CNRS Nantes University US2B US2B
home |  start a new run |  job status |  references&downloads |  examples |  help  

Should you encounter any unexpected behaviour,
please let us know.
 elNémo has been hacked on november 27th.
It has been moved away and runs again.
**Still some additional cleaning from time to time**
Sorry for the inconvenience.


***  TRANSFERASE 03-MAR-16 5IKP  ***

<R2> analysis for 2604162227122643408

---  normal mode 35  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.0683
LEU 210.0027
GLY 220.0018
ASP 230.0011
VAL 240.0025
ALA 250.0027
GLU 260.0018
VAL 270.0013
ARG 280.0023
LYS 290.0030
SER 300.0026
PHE 310.0008
ASN 320.0030
ARG 330.0047
HIS 340.0037
LEU 350.0015
HIS 360.0064
PHE 370.0094
THR 380.0088
LEU 390.0051
VAL 400.0057
LYS 410.0027
ASP 420.0061
ARG 430.0073
ASN 440.0106
VAL 450.0077
ALA 460.0052
THR 470.0072
PRO 480.0082
ARG 490.0080
ASP 500.0055
TYR 510.0054
PHE 520.0070
PHE 530.0062
ALA 540.0043
LEU 550.0055
ALA 560.0082
HIS 570.0077
THR 580.0067
VAL 590.0078
ARG 600.0087
ASP 610.0095
HIS 620.0073
LEU 630.0092
VAL 640.0111
GLY 650.0098
ARG 660.0080
TRP 670.0091
ILE 680.0111
ARG 690.0095
THR 700.0071
GLN 710.0074
GLN 720.0083
HIS 730.0071
TYR 740.0056
TYR 750.0066
GLU 760.0061
ARG 770.0058
ASP 780.0044
PRO 790.0044
LYS 800.0036
ARG 810.0022
ILE 820.0024
TYR 830.0024
TYR 840.0028
LEU 850.0030
SER 860.0026
LEU 870.0031
GLU 880.0025
PHE 890.0017
TYR 900.0017
MET 910.0037
GLY 920.0038
ARG 930.0044
THR 940.0053
LEU 950.0062
GLN 960.0062
ASN 970.0057
THR 980.0061
MET 990.0066
VAL 1000.0062
ASN 1010.0073
LEU 1020.0067
GLY 1030.0065
LEU 1040.0057
GLN 1050.0057
ASN 1060.0068
ALA 1070.0039
CYS 1080.0043
ASP 1090.0066
GLU 1100.0057
ALA 1110.0045
ILE 1120.0060
TYR 1130.0085
GLN 1140.0074
LEU 1150.0065
GLY 1160.0068
LEU 1170.0068
ASP 1180.0075
LEU 1190.0070
GLU 1200.0084
GLU 1210.0066
LEU 1220.0064
GLU 1230.0066
GLU 1240.0068
ILE 1250.0067
GLU 1260.0058
GLU 1270.0046
ASP 1280.0037
ALA 1290.0039
GLY 1300.0034
LEU 1310.0025
GLY 1320.0022
ASN 1330.0025
GLY 1340.0028
GLY 1350.0028
LEU 1360.0030
GLY 1370.0020
ARG 1380.0018
LEU 1390.0025
ALA 1400.0016
ALA 1410.0030
CYS 1420.0034
PHE 1430.0031
LEU 1440.0031
ASP 1450.0038
SER 1460.0037
MET 1470.0030
ALA 1480.0042
THR 1490.0041
LEU 1500.0029
GLY 1510.0036
LEU 1520.0030
ALA 1530.0027
ALA 1540.0026
TYR 1550.0027
GLY 1560.0010
TYR 1570.0011
GLY 1580.0012
