CNRS Nantes University US2B US2B
home |  start a new run |  job status |  references&downloads |  examples |  help  

Should you encounter any unexpected behaviour,
please let us know.
elNémo has been hacked on november 27th.
It has been moved away and runs again.
**Still some additional cleaning from time to time**
Sorry for the inconvenience.


***  PDHK1 and DCA  ***

<R2> analysis for 2604162351172680512

---  normal mode 15  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.0685
GLY 410.0259
VAL 420.0211
PRO 430.0219
GLY 440.0221
GLN 450.0164
VAL 460.0147
ASP 470.0186
PHE 480.0172
TYR 490.0117
ALA 500.0128
ARG 510.0172
PHE 520.0142
SER 530.0122
PRO 540.0093
SER 550.0112
PRO 560.0116
LEU 570.0131
SER 580.0124
MET 590.0101
LYS 600.0124
GLN 610.0155
PHE 620.0144
LEU 630.0142
ASP 640.0180
PHE 650.0183
GLY 660.0193
SER 670.0230
CYS 710.0226
GLU 720.0186
LYS 730.0169
THR 740.0176
SER 750.0144
PHE 760.0106
MET 770.0107
PHE 780.0109
LEU 790.0072
ARG 800.0038
GLN 810.0050
GLU 820.0060
LEU 830.0028
PRO 840.0040
VAL 850.0053
ARG 860.0039
LEU 870.0038
ALA 880.0079
ASN 890.0080
ILE 900.0053
MET 910.0093
LYS 920.0133
GLU 930.0108
ILE 940.0096
SER 950.0166
LEU 960.0170
LEU 970.0119
PRO 980.0136
ASP 990.0168
ASN 1000.0137
LEU 1010.0091
LEU 1020.0127
ARG 1030.0163
THR 1040.0138
PRO 1050.0172
SER 1060.0133
VAL 1070.0106
GLN 1080.0159
LEU 1090.0168
VAL 1100.0117
GLN 1110.0126
SER 1120.0170
TRP 1130.0144
TYR 1140.0104
ILE 1150.0140
GLN 1160.0156
SER 1170.0110
LEU 1180.0093
GLN 1190.0129
GLU 1200.0117
LEU 1210.0070
LEU 1220.0082
ASP 1230.0096
PHE 1240.0048
LYS 1250.0048
ASP 1260.0047
LYS 1270.0034
SER 1280.0049
ALA 1290.0095
GLU 1300.0130
ASP 1310.0120
ALA 1320.0169
LYS 1330.0166
ALA 1340.0112
ILE 1350.0127
TYR 1360.0170
ASP 1370.0142
PHE 1380.0106
THR 1390.0134
ASP 1400.0156
THR 1410.0123
VAL 1420.0106
ILE 1430.0154
ARG 1440.0158
ILE 1450.0120
ARG 1460.0129
ASN 1470.0186
ARG 1480.0182
HIS 1490.0151
ASN 1500.0164
ASP 1510.0162
VAL 1520.0110
ILE 1530.0094
PRO 1540.0124
THR 1550.0121
MET 1560.0073
ALA 1570.0087
GLN 1580.0094
GLY 1590.0077
VAL 1600.0051
ILE 1610.0076
GLU 1620.0081
TYR 1630.0063
LYS 1640.0042
GLU 1650.0079
SER 1660.0096
PHE 1670.0074
ASP 1700.0115
PRO 1710.0140
VAL 1720.0181
THR 1730.0139
SER 1740.0093
GLN 1750.0138
ASN 1760.0125
VAL 1770.0060
GLN 1780.0078
TYR 1790.0115
PHE 1800.0065
LEU 1810.0056
ASP 1820.0089
ARG 1830.0078
PHE 1840.0039
TYR 1850.0074
MET 1860.0081
SER 1870.0067
ARG 1880.0063
ILE 1890.0092
SER 1900.0091
ILE 1910.0072
ARG 1920.0089
MET 1930.0109
LEU 1940.0104
LEU 1950.0103
ASN 1960.0123
GLN 1970.0137
HIS 1980.0141
SER 1990.0154
LEU 2000.0165
LEU 2010.0183
PHE 2020.0195
GLY 2030.0203
HIS 2150.0115
ILE 2160.0144
GLY 2170.0157
SER 2180.0116
ILE 2190.0094
ASN 2200.0062
PRO 2210.0039
ASN 2220.0061
CYS 2230.0096
ASN 2240.0174
VAL 2250.0151
LEU 2260.0194
GLU 2270.0213
