CNRS Nantes University US2B US2B
home |  start a new run |  job status |  references&downloads |  examples |  help  

Should you encounter any unexpected behaviour,
please let us know.
elNémo has been hacked on november 27th.
It has been moved away and runs again.
**Still some additional cleaning from time to time**
Sorry for the inconvenience.


***  PDHK1 and DCA  ***

<R2> analysis for 2604162351172680512

---  normal mode 105  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.0917
GLY 410.0243
VAL 420.0139
PRO 430.0158
GLY 440.0068
GLN 450.0105
VAL 460.0119
ASP 470.0127
PHE 480.0113
TYR 490.0126
ALA 500.0170
ARG 510.0244
PHE 520.0294
SER 530.0181
PRO 540.0200
SER 550.0128
PRO 560.0045
LEU 570.0092
SER 580.0179
MET 590.0144
LYS 600.0239
GLN 610.0223
PHE 620.0136
LEU 630.0201
ASP 640.0305
PHE 650.0276
GLY 660.0238
SER 670.0917
CYS 710.0303
GLU 720.0127
LYS 730.0142
THR 740.0204
SER 750.0137
PHE 760.0095
MET 770.0065
PHE 780.0107
LEU 790.0134
ARG 800.0126
GLN 810.0146
GLU 820.0150
LEU 830.0103
PRO 840.0122
VAL 850.0177
ARG 860.0145
LEU 870.0085
ALA 880.0091
ASN 890.0088
ILE 900.0074
MET 910.0059
LYS 920.0060
GLU 930.0041
ILE 940.0039
SER 950.0067
LEU 960.0052
LEU 970.0032
PRO 980.0023
ASP 990.0059
ASN 1000.0085
LEU 1010.0024
LEU 1020.0044
ARG 1030.0134
THR 1040.0053
PRO 1050.0150
SER 1060.0084
VAL 1070.0054
GLN 1080.0160
LEU 1090.0184
VAL 1100.0116
GLN 1110.0158
SER 1120.0219
TRP 1130.0176
TYR 1140.0180
ILE 1150.0175
GLN 1160.0193
SER 1170.0192
LEU 1180.0164
GLN 1190.0199
GLU 1200.0211
LEU 1210.0259
LEU 1220.0253
ASP 1230.0315
PHE 1240.0291
LYS 1250.0361
ASP 1260.0361
LYS 1270.0299
SER 1280.0188
ALA 1290.0185
GLU 1300.0116
ASP 1310.0125
ALA 1320.0142
LYS 1330.0135
ALA 1340.0165
ILE 1350.0131
TYR 1360.0181
ASP 1370.0121
PHE 1380.0134
THR 1390.0162
ASP 1400.0203
THR 1410.0191
VAL 1420.0148
ILE 1430.0131
ARG 1440.0166
ILE 1450.0206
ARG 1460.0172
ASN 1470.0189
ARG 1480.0217
HIS 1490.0197
ASN 1500.0149
ASP 1510.0087
VAL 1520.0068
ILE 1530.0165
PRO 1540.0167
THR 1550.0144
MET 1560.0111
ALA 1570.0132
GLN 1580.0158
GLY 1590.0136
VAL 1600.0116
ILE 1610.0167
GLU 1620.0100
TYR 1630.0086
LYS 1640.0067
GLU 1650.0180
SER 1660.0133
PHE 1670.0072
ASP 1700.0083
PRO 1710.0106
VAL 1720.0053
THR 1730.0056
SER 1740.0069
GLN 1750.0069
ASN 1760.0040
VAL 1770.0065
GLN 1780.0073
TYR 1790.0037
PHE 1800.0032
LEU 1810.0050
ASP 1820.0033
ARG 1830.0037
PHE 1840.0025
TYR 1850.0027
MET 1860.0099
SER 1870.0067
ARG 1880.0050
ILE 1890.0054
SER 1900.0101
ILE 1910.0143
ARG 1920.0167
MET 1930.0128
LEU 1940.0135
LEU 1950.0164
ASN 1960.0181
GLN 1970.0189
HIS 1980.0156
SER 1990.0145
LEU 2000.0247
LEU 2010.0253
PHE 2020.0138
GLY 2030.0212
HIS 2150.0183
ILE 2160.0154
GLY 2170.0249
SER 2180.0177
ILE 2190.0100
ASN 2200.0148
PRO 2210.0176
ASN 2220.0199
CYS 2230.0194
ASN 2240.0201
VAL 2250.0181
LEU 2260.0180
GLU 2270.0294