ILE 1590.0015
ARG 1600.0016
TYR 1610.0028
GLU 1620.0028
PHE 1630.0024
GLY 1640.0024
ILE 1650.0029
PHE 1660.0046
ASN 1670.0024
GLN 1680.0020
LYS 1690.0030
ILE 1700.0037
VAL 1710.0083
ASN 1720.0106
GLY 1730.0081
TRP 1740.0064
GLN 1750.0044
VAL 1760.0052
GLU 1770.0050
GLU 1780.0044
ALA 1790.0043
ASP 1800.0028
ASP 1810.0040
TRP 1820.0043
LEU 1830.0055
ARG 1840.0063
TYR 1850.0077
GLY 1860.0064
ASN 1870.0069
PRO 1880.0073
TRP 1890.0078
GLU 1900.0075
LYS 1910.0080
ALA 1920.0057
ARG 1930.0077
PRO 1940.0077
GLU 1950.0110
TYR 1960.0092
MET 1970.0086
LEU 1980.0084
PRO 1990.0096
VAL 2000.0090
HIS 2010.0122
PHE 2020.0139
TYR 2030.0175
GLY 2040.0201
ARG 2050.0214
VAL 2060.0172
GLU 2070.0160
HIS 2080.0114
THR 2090.0111
PRO 2100.0101
ASP 2110.0133
GLY 2120.0103
VAL 2130.0083
LYS 2140.0122
TRP 2150.0146
LEU 2160.0235
ASP 2170.0248
THR 2180.0201
GLN 2190.0179
VAL 2200.0147
VAL 2210.0078
LEU 2220.0071
ALA 2230.0060
MET 2240.0056
PRO 2250.0052
TYR 2260.0046
ASP 2270.0058
THR 2280.0067
PRO 2290.0082
VAL 2300.0082
PRO 2310.0073
GLY 2320.0053
TYR 2330.0068
LYS 2340.0073
ASN 2350.0051
ASN 2360.0061
THR 2370.0051
VAL 2380.0064
ASN 2390.0058
THR 2400.0069
MET 2410.0035
ARG 2420.0026
LEU 2430.0012
TRP 2440.0021
SER 2450.0029
ALA 2460.0044
LYS 2470.0037
ALA 2480.0046
PRO 2490.0056
ASN 2500.0046
ASP 2510.0683
ASP 2560.0532
PHE 2570.0363
ASN 2580.0278
VAL 2590.0142
GLY 2600.0094
ASP 2610.0158
TYR 2620.0270
ILE 2630.0310
GLU 2640.0262
ALA 2650.0273
VAL 2660.0212
LEU 2670.0204
ASP 2680.0165
ARG 2690.0125
ASN 2700.0111
LEU 2710.0076
ALA 2720.0049
GLU 2730.0028
ASN 2740.0049
ILE 2750.0066
SER 2760.0035
ARG 2770.0022
VAL 2780.0017
LEU 2790.0016
TYR 2800.0028
PRO 2810.0052
ASN 2820.0148
ASP 2830.0221
PHE 2860.0350
GLU 2870.0209
GLY 2880.0111
LYS 2890.0140
GLU 2900.0095
LEU 2910.0053
ARG 2920.0063
LEU 2930.0081
LYS 2940.0071
GLN 2950.0061
GLU 2960.0057
TYR 2970.0061
PHE 2980.0058
VAL 2990.0047
VAL 3000.0048
ALA 3010.0049
ALA 3020.0050
THR 3030.0035
LEU 3040.0031
GLN 3050.0039
ASP 3060.0036
ILE 3070.0036
ILE 3080.0039
ARG 3090.0046
ARG 3100.0055
PHE 3110.0093
LYS 3120.0101
SER 3130.0096
SER 3140.0070
LYS 3150.0052
PHE 3160.0091
THR 3240.0304
CYS 3250.0251
PHE 3260.0169
GLU 3270.0211
THR 3280.0159
PHE 3290.0077
PRO 3300.0074
ASP 3310.0078
LYS 3320.0060
VAL 3330.0050
ALA 3340.0042
ILE 3350.0043
GLN 3360.0044
LEU 3370.0047
ASN 3380.0048
ASP 3390.0049
