CNRS Nantes University US2B US2B
home |  start a new run |  job status |  references&downloads |  examples |  help  

Should you encounter any unexpected behaviour,
please let us know.
elNémo has been hacked on november 27th.
It has been moved away and runs again.
**Still some additional cleaning from time to time**
Sorry for the inconvenience.


***  PDHK1 and DCA  ***

<R2> analysis for 2604162351172680512

---  normal mode 104  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.0870
GLY 410.0220
VAL 420.0075
PRO 430.0083
GLY 440.0103
GLN 450.0088
VAL 460.0056
ASP 470.0110
PHE 480.0144
TYR 490.0035
ALA 500.0063
ARG 510.0218
PHE 520.0165
SER 530.0131
PRO 540.0148
SER 550.0123
PRO 560.0094
LEU 570.0037
SER 580.0115
MET 590.0170
LYS 600.0321
GLN 610.0170
PHE 620.0041
LEU 630.0099
ASP 640.0153
PHE 650.0151
GLY 660.0120
SER 670.0157
CYS 710.0102
GLU 720.0078
LYS 730.0186
THR 740.0198
SER 750.0077
PHE 760.0056
MET 770.0052
PHE 780.0057
LEU 790.0035
ARG 800.0038
GLN 810.0063
GLU 820.0072
LEU 830.0061
PRO 840.0072
VAL 850.0080
ARG 860.0079
LEU 870.0082
ALA 880.0061
ASN 890.0032
ILE 900.0040
MET 910.0059
LYS 920.0032
GLU 930.0034
ILE 940.0021
SER 950.0014
LEU 960.0040
LEU 970.0055
PRO 980.0087
ASP 990.0136
ASN 1000.0137
LEU 1010.0161
LEU 1020.0180
ARG 1030.0194
THR 1040.0232
PRO 1050.0160
SER 1060.0146
VAL 1070.0159
GLN 1080.0160
LEU 1090.0100
VAL 1100.0076
GLN 1110.0081
SER 1120.0065
TRP 1130.0097
TYR 1140.0109
ILE 1150.0155
GLN 1160.0155
SER 1170.0157
LEU 1180.0139
GLN 1190.0157
GLU 1200.0125
LEU 1210.0090
LEU 1220.0100
ASP 1230.0108
PHE 1240.0058
LYS 1250.0178
ASP 1260.0383
LYS 1270.0148
SER 1280.0222
ALA 1290.0059
GLU 1300.0067
ASP 1310.0268
ALA 1320.0266
LYS 1330.0330
ALA 1340.0251
ILE 1350.0146
TYR 1360.0081
ASP 1370.0093
PHE 1380.0099
THR 1390.0123
ASP 1400.0108
THR 1410.0113
VAL 1420.0103
ILE 1430.0082
ARG 1440.0092
ILE 1450.0083
ARG 1460.0039
ASN 1470.0059
ARG 1480.0111
HIS 1490.0108
ASN 1500.0094
ASP 1510.0090
VAL 1520.0060
ILE 1530.0023
PRO 1540.0021
THR 1550.0062
MET 1560.0067
ALA 1570.0046
GLN 1580.0078
GLY 1590.0135
VAL 1600.0135
ILE 1610.0130
GLU 1620.0103
TYR 1630.0160
LYS 1640.0177
GLU 1650.0233
SER 1660.0252
PHE 1670.0206
ASP 1700.0230
PRO 1710.0264
VAL 1720.0072
THR 1730.0055
SER 1740.0088
GLN 1750.0111
ASN 1760.0053
VAL 1770.0053
GLN 1780.0104
TYR 1790.0110
PHE 1800.0086
LEU 1810.0087
ASP 1820.0092
ARG 1830.0084
PHE 1840.0074
TYR 1850.0053
MET 1860.0071
SER 1870.0069
ARG 1880.0060
ILE 1890.0060
SER 1900.0060
ILE 1910.0047
ARG 1920.0045
MET 1930.0057
LEU 1940.0051
LEU 1950.0052
ASN 1960.0085
GLN 1970.0092
HIS 1980.0110
SER 1990.0090
LEU 2000.0148
LEU 2010.0173
PHE 2020.0145
GLY 2030.0168
HIS 2150.0280
ILE 2160.0169
GLY 2170.0154
SER 2180.0128
ILE 2190.0041
ASN 2200.0074
PRO 2210.0267
ASN 2220.0245
CYS 2230.0118
ASN 2240.0132
VAL 2250.0193
LEU 2260.0231
GLU 2270.0289