VAL 2280.0051
ILE 2290.0091
LYS 2300.0144
ASP 2310.0144
GLY 2320.0056
TYR 2330.0042
GLU 2340.0095
ASN 2350.0134
ALA 2360.0102
ARG 2370.0059
ARG 2380.0090
LEU 2390.0095
CYS 2400.0095
ASP 2410.0152
LEU 2420.0192
TYR 2430.0099
TYR 2440.0056
ILE 2450.0223
ASN 2460.0101
SER 2470.0068
PRO 2480.0052
GLU 2490.0097
LEU 2500.0113
GLU 2510.0125
LEU 2520.0134
GLU 2530.0175
GLU 2540.0094
LEU 2550.0084
ASN 2560.0075
ALA 2570.0103
LYS 2580.0128
SER 2590.0143
PRO 2600.0194
GLY 2610.0268
GLN 2620.0139
PRO 2630.0399
ILE 2640.0169
GLN 2650.0176
VAL 2660.0211
VAL 2670.0163
TYR 2680.0164
VAL 2690.0131
PRO 2700.0174
SER 2710.0239
HIS 2720.0161
LEU 2730.0197
TYR 2740.0163
HIS 2750.0199
HIS 2750.0199
MET 2760.0192
VAL 2770.0145
PHE 2780.0146
GLU 2790.0140
LEU 2800.0141
PHE 2810.0058
LYS 2820.0078
ASN 2830.0105
ALA 2840.0092
MET 2850.0083
ARG 2860.0112
ALA 2870.0104
THR 2880.0048
MET 2890.0034
GLU 2900.0061
HIS 2910.0045
HIS 2920.0044
ALA 2930.0102
ASN 2940.0152
ARG 2950.0187
GLY 2960.0221
VAL 2970.0051
TYR 2980.0018
PRO 2990.0103
PRO 3000.0096
ILE 3010.0095
GLN 3020.0171
VAL 3030.0122
HIS 3040.0084
VAL 3050.0052
THR 3060.0047
LEU 3070.0115
GLY 3080.0113
ASN 3090.0316
GLU 3100.0140
ASP 3110.0083
LEU 3120.0097
THR 3130.0107
VAL 3140.0091
LYS 3150.0039
MET 3160.0033
SER 3170.0111
ASP 3180.0118
ARG 3190.0194
GLY 3200.0101
GLY 3210.0052
GLY 3220.0144
VAL 3230.0254
PRO 3240.0237
LEU 3250.0273
ARG 3260.0177
LYS 3270.0157
ILE 3280.0194
ASP 3290.0145
ARG 3300.0050
LEU 3310.0058
PHE 3320.0068
ASN 3330.0085
TYR 3340.0084
MET 3350.0082
TYR 3360.0066
SER 3370.0088
THR 3380.0072
ALA 3390.0510
PRO 3400.0822
ARG 3410.0325
PRO 3420.0252
ARG 3430.0211
VAL 3440.0230
GLU 3450.0114
THR 3460.0062
SER 3470.0373
ARG 3480.0269
ALA 3490.0337
VAL 3500.0266
PRO 3510.0155
LEU 3520.0062
ALA 3530.0324
GLY 3540.0418
PHE 3550.0185
GLY 3560.0157
TYR 3570.0129
GLY 3580.0168
LEU 3590.0110
PRO 3600.0092
ILE 3610.0110
SER 3620.0121
ARG 3630.0074
LEU 3640.0089
TYR 3650.0081
ALA 3660.0077
GLN 3670.0120
TYR 3680.0124
PHE 3690.0180
GLN 3700.0234
GLY 3710.0075
ASP 3720.0080
LEU 3730.0139
LYS 3740.0141
LEU 3750.0100
TYR 3760.0081
TYR 3760.0084
SER 3770.0157
LEU 3780.0142
GLU 3790.0214
GLY 3800.0275
TYR 3810.0109
GLY 3820.0138
THR 3830.0089
ASP 3840.0022
ALA 3850.0104
VAL 3860.0153
ILE 3870.0156
TYR 3880.0142
ILE 3890.0096
LYS 3900.0130
ALA 3910.0099
LEU 3920.0217
SER 3930.0161
THR 3940.0248
ASP 3950.0326
SER 3960.0244
ILE 3970.0190
GLU 3980.0199
ARG 3990.0224
LEU 4000.0181
PRO 4010.0137
VAL 4020.0092
TYR 4030.0094
ASN 4040.0080
LYS 4050.0036
ALA 4060.0117
ALA 4070.0103
TRP 4080.0089
LYS 4090.0114
HIS 4100.0134
TYR 4110.0087
ASN 4120.0109
THR 4130.0162
ASN 4140.0151
ALA 4170.0020
ASP 4180.0019
ASP 4190.0029
TRP 4200.0039
CYS 4210.0014
VAL 4220.0011
PRO 4230.0066

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: december 26th, 2025.