THR 3400.0053
HIS 3410.0051
PRO 3420.0046
ALA 3430.0050
LEU 3440.0075
SER 3450.0058
ILE 3460.0070
PRO 3470.0071
GLU 3480.0056
LEU 3490.0060
MET 3500.0072
ARG 3510.0058
ILE 3520.0080
LEU 3530.0100
VAL 3540.0112
ASP 3550.0103
VAL 3560.0151
GLU 3570.0180
LYS 3580.0184
VAL 3590.0201
ASP 3600.0217
TRP 3610.0185
ASP 3620.0246
LYS 3630.0251
ALA 3640.0139
TRP 3650.0135
GLU 3660.0159
ILE 3670.0133
THR 3680.0103
LYS 3690.0101
LYS 3700.0094
THR 3710.0076
CYS 3720.0077
ALA 3730.0083
TYR 3740.0066
THR 3750.0053
ASN 3760.0043
HIS 3770.0031
THR 3780.0026
VAL 3790.0026
LEU 3800.0046
PRO 3810.0044
GLU 3820.0021
ALA 3830.0014
LEU 3840.0071
GLU 3850.0068
ARG 3860.0078
TRP 3870.0086
PRO 3880.0103
VAL 3890.0130
SER 3900.0146
MET 3910.0132
PHE 3920.0107
GLU 3930.0120
LYS 3940.0170
LEU 3950.0144
LEU 3960.0114
PRO 3970.0122
ARG 3980.0095
HIS 3990.0087
LEU 4000.0118
GLU 4010.0109
ILE 4020.0100
ILE 4030.0125
TYR 4040.0162
ALA 4050.0170
ILE 4060.0160
ASN 4070.0170
GLN 4080.0193
ARG 4090.0215
HIS 4100.0159
LEU 4110.0105
ASP 4120.0114
HIS 4130.0121
VAL 4140.0075
ALA 4150.0092
ALA 4160.0111
LEU 4170.0244
PHE 4180.0271
PRO 4190.0328
GLY 4200.0475
ASP 4210.0433
VAL 4220.0452
ASP 4230.0431
ARG 4240.0226
LEU 4250.0161
ARG 4260.0226
ARG 4270.0178
MET 4280.0053
SER 4290.0152
VAL 4300.0104
ILE 4310.0122
GLU 4320.0146
GLU 4330.0192
GLY 4340.0290
ASP 4350.0312
CYS 4360.0234
LYS 4370.0170
ARG 4380.0113
ILE 4390.0065
ASN 4400.0067
MET 4410.0060
ALA 4420.0062
HIS 4430.0064
LEU 4440.0084
CYS 4450.0087
VAL 4460.0083
ILE 4470.0085
GLY 4480.0096
SER 4490.0098
HIS 4500.0107
ALA 4510.0095
VAL 4520.0076
ASN 4530.0070
GLY 4540.0031
VAL 4550.0023
ALA 4560.0015
ARG 4570.0025
ILE 4580.0034
HIS 4590.0034
SER 4600.0062
GLU 4610.0090
ILE 4620.0079
VAL 4630.0067
LYS 4640.0124
GLN 4650.0149
SER 4660.0119
VAL 4670.0064
PHE 4680.0078
LYS 4690.0183
ASP 4700.0169
PHE 4710.0130
TYR 4720.0200
GLU 4730.0259
LEU 4740.0210
GLU 4750.0216
PRO 4760.0239
GLU 4770.0264
LYS 4780.0196
PHE 4790.0119
GLN 4800.0095
ASN 4810.0057
LYS 4820.0049
THR 4830.0025
ASN 4840.0040
GLY 4850.0040
ILE 4860.0037
THR 4870.0045
PRO 4880.0058
ARG 4890.0055
ARG 4900.0041
TRP 4910.0037
LEU 4920.0052
LEU 4930.0063
LEU 4940.0046
CYS 4950.0035
ASN 4960.0055
PRO 4970.0080
GLY 4980.0093
LEU 4990.0071
ALA 5000.0122
ASP 5010.0143
THR 5020.0093
ILE 5030.0122
VAL 5040.0185
GLU 5050.0184
LYS 5060.0159
ILE 5070.0204
GLY 5080.0243
