CNRS Nantes University US2B US2B
home |  start a new run |  job status |  references&downloads |  examples |  help  

Should you encounter any unexpected behaviour,
please let us know.
elNémo has been hacked on november 27th.
It has been moved away and runs again.
**Still some additional cleaning from time to time**
Sorry for the inconvenience.


***  PDHK1 and DCA  ***

<R2> analysis for 2604162351172680512

---  normal mode 106  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.0567
GLY 410.0320
VAL 420.0263
PRO 430.0390
GLY 440.0353
GLN 450.0204
VAL 460.0198
ASP 470.0239
PHE 480.0253
TYR 490.0166
ALA 500.0170
ARG 510.0252
PHE 520.0200
SER 530.0153
PRO 540.0168
SER 550.0188
PRO 560.0187
LEU 570.0095
SER 580.0113
MET 590.0183
LYS 600.0164
GLN 610.0098
PHE 620.0100
LEU 630.0068
ASP 640.0150
PHE 650.0103
GLY 660.0126
SER 670.0498
CYS 710.0138
GLU 720.0098
LYS 730.0055
THR 740.0062
SER 750.0052
PHE 760.0018
MET 770.0028
PHE 780.0021
LEU 790.0040
ARG 800.0044
GLN 810.0050
GLU 820.0052
LEU 830.0073
PRO 840.0079
VAL 850.0073
ARG 860.0081
LEU 870.0135
ALA 880.0156
ASN 890.0137
ILE 900.0094
MET 910.0137
LYS 920.0152
GLU 930.0049
ILE 940.0044
SER 950.0119
LEU 960.0115
LEU 970.0112
PRO 980.0142
ASP 990.0084
ASN 1000.0075
LEU 1010.0094
LEU 1020.0105
ARG 1030.0068
THR 1040.0096
PRO 1050.0106
SER 1060.0050
VAL 1070.0044
GLN 1080.0085
LEU 1090.0054
VAL 1100.0041
GLN 1110.0025
SER 1120.0027
TRP 1130.0062
TYR 1140.0066
ILE 1150.0044
GLN 1160.0112
SER 1170.0141
LEU 1180.0111
GLN 1190.0079
GLU 1200.0153
LEU 1210.0112
LEU 1220.0098
ASP 1230.0056
PHE 1240.0069
LYS 1250.0173
ASP 1260.0207
LYS 1270.0027
SER 1280.0019
ALA 1290.0074
GLU 1300.0103
ASP 1310.0056
ALA 1320.0066
LYS 1330.0062
ALA 1340.0060
ILE 1350.0031
TYR 1360.0050
ASP 1370.0069
PHE 1380.0068
THR 1390.0069
ASP 1400.0066
THR 1410.0108
VAL 1420.0114
ILE 1430.0121
ARG 1440.0112
ILE 1450.0136
ARG 1460.0135
ASN 1470.0118
ARG 1480.0103
HIS 1490.0082
ASN 1500.0107
ASP 1510.0077
VAL 1520.0055
ILE 1530.0075
PRO 1540.0124
THR 1550.0103
MET 1560.0103
ALA 1570.0128
GLN 1580.0119
GLY 1590.0092
VAL 1600.0097
ILE 1610.0124
GLU 1620.0103
TYR 1630.0157
LYS 1640.0127
GLU 1650.0264
SER 1660.0227
PHE 1670.0166
ASP 1700.0289
PRO 1710.0267
VAL 1720.0117
THR 1730.0055
SER 1740.0126
GLN 1750.0165
ASN 1760.0092
VAL 1770.0107
GLN 1780.0137
TYR 1790.0115
PHE 1800.0100
LEU 1810.0099
ASP 1820.0136
ARG 1830.0101
PHE 1840.0097
TYR 1850.0070
MET 1860.0197
SER 1870.0142
ARG 1880.0119
ILE 1890.0153
SER 1900.0150
ILE 1910.0106
ARG 1920.0126
MET 1930.0061
LEU 1940.0061
LEU 1950.0065
ASN 1960.0082
GLN 1970.0050
HIS 1980.0097
SER 1990.0107
LEU 2000.0094
LEU 2010.0097
PHE 2020.0135
GLY 2030.0173
HIS 2150.0469
ILE 2160.0318
GLY 2170.0289
SER 2180.0305
ILE 2190.0290
ASN 2200.0259
PRO 2210.0404
ASN 2220.0372
CYS 2230.0232
ASN 2240.0261
VAL 2250.0189
LEU 2260.0267
GLU 2270.0567
