CNRS Nantes University US2B US2B
home |  start a new run |  job status |  references&downloads |  examples |  help  

Should you encounter any unexpected behaviour,
please let us know.
elNémo has been hacked on november 27th.
It has been moved away and runs again.
**Still some additional cleaning from time to time**
Sorry for the inconvenience.


***  PDHK1 and DCA  ***

<R2> analysis for 2604162351172680512

---  normal mode 100  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.0538
GLY 410.0245
VAL 420.0108
PRO 430.0153
GLY 440.0064
GLN 450.0075
VAL 460.0090
ASP 470.0088
PHE 480.0111
TYR 490.0092
ALA 500.0082
ARG 510.0083
PHE 520.0142
SER 530.0126
PRO 540.0139
SER 550.0117
PRO 560.0114
LEU 570.0083
SER 580.0091
MET 590.0078
LYS 600.0078
GLN 610.0065
PHE 620.0062
LEU 630.0084
ASP 640.0133
PHE 650.0145
GLY 660.0128
SER 670.0349
CYS 710.0256
GLU 720.0214
LYS 730.0422
THR 740.0358
SER 750.0170
PHE 760.0153
MET 770.0068
PHE 780.0061
LEU 790.0072
ARG 800.0077
GLN 810.0062
GLU 820.0067
LEU 830.0051
PRO 840.0076
VAL 850.0104
ARG 860.0103
LEU 870.0081
ALA 880.0081
ASN 890.0062
ILE 900.0067
MET 910.0062
LYS 920.0056
GLU 930.0057
ILE 940.0049
SER 950.0060
LEU 960.0075
LEU 970.0023
PRO 980.0048
ASP 990.0068
ASN 1000.0024
LEU 1010.0034
LEU 1020.0035
ARG 1030.0043
THR 1040.0052
PRO 1050.0035
SER 1060.0037
VAL 1070.0046
GLN 1080.0066
LEU 1090.0070
VAL 1100.0057
GLN 1110.0081
SER 1120.0109
TRP 1130.0084
TYR 1140.0106
ILE 1150.0132
GLN 1160.0140
SER 1170.0105
LEU 1180.0080
GLN 1190.0069
GLU 1200.0087
LEU 1210.0062
LEU 1220.0059
ASP 1230.0089
PHE 1240.0147
LYS 1250.0240
ASP 1260.0317
LYS 1270.0244
SER 1280.0378
ALA 1290.0199
GLU 1300.0260
ASP 1310.0508
ALA 1320.0538
LYS 1330.0265
ALA 1340.0288
ILE 1350.0216
TYR 1360.0241
ASP 1370.0144
PHE 1380.0089
THR 1390.0108
ASP 1400.0082
THR 1410.0122
VAL 1420.0129
ILE 1430.0146
ARG 1440.0170
ILE 1450.0164
ARG 1460.0138
ASN 1470.0156
ARG 1480.0159
HIS 1490.0080
ASN 1500.0049
ASP 1510.0117
VAL 1520.0060
ILE 1530.0105
PRO 1540.0117
THR 1550.0057
MET 1560.0029
ALA 1570.0025
GLN 1580.0081
GLY 1590.0076
VAL 1600.0071
ILE 1610.0068
GLU 1620.0047
TYR 1630.0064
LYS 1640.0067
GLU 1650.0221
SER 1660.0242
PHE 1670.0103
ASP 1700.0043
PRO 1710.0124
VAL 1720.0165
THR 1730.0182
SER 1740.0139
GLN 1750.0148
ASN 1760.0083
VAL 1770.0069
GLN 1780.0081
TYR 1790.0050
PHE 1800.0026
LEU 1810.0029
ASP 1820.0040
ARG 1830.0045
PHE 1840.0037
TYR 1850.0036
MET 1860.0042
SER 1870.0056
ARG 1880.0087
ILE 1890.0075
SER 1900.0092
ILE 1910.0086
ARG 1920.0103
MET 1930.0088
LEU 1940.0077
LEU 1950.0078
ASN 1960.0083
GLN 1970.0057
HIS 1980.0073
SER 1990.0096
LEU 2000.0079
LEU 2010.0044
PHE 2020.0143
GLY 2030.0221
HIS 2150.0170
ILE 2160.0118
GLY 2170.0095
SER 2180.0100
ILE 2190.0052
ASN 2200.0043
PRO 2210.0059
ASN 2220.0080
CYS 2230.0098
ASN 2240.0110
VAL 2250.0085
LEU 2260.0070
GLU 2270.0140