GLU 5090.0225
GLU 5100.0233
PHE 5110.0189
LEU 5120.0160
THR 5130.0183
ASP 5140.0213
LEU 5150.0165
SER 5160.0195
GLN 5170.0203
LEU 5180.0154
LYS 5190.0212
LYS 5200.0207
LEU 5210.0143
LEU 5220.0182
PRO 5230.0201
LEU 5240.0147
VAL 5250.0183
SER 5260.0221
ASP 5270.0161
GLU 5280.0191
VAL 5290.0144
PHE 5300.0087
ILE 5310.0137
ARG 5320.0174
ASP 5330.0125
VAL 5340.0075
ALA 5350.0115
LYS 5360.0142
VAL 5370.0114
LYS 5380.0099
GLN 5390.0128
GLU 5400.0144
ASN 5410.0123
LYS 5420.0114
LEU 5430.0142
LYS 5440.0123
PHE 5450.0101
SER 5460.0105
ALA 5470.0125
PHE 5480.0115
LEU 5490.0092
GLU 5500.0106
LYS 5510.0127
GLU 5520.0113
TYR 5530.0089
LYS 5540.0095
VAL 5550.0079
LYS 5560.0085
ILE 5570.0089
ASN 5580.0097
PRO 5590.0110
SER 5600.0111
SER 5610.0091
MET 5620.0074
PHE 5630.0069
ASP 5640.0051
VAL 5650.0051
HIS 5660.0048
VAL 5670.0053
LYS 5680.0052
ARG 5690.0047
ILE 5700.0046
HIS 5710.0046
GLU 5720.0046
TYR 5730.0047
LYS 5740.0050
ARG 5750.0045
GLN 5760.0046
LEU 5770.0041
LEU 5780.0043
ASN 5790.0049
CYS 5800.0037
LEU 5810.0045
HIS 5820.0057
VAL 5830.0053
VAL 5840.0069
THR 5850.0094
LEU 5860.0103
TYR 5870.0103
ASN 5880.0120
ARG 5890.0139
ILE 5900.0146
LYS 5910.0155
ARG 5920.0176
ASP 5930.0194
PRO 5940.0141
ALA 5950.0149
LYS 5960.0150
ALA 5970.0123
PHE 5980.0106
VAL 5990.0078
PRO 6000.0076
ARG 6010.0066
THR 6020.0063
VAL 6030.0050
MET 6040.0048
ILE 6050.0046
GLY 6060.0045
GLY 6070.0044
LYS 6080.0041
ALA 6090.0038
ALA 6100.0052
PRO 6110.0053
GLY 6120.0065
TYR 6130.0051
HIS 6140.0070
MET 6150.0054
ALA 6160.0042
LYS 6170.0048
LEU 6180.0052
ILE 6190.0028
ILE 6200.0032
LYS 6210.0049
LEU 6220.0044
VAL 6230.0049
THR 6240.0060
SER 6250.0065
ILE 6260.0067
GLY 6270.0071
ASP 6280.0083
VAL 6290.0092
VAL 6300.0087
ASN 6310.0075
HIS 6320.0100
ASP 6330.0122
PRO 6340.0124
VAL 6350.0158
VAL 6360.0118
GLY 6370.0078
ASP 6380.0061
ARG 6390.0080
LEU 6400.0067
LYS 6410.0049
VAL 6420.0039
ILE 6430.0026
PHE 6440.0036
LEU 6450.0040
GLU 6460.0034
ASN 6470.0036
TYR 6480.0043
ARG 6490.0027
VAL 6500.0024
SER 6510.0017
LEU 6520.0025
ALA 6530.0030
GLU 6540.0041
LYS 6550.0043
VAL 6560.0044
ILE 6570.0042
PRO 6580.0040
ALA 6590.0069
ALA 6600.0056
ASP 6610.0052
LEU 6620.0040
SER 6630.0032
GLN 6640.0041
GLN 6650.0038
ILE 6660.0036
SER 6670.0041
THR 6680.0038
ALA 6690.0061
GLY 6700.0074
THR 6710.0077
GLU 6720.0060
ALA 6730.0050
SER 6740.0039
GLY 6750.0036
THR 6760.0036
