CNRS Nantes University US2B US2B
home |  start a new run |  job status |  references&downloads |  examples |  help  

Should you encounter any unexpected behaviour,
please let us know.
elNémo has been hacked on november 27th.
It has been moved away and runs again.
**Still some additional cleaning from time to time**
Sorry for the inconvenience.


***  PDHK1 and DCA  ***

<R2> analysis for 2604162351172680512

---  normal mode 17  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.0721
GLY 410.0268
VAL 420.0220
PRO 430.0218
GLY 440.0216
GLN 450.0176
VAL 460.0150
ASP 470.0159
PHE 480.0154
TYR 490.0116
ALA 500.0103
ARG 510.0107
PHE 520.0076
SER 530.0034
PRO 540.0013
SER 550.0016
PRO 560.0047
LEU 570.0061
SER 580.0078
MET 590.0090
LYS 600.0090
GLN 610.0073
PHE 620.0072
LEU 630.0083
ASP 640.0078
PHE 650.0084
GLY 660.0091
SER 670.0140
CYS 710.0142
GLU 720.0123
LYS 730.0158
THR 740.0139
SER 750.0099
PHE 760.0107
MET 770.0127
PHE 780.0083
LEU 790.0061
ARG 800.0101
GLN 810.0090
GLU 820.0045
LEU 830.0048
PRO 840.0085
VAL 850.0064
ARG 860.0049
LEU 870.0073
ALA 880.0094
ASN 890.0073
ILE 900.0079
MET 910.0109
LYS 920.0123
GLU 930.0106
ILE 940.0115
SER 950.0140
LEU 960.0148
LEU 970.0150
PRO 980.0182
ASP 990.0197
ASN 1000.0198
LEU 1010.0158
LEU 1020.0144
ARG 1030.0159
THR 1040.0140
PRO 1050.0114
SER 1060.0096
VAL 1070.0108
GLN 1080.0113
LEU 1090.0106
VAL 1100.0091
GLN 1110.0110
SER 1120.0115
TRP 1130.0092
TYR 1140.0086
ILE 1150.0119
GLN 1160.0117
SER 1170.0096
LEU 1180.0108
GLN 1190.0140
GLU 1200.0123
LEU 1210.0111
LEU 1220.0147
ASP 1230.0172
PHE 1240.0162
LYS 1250.0179
ASP 1260.0221
LYS 1270.0228
SER 1280.0243
ALA 1290.0219
GLU 1300.0259
ASP 1310.0250
ALA 1320.0222
LYS 1330.0208
ALA 1340.0186
ILE 1350.0145
TYR 1360.0129
ASP 1370.0128
PHE 1380.0101
THR 1390.0062
ASP 1400.0061
THR 1410.0074
VAL 1420.0036
ILE 1430.0016
ARG 1440.0054
ILE 1450.0061
ARG 1460.0049
ASN 1470.0055
ARG 1480.0079
HIS 1490.0079
ASN 1500.0089
ASP 1510.0096
VAL 1520.0085
ILE 1530.0090
PRO 1540.0091
THR 1550.0087
MET 1560.0089
ALA 1570.0096
GLN 1580.0090
GLY 1590.0109
VAL 1600.0133
ILE 1610.0144
GLU 1620.0146
TYR 1630.0175
LYS 1640.0201
GLU 1650.0219
SER 1660.0233
PHE 1670.0246
ASP 1700.0323
PRO 1710.0322
VAL 1720.0286
THR 1730.0224
SER 1740.0193
GLN 1750.0186
ASN 1760.0152
VAL 1770.0139
GLN 1780.0124
TYR 1790.0109
PHE 1800.0102
LEU 1810.0105
ASP 1820.0096
ARG 1830.0077
PHE 1840.0076
TYR 1850.0084
MET 1860.0086
SER 1870.0064
ARG 1880.0075
ILE 1890.0082
SER 1900.0067
ILE 1910.0050
ARG 1920.0072
MET 1930.0073
LEU 1940.0041
LEU 1950.0035
ASN 1960.0063
GLN 1970.0060
HIS 1980.0039
SER 1990.0029
LEU 2000.0061
LEU 2010.0071
PHE 2020.0070
GLY 2030.0043
HIS 2150.0129
ILE 2160.0101
GLY 2170.0094
SER 2180.0112
ILE 2190.0121
ASN 2200.0127
PRO 2210.0123
ASN 2220.0121
CYS 2230.0139
ASN 2240.0140
VAL 2250.0135
LEU 2260.0126
GLU 2270.0160