VAL 2280.0140
ILE 2290.0138
LYS 2300.0218
ASP 2310.0098
GLY 2320.0079
TYR 2330.0123
GLU 2340.0055
ASN 2350.0148
ALA 2360.0196
ARG 2370.0171
ARG 2380.0214
LEU 2390.0210
CYS 2400.0160
ASP 2410.0157
LEU 2420.0198
TYR 2430.0103
TYR 2440.0095
ILE 2450.0153
ASN 2460.0109
SER 2470.0083
PRO 2480.0086
GLU 2490.0154
LEU 2500.0167
GLU 2510.0168
LEU 2520.0132
GLU 2530.0351
GLU 2540.0229
LEU 2550.0258
ASN 2560.0197
ALA 2570.0184
LYS 2580.0167
SER 2590.0318
PRO 2600.0356
GLY 2610.0381
GLN 2620.0235
PRO 2630.0233
ILE 2640.0160
GLN 2650.0094
VAL 2660.0097
VAL 2670.0196
TYR 2680.0131
VAL 2690.0201
PRO 2700.0167
SER 2710.0196
HIS 2720.0165
LEU 2730.0134
TYR 2740.0153
HIS 2750.0203
HIS 2750.0203
MET 2760.0151
VAL 2770.0137
PHE 2780.0162
GLU 2790.0153
LEU 2800.0127
PHE 2810.0124
LYS 2820.0163
ASN 2830.0086
ALA 2840.0065
MET 2850.0092
ARG 2860.0047
ALA 2870.0047
THR 2880.0045
MET 2890.0052
GLU 2900.0068
HIS 2910.0077
HIS 2920.0065
ALA 2930.0066
ASN 2940.0067
ARG 2950.0088
GLY 2960.0059
VAL 2970.0043
TYR 2980.0047
PRO 2990.0104
PRO 3000.0114
ILE 3010.0076
GLN 3020.0071
VAL 3030.0038
HIS 3040.0155
VAL 3050.0103
THR 3060.0125
LEU 3070.0145
GLY 3080.0125
ASN 3090.0433
GLU 3100.0375
ASP 3110.0191
LEU 3120.0099
THR 3130.0100
VAL 3140.0102
LYS 3150.0076
MET 3160.0049
SER 3170.0035
ASP 3180.0058
ARG 3190.0132
GLY 3200.0081
GLY 3210.0103
GLY 3220.0080
VAL 3230.0052
PRO 3240.0096
LEU 3250.0164
ARG 3260.0119
LYS 3270.0055
ILE 3280.0085
ASP 3290.0100
ARG 3300.0041
LEU 3310.0091
PHE 3320.0102
ASN 3330.0099
TYR 3340.0122
MET 3350.0081
TYR 3360.0073
SER 3370.0139
THR 3380.0115
ALA 3390.0276
PRO 3400.0259
ARG 3410.0181
PRO 3420.0189
ARG 3430.0238
VAL 3440.0178
GLU 3450.0172
THR 3460.0210
SER 3470.0288
ARG 3480.0468
ALA 3490.0054
VAL 3500.0108
PRO 3510.0088
LEU 3520.0107
ALA 3530.0079
GLY 3540.0229
PHE 3550.0184
GLY 3560.0193
TYR 3570.0087
GLY 3580.0063
LEU 3590.0047
PRO 3600.0061
ILE 3610.0048
SER 3620.0102
ARG 3630.0124
LEU 3640.0171
TYR 3650.0187
ALA 3660.0236
GLN 3670.0328
TYR 3680.0287
PHE 3690.0219
GLN 3700.0259
GLY 3710.0297
ASP 3720.0237
LEU 3730.0143
LYS 3740.0061
LEU 3750.0142
TYR 3760.0179
TYR 3760.0178
SER 3770.0082
LEU 3780.0148
GLU 3790.0152
GLY 3800.0203
TYR 3810.0208
GLY 3820.0143
THR 3830.0102
ASP 3840.0119
ALA 3850.0063
VAL 3860.0048
ILE 3870.0119
TYR 3880.0174
ILE 3890.0187
LYS 3900.0217
ALA 3910.0166
LEU 3920.0248
SER 3930.0285
THR 3940.0261
ASP 3950.0236
SER 3960.0200
ILE 3970.0149
GLU 3980.0219
ARG 3990.0303
LEU 4000.0264
PRO 4010.0143
VAL 4020.0155
TYR 4030.0117
ASN 4040.0052
LYS 4050.0136
ALA 4060.0154
ALA 4070.0054
TRP 4080.0071
LYS 4090.0083
HIS 4100.0078
TYR 4110.0070
ASN 4120.0122
THR 4130.0188
ASN 4140.0316
ALA 4170.0029
ASP 4180.0032
ASP 4190.0042
TRP 4200.0059
CYS 4210.0025
VAL 4220.0022
PRO 4230.0106

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: december 26th, 2025.