GLY 6770.0031
ASN 6780.0030
MET 6790.0041
LYS 6800.0035
PHE 6810.0030
MET 6820.0044
LEU 6830.0047
ASN 6840.0026
GLY 6850.0026
ALA 6860.0031
LEU 6870.0038
THR 6880.0028
ILE 6890.0025
GLY 6900.0016
THR 6910.0023
MET 6920.0034
ASP 6930.0046
GLY 6940.0033
ALA 6950.0036
ASN 6960.0041
VAL 6970.0041
GLU 6980.0042
MET 6990.0072
ALA 7000.0082
GLU 7010.0093
GLU 7020.0092
ALA 7030.0090
GLY 7040.0098
ALA 7050.0090
GLU 7060.0098
ASN 7070.0073
LEU 7080.0055
PHE 7090.0029
ILE 7100.0026
PHE 7110.0025
GLY 7120.0019
LEU 7130.0032
ARG 7140.0123
VAL 7150.0176
GLU 7160.0242
ASP 7170.0186
VAL 7180.0148
GLU 7190.0274
ALA 7200.0257
LEU 7210.0131
ASP 7220.0215
ARG 7230.0278
LYS 7240.0090
GLY 7250.0082
TYR 7260.0062
ASN 7270.0091
ALA 7280.0133
ARG 7290.0126
GLU 7300.0127
TYR 7310.0097
TYR 7320.0096
ASP 7330.0127
HIS 7340.0129
LEU 7350.0107
PRO 7360.0094
GLU 7370.0088
LEU 7380.0068
LYS 7390.0068
GLN 7400.0069
ALA 7410.0067
VAL 7420.0046
ASP 7430.0050
GLN 7440.0074
ILE 7450.0063
SER 7460.0066
SER 7470.0088
GLY 7480.0112
PHE 7490.0118
PHE 7500.0118
SER 7510.0140
PRO 7520.0178
LYS 7530.0217
GLU 7540.0184
PRO 7550.0154
ASP 7560.0140
CYS 7570.0128
PHE 7580.0082
LYS 7590.0079
ASP 7600.0093
ILE 7610.0065
VAL 7620.0054
ASN 7630.0082
MET 7640.0088
LEU 7650.0075
MET 7660.0093
HIS 7670.0114
HIS 7680.0111
ASP 7690.0070
ARG 7700.0069
PHE 7710.0066
LYS 7720.0067
VAL 7730.0067
PHE 7740.0059
ALA 7750.0058
ASP 7760.0050
TYR 7770.0051
GLU 7780.0055
ALA 7790.0022
TYR 7800.0026
MET 7810.0028
GLN 7820.0017
CYS 7830.0007
GLN 7840.0014
ALA 7850.0027
GLN 7860.0025
VAL 7870.0016
ASP 7880.0036
GLN 7890.0064
LEU 7900.0065
TYR 7910.0064
ARG 7920.0080
ASN 7930.0094
PRO 7940.0176
LYS 7950.0181
GLU 7960.0157
TRP 7970.0107
THR 7980.0110
LYS 7990.0119
LYS 8000.0104
VAL 8010.0070
ILE 8020.0072
ARG 8030.0090
ASN 8040.0082
ILE 8050.0071
ALA 8060.0101
CYS 8070.0115
SER 8080.0098
GLY 8090.0089
LYS 8100.0079
PHE 8110.0069
SER 8120.0069
SER 8130.0058
ASP 8140.0038
ARG 8150.0032
THR 8160.0025
ILE 8170.0028
THR 8180.0023
GLU 8190.0028
TYR 8200.0037
ALA 8210.0042
ARG 8220.0042
GLU 8230.0047
ILE 8240.0045
TRP 8250.0045
GLY 8260.0045
VAL 8270.0042
GLU 8280.0039
PRO 8290.0033
SER 8300.0040
ASP 8310.0048
LEU 8320.0056
GLN 8330.0056
ILE 8340.0082
PRO 8350.0160
PRO 8360.0198
PRO 8370.0255
ASN 8380.0334
ILE 8390.0407

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: december 26th, 2025.