VAL 2280.0134
ILE 2290.0102
LYS 2300.0115
ASP 2310.0131
GLY 2320.0130
TYR 2330.0093
GLU 2340.0091
ASN 2350.0097
ALA 2360.0082
ARG 2370.0049
ARG 2380.0046
LEU 2390.0044
CYS 2400.0030
ASP 2410.0065
LEU 2420.0076
TYR 2430.0096
TYR 2440.0101
ILE 2450.0174
ASN 2460.0099
SER 2470.0053
PRO 2480.0106
GLU 2490.0087
LEU 2500.0065
GLU 2510.0108
LEU 2520.0077
GLU 2530.0141
GLU 2540.0150
LEU 2550.0099
ASN 2560.0087
ALA 2570.0072
LYS 2580.0080
SER 2590.0214
PRO 2600.0144
GLY 2610.0157
GLN 2620.0130
PRO 2630.0220
ILE 2640.0085
GLN 2650.0112
VAL 2660.0100
VAL 2670.0053
TYR 2680.0052
VAL 2690.0054
PRO 2700.0057
SER 2710.0040
HIS 2720.0035
LEU 2730.0053
TYR 2740.0080
HIS 2750.0048
HIS 2750.0048
MET 2760.0052
VAL 2770.0085
PHE 2780.0087
GLU 2790.0033
LEU 2800.0030
PHE 2810.0051
LYS 2820.0022
ASN 2830.0068
ALA 2840.0048
MET 2850.0050
ARG 2860.0057
ALA 2870.0125
THR 2880.0123
MET 2890.0109
GLU 2900.0109
HIS 2910.0147
HIS 2920.0142
ALA 2930.0175
ASN 2940.0256
ARG 2950.0101
GLY 2960.0075
VAL 2970.0101
TYR 2980.0154
PRO 2990.0172
PRO 3000.0139
ILE 3010.0088
GLN 3020.0072
VAL 3030.0070
HIS 3040.0064
VAL 3050.0040
THR 3060.0056
LEU 3070.0068
GLY 3080.0071
ASN 3090.0084
GLU 3100.0110
ASP 3110.0093
LEU 3120.0067
THR 3130.0100
VAL 3140.0086
LYS 3150.0057
MET 3160.0028
SER 3170.0023
ASP 3180.0038
ARG 3190.0081
GLY 3200.0125
GLY 3210.0107
GLY 3220.0257
VAL 3230.0302
PRO 3240.0204
LEU 3250.0338
ARG 3260.0404
LYS 3270.0108
ILE 3280.0028
ASP 3290.0276
ARG 3300.0282
LEU 3310.0192
PHE 3320.0167
ASN 3330.0186
TYR 3340.0142
MET 3350.0282
TYR 3360.0531
SER 3370.0274
THR 3380.0153
ALA 3390.0131
PRO 3400.0261
ARG 3410.0313
PRO 3420.0375
ARG 3430.0271
VAL 3440.0147
GLU 3450.0092
THR 3460.0184
SER 3470.0148
ARG 3480.0204
ALA 3490.0084
VAL 3500.0146
PRO 3510.0156
LEU 3520.0086
ALA 3530.0090
GLY 3540.0149
PHE 3550.0077
GLY 3560.0130
TYR 3570.0084
GLY 3580.0084
LEU 3590.0082
PRO 3600.0088
ILE 3610.0040
SER 3620.0049
ARG 3630.0069
LEU 3640.0043
TYR 3650.0047
ALA 3660.0059
GLN 3670.0069
TYR 3680.0052
PHE 3690.0069
GLN 3700.0063
GLY 3710.0091
ASP 3720.0111
LEU 3730.0068
LYS 3740.0086
LEU 3750.0225
TYR 3760.0299
TYR 3760.0290
SER 3770.0366
LEU 3780.0274
GLU 3790.0274
GLY 3800.0384
TYR 3810.0185
GLY 3820.0172
THR 3830.0217
ASP 3840.0178
ALA 3850.0088
VAL 3860.0066
ILE 3870.0096
TYR 3880.0130
ILE 3890.0112
LYS 3900.0106
ALA 3910.0130
LEU 3920.0145
SER 3930.0129
THR 3940.0128
ASP 3950.0122
SER 3960.0101
ILE 3970.0077
GLU 3980.0077
ARG 3990.0080
LEU 4000.0084
PRO 4010.0068
VAL 4020.0053
TYR 4030.0062
ASN 4040.0084
LYS 4050.0132
ALA 4060.0104
ALA 4070.0100
TRP 4080.0131
LYS 4090.0097
HIS 4100.0100
TYR 4110.0083
ASN 4120.0102
THR 4130.0053
ASN 4140.0228
ALA 4170.0119
ASP 4180.0042
ASP 4190.0073
TRP 4200.0084
CYS 4210.0027
VAL 4220.0023
PRO 4230.0081

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: december 26th, 2025.