VAL 2280.0274
ILE 2290.0251
LYS 2300.0251
ASP 2310.0252
GLY 2320.0174
TYR 2330.0139
GLU 2340.0110
ASN 2350.0111
ALA 2360.0117
ARG 2370.0122
ARG 2380.0186
LEU 2390.0184
CYS 2400.0143
ASP 2410.0182
LEU 2420.0228
TYR 2430.0156
TYR 2440.0098
ILE 2450.0299
ASN 2460.0150
SER 2470.0100
PRO 2480.0077
GLU 2490.0106
LEU 2500.0072
GLU 2510.0016
LEU 2520.0028
GLU 2530.0214
GLU 2540.0089
LEU 2550.0100
ASN 2560.0125
ALA 2570.0223
LYS 2580.0355
SER 2590.0115
PRO 2600.0181
GLY 2610.0172
GLN 2620.0091
PRO 2630.0340
ILE 2640.0172
GLN 2650.0247
VAL 2660.0249
VAL 2670.0212
TYR 2680.0165
VAL 2690.0144
PRO 2700.0171
SER 2710.0173
HIS 2720.0123
LEU 2730.0117
TYR 2740.0119
HIS 2750.0034
HIS 2750.0034
MET 2760.0079
VAL 2770.0186
PHE 2780.0112
GLU 2790.0139
LEU 2800.0193
PHE 2810.0169
LYS 2820.0161
ASN 2830.0178
ALA 2840.0154
MET 2850.0086
ARG 2860.0097
ALA 2870.0072
THR 2880.0121
MET 2890.0138
GLU 2900.0123
HIS 2910.0194
HIS 2920.0224
ALA 2930.0313
ASN 2940.0373
ARG 2950.0241
GLY 2960.0210
VAL 2970.0142
TYR 2980.0165
PRO 2990.0098
PRO 3000.0101
ILE 3010.0029
GLN 3020.0041
VAL 3030.0123
HIS 3040.0154
VAL 3050.0145
THR 3060.0137
LEU 3070.0203
GLY 3080.0188
ASN 3090.0356
GLU 3100.0209
ASP 3110.0178
LEU 3120.0146
THR 3130.0194
VAL 3140.0195
LYS 3150.0163
MET 3160.0153
SER 3170.0073
ASP 3180.0098
ARG 3190.0106
GLY 3200.0070
GLY 3210.0055
GLY 3220.0045
VAL 3230.0022
PRO 3240.0086
LEU 3250.0127
ARG 3260.0078
LYS 3270.0069
ILE 3280.0092
ASP 3290.0170
ARG 3300.0194
LEU 3310.0136
PHE 3320.0137
ASN 3330.0095
TYR 3340.0079
MET 3350.0058
TYR 3360.0173
SER 3370.0061
THR 3380.0068
ALA 3390.0352
PRO 3400.0409
ARG 3410.0220
PRO 3420.0134
ARG 3430.0330
VAL 3440.0172
GLU 3450.0314
THR 3460.0552
SER 3470.0439
ARG 3480.0870
ALA 3490.0216
VAL 3500.0225
PRO 3510.0189
LEU 3520.0102
ALA 3530.0234
GLY 3540.0273
PHE 3550.0192
GLY 3560.0141
TYR 3570.0079
GLY 3580.0115
LEU 3590.0115
PRO 3600.0102
ILE 3610.0061
SER 3620.0042
ARG 3630.0036
LEU 3640.0082
TYR 3650.0091
ALA 3660.0105
GLN 3670.0157
TYR 3680.0147
PHE 3690.0150
GLN 3700.0159
GLY 3710.0171
ASP 3720.0116
LEU 3730.0074
LYS 3740.0090
LEU 3750.0102
TYR 3760.0139
TYR 3760.0139
SER 3770.0065
LEU 3780.0083
GLU 3790.0122
GLY 3800.0082
TYR 3810.0123
GLY 3820.0029
THR 3830.0118
ASP 3840.0117
ALA 3850.0160
VAL 3860.0153
ILE 3870.0156
TYR 3880.0179
ILE 3890.0116
LYS 3900.0102
ALA 3910.0112
LEU 3920.0075
SER 3930.0275
THR 3940.0229
ASP 3950.0120
SER 3960.0101
ILE 3970.0069
GLU 3980.0111
ARG 3990.0152
LEU 4000.0141
PRO 4010.0069
VAL 4020.0050
TYR 4030.0034
ASN 4040.0044
LYS 4050.0181
ALA 4060.0160
ALA 4070.0140
TRP 4080.0171
LYS 4090.0155
HIS 4100.0147
TYR 4110.0123
ASN 4120.0131
THR 4130.0200
ASN 4140.0529
ALA 4170.0062
ASP 4180.0044
ASP 4190.0055
TRP 4200.0074
CYS 4210.0009
VAL 4220.0016
PRO 4230.0097

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: december 26th, 2025.