VAL 2280.0151
ILE 2290.0134
LYS 2300.0185
ASP 2310.0186
GLY 2320.0131
TYR 2330.0134
GLU 2340.0189
ASN 2350.0189
ALA 2360.0142
ARG 2370.0155
ARG 2380.0208
LEU 2390.0184
CYS 2400.0151
ASP 2410.0175
LEU 2420.0206
TYR 2430.0188
TYR 2440.0162
ILE 2450.0186
ASN 2460.0150
SER 2470.0125
PRO 2480.0092
GLU 2490.0143
LEU 2500.0149
GLU 2510.0184
LEU 2520.0205
GLU 2530.0248
GLU 2540.0266
LEU 2550.0312
ASN 2560.0322
ALA 2570.0373
LYS 2580.0350
SER 2590.0407
PRO 2600.0431
GLY 2610.0421
GLN 2620.0397
PRO 2630.0319
ILE 2640.0236
GLN 2650.0144
VAL 2660.0076
VAL 2670.0011
TYR 2680.0029
VAL 2690.0055
PRO 2700.0070
SER 2710.0085
HIS 2720.0058
LEU 2730.0037
TYR 2740.0083
HIS 2750.0074
HIS 2750.0074
MET 2760.0041
VAL 2770.0040
PHE 2780.0084
GLU 2790.0070
LEU 2800.0037
PHE 2810.0050
LYS 2820.0090
ASN 2830.0077
ALA 2840.0033
MET 2850.0064
ARG 2860.0102
ALA 2870.0083
THR 2880.0047
MET 2890.0091
GLU 2900.0122
HIS 2910.0103
HIS 2920.0072
ALA 2930.0127
ASN 2940.0133
ARG 2950.0073
GLY 2960.0100
VAL 2970.0061
TYR 2980.0053
PRO 2990.0058
PRO 3000.0095
ILE 3010.0077
GLN 3020.0122
VAL 3030.0135
HIS 3040.0182
VAL 3050.0186
THR 3060.0229
LEU 3070.0228
GLY 3080.0268
ASN 3090.0275
GLU 3100.0218
ASP 3110.0176
LEU 3120.0140
THR 3130.0139
VAL 3140.0108
LYS 3150.0119
MET 3160.0075
SER 3170.0085
ASP 3180.0047
ARG 3190.0060
GLY 3200.0065
GLY 3210.0115
GLY 3220.0140
VAL 3230.0183
PRO 3240.0236
LEU 3250.0247
ARG 3260.0283
LYS 3270.0235
ILE 3280.0182
ASP 3290.0174
ARG 3300.0195
LEU 3310.0147
PHE 3320.0139
ASN 3330.0141
TYR 3340.0125
MET 3350.0100
TYR 3360.0165
SER 3370.0156
THR 3380.0141
ALA 3390.0159
PRO 3400.0169
ARG 3410.0152
PRO 3420.0201
ARG 3430.0221
VAL 3440.0371
GLU 3450.0270
THR 3460.0313
SER 3470.0670
ARG 3480.0307
ALA 3490.0193
VAL 3500.0201
PRO 3510.0187
LEU 3520.0147
ALA 3530.0155
GLY 3540.0174
PHE 3550.0147
GLY 3560.0136
TYR 3570.0120
GLY 3580.0126
LEU 3590.0108
PRO 3600.0115
ILE 3610.0104
SER 3620.0084
ARG 3630.0088
LEU 3640.0091
TYR 3650.0078
ALA 3660.0067
GLN 3670.0088
TYR 3680.0092
PHE 3690.0080
GLN 3700.0086
GLY 3710.0069
ASP 3720.0085
LEU 3730.0077
LYS 3740.0112
LEU 3750.0124
TYR 3760.0157
TYR 3760.0156
SER 3770.0157
LEU 3780.0181
GLU 3790.0196
GLY 3800.0169
TYR 3810.0136
GLY 3820.0105
THR 3830.0102
ASP 3840.0106
ALA 3850.0077
VAL 3860.0094
ILE 3870.0064
TYR 3880.0091
ILE 3890.0064
LYS 3900.0074
ALA 3910.0094
LEU 3920.0057
SER 3930.0050
THR 3940.0092
ASP 3950.0099
SER 3960.0079
ILE 3970.0098
GLU 3980.0104
ARG 3990.0094
LEU 4000.0095
PRO 4010.0104
VAL 4020.0116
TYR 4030.0143
ASN 4040.0207
LYS 4050.0300
ALA 4060.0299
ALA 4070.0222
TRP 4080.0249
LYS 4090.0315
HIS 4100.0265
TYR 4110.0229
ASN 4120.0311
THR 4130.0350
ASN 4140.0333
ALA 4170.0642
ASP 4180.0685
ASP 4190.0483
TRP 4200.0214
CYS 4210.0565
VAL 4220.0335
PRO 4230.0424

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: december 26th, 2025.