VAL 2280.0142
ILE 2290.0109
LYS 2300.0125
ASP 2310.0149
GLY 2320.0116
TYR 2330.0066
GLU 2340.0093
ASN 2350.0130
ALA 2360.0100
ARG 2370.0048
ARG 2380.0098
LEU 2390.0169
CYS 2400.0154
ASP 2410.0139
LEU 2420.0201
TYR 2430.0261
TYR 2440.0261
ILE 2450.0227
ASN 2460.0207
SER 2470.0161
PRO 2480.0180
GLU 2490.0170
LEU 2500.0141
GLU 2510.0165
LEU 2520.0156
GLU 2530.0128
GLU 2540.0139
LEU 2550.0144
ASN 2560.0156
ALA 2570.0142
LYS 2580.0151
SER 2590.0224
PRO 2600.0228
GLY 2610.0233
GLN 2620.0230
PRO 2630.0170
ILE 2640.0142
GLN 2650.0127
VAL 2660.0124
VAL 2670.0125
TYR 2680.0126
VAL 2690.0133
PRO 2700.0147
SER 2710.0155
HIS 2720.0139
LEU 2730.0136
TYR 2740.0148
HIS 2750.0143
HIS 2750.0143
MET 2760.0126
VAL 2770.0102
PHE 2780.0122
GLU 2790.0126
LEU 2800.0090
PHE 2810.0066
LYS 2820.0123
ASN 2830.0145
ALA 2840.0099
MET 2850.0145
ARG 2860.0235
ALA 2870.0281
THR 2880.0276
MET 2890.0332
GLU 2900.0427
HIS 2910.0475
HIS 2920.0502
ALA 2930.0566
ASN 2940.0721
ARG 2950.0691
GLY 2960.0579
VAL 2970.0515
TYR 2980.0378
PRO 2990.0315
PRO 3000.0233
ILE 3010.0129
GLN 3020.0144
VAL 3030.0086
HIS 3040.0091
VAL 3050.0085
THR 3060.0091
LEU 3070.0095
GLY 3080.0083
ASN 3090.0088
GLU 3100.0095
ASP 3110.0086
LEU 3120.0087
THR 3130.0065
VAL 3140.0063
LYS 3150.0045
MET 3160.0030
SER 3170.0103
ASP 3180.0160
ARG 3190.0270
GLY 3200.0301
GLY 3210.0328
GLY 3220.0250
VAL 3230.0272
PRO 3240.0314
LEU 3250.0314
ARG 3260.0410
LYS 3270.0331
ILE 3280.0222
ASP 3290.0184
ARG 3300.0148
LEU 3310.0118
PHE 3320.0119
ASN 3330.0112
TYR 3340.0129
MET 3350.0154
TYR 3360.0166
SER 3370.0156
THR 3380.0155
ALA 3390.0146
PRO 3400.0130
ARG 3410.0129
PRO 3420.0145
ARG 3430.0278
VAL 3440.0356
GLU 3450.0379
THR 3460.0360
SER 3470.0387
ARG 3480.0330
ALA 3490.0333
VAL 3500.0333
PRO 3510.0303
LEU 3520.0239
ALA 3530.0200
GLY 3540.0181
PHE 3550.0132
GLY 3560.0120
TYR 3570.0125
GLY 3580.0140
LEU 3590.0115
PRO 3600.0118
ILE 3610.0118
SER 3620.0124
ARG 3630.0117
LEU 3640.0114
TYR 3650.0121
ALA 3660.0116
GLN 3670.0108
TYR 3680.0100
PHE 3690.0106
GLN 3700.0110
GLY 3710.0112
ASP 3720.0109
LEU 3730.0107
LYS 3740.0096
LEU 3750.0093
TYR 3760.0087
TYR 3760.0083
SER 3770.0117
LEU 3780.0122
GLU 3790.0220
GLY 3800.0303
TYR 3810.0279
GLY 3820.0206
THR 3830.0118
ASP 3840.0048
ALA 3850.0053
VAL 3860.0059
ILE 3870.0086
TYR 3880.0093
ILE 3890.0105
LYS 3900.0107
ALA 3910.0104
LEU 3920.0110
SER 3930.0103
THR 3940.0100
ASP 3950.0109
SER 3960.0105
ILE 3970.0092
GLU 3980.0082
ARG 3990.0082
LEU 4000.0063
PRO 4010.0060
VAL 4020.0049
TYR 4030.0080
ASN 4040.0092
LYS 4050.0119
ALA 4060.0109
ALA 4070.0102
TRP 4080.0128
LYS 4090.0145
HIS 4100.0139
TYR 4110.0149
ASN 4120.0170
THR 4130.0170
ASN 4140.0215
ALA 4170.0321
ASP 4180.0372
ASP 4190.0396
TRP 4200.0257
CYS 4210.0313
VAL 4220.0179
PRO 4230.0044

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: december 26th, 2025.