.0107
TRP 8250.0080
GLY 8260.0090
VAL 8270.0066
GLU 8280.0080
PRO 8290.0125
SER 8300.0138
ASP 8310.0127
LEU 8320.0118
GLN 8330.0154
ILE 8340.0247
PRO 8350.0411
PRO 8360.0506
PRO 8370.0565
ASN 8380.0713
ILE 8390.0770

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: december 26th, 2025.