CNRS Nantes University US2B US2B
home |  start a new run |  job status |  references&downloads |  examples |  help  

Should you encounter any unexpected behaviour,
please let us know.
elNémo has been hacked on november 27th.
It has been moved away and runs again.
**Still some additional cleaning from time to time**
Sorry for the inconvenience.


***  PDHK1 and DCA  ***

<R2> analysis for 2604162351172680512

---  normal mode 19  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.0605
GLY 410.0390
VAL 420.0298
PRO 430.0282
GLY 440.0314
GLN 450.0265
VAL 460.0201
ASP 470.0231
PHE 480.0268
TYR 490.0209
ALA 500.0166
ARG 510.0226
PHE 520.0232
SER 530.0201
PRO 540.0150
SER 550.0084
PRO 560.0083
LEU 570.0076
SER 580.0089
MET 590.0072
LYS 600.0126
GLN 610.0143
PHE 620.0125
LEU 630.0159
ASP 640.0210
PHE 650.0241
GLY 660.0266
SER 670.0369
CYS 710.0384
GLU 720.0330
LYS 730.0351
THR 740.0325
SER 750.0251
PHE 760.0215
MET 770.0248
PHE 780.0190
LEU 790.0144
ARG 800.0146
GLN 810.0161
GLU 820.0129
LEU 830.0112
PRO 840.0147
VAL 850.0142
ARG 860.0114
LEU 870.0116
ALA 880.0138
ASN 890.0125
ILE 900.0098
MET 910.0078
LYS 920.0079
GLU 930.0097
ILE 940.0062
SER 950.0074
LEU 960.0140
LEU 970.0164
PRO 980.0221
ASP 990.0229
ASN 1000.0244
LEU 1010.0171
LEU 1020.0130
ARG 1030.0173
THR 1040.0165
PRO 1050.0141
SER 1060.0093
VAL 1070.0073
GLN 1080.0076
LEU 1090.0089
VAL 1100.0077
GLN 1110.0083
SER 1120.0108
TRP 1130.0114
TYR 1140.0110
ILE 1150.0153
GLN 1160.0154
SER 1170.0127
LEU 1180.0145
GLN 1190.0180
GLU 1200.0137
LEU 1210.0129
LEU 1220.0185
ASP 1230.0160
PHE 1240.0154
LYS 1250.0242
ASP 1260.0268
LYS 1270.0218
SER 1280.0300
ALA 1290.0344
GLU 1300.0427
ASP 1310.0340
ALA 1320.0366
LYS 1330.0286
ALA 1340.0208
ILE 1350.0253
TYR 1360.0278
ASP 1370.0189
PHE 1380.0154
THR 1390.0202
ASP 1400.0207
THR 1410.0136
VAL 1420.0135
ILE 1430.0177
ARG 1440.0173
ILE 1450.0128
ARG 1460.0149
ASN 1470.0158
ARG 1480.0152
HIS 1490.0095
ASN 1500.0099
ASP 1510.0076
VAL 1520.0071
ILE 1530.0062
PRO 1540.0052
THR 1550.0064
MET 1560.0048
ALA 1570.0045
GLN 1580.0092
GLY 1590.0096
VAL 1600.0115
ILE 1610.0154
GLU 1620.0198
TYR 1630.0230
LYS 1640.0241
GLU 1650.0307
SER 1660.0369
PHE 1670.0386
ASP 1700.0444
PRO 1710.0452
VAL 1720.0454
THR 1730.0352
SER 1740.0309
GLN 1750.0330
ASN 1760.0262
VAL 1770.0189
GLN 1780.0173
TYR 1790.0201
PHE 1800.0134
LEU 1810.0093
ASP 1820.0112
ARG 1830.0132
PHE 1840.0093
TYR 1850.0091
MET 1860.0105
SER 1870.0100
ARG 1880.0094
ILE 1890.0090
SER 1900.0080
ILE 1910.0083
ARG 1920.0094
MET 1930.0082
LEU 1940.0103
LEU 1950.0121
ASN 1960.0164
GLN 1970.0163
HIS 1980.0200
SER 1990.0227
LEU 2000.0276
LEU 2010.0295
PHE 2020.0324
GLY 2030.0337
HIS 2150.0210
ILE 2160.0199
GLY 2170.0195
SER 2180.0141
ILE 2190.0098
ASN 2200.0094
PRO 2210.0105
ASN 2220.0081
CYS 2230.0022
ASN 2240.0033
VAL 2250.0051
LEU 2260.0051
GLU 2270.0035
VAL 2280.0052
ILE 2290.0078
LYS 2300.0073
ASP 2310.0093
GLY 2320.0095
TYR 2330.0100
GLU 2340.0107
ASN 2350.0118
ALA 2360.0113
ARG 2370.0119
ARG 2380.0136
LEU 2390.0144
CYS 2400.0134
ASP 2410.0144
LEU 2420.0163
TYR 2430.0156
TYR 2440.0145
ILE 2450.0154
ASN 2460.0139
SER 2470.0125
PRO 2480.0111
GLU 2490.0101
LEU 2500.0098
GLU 2510.0086
LEU 2520.0087
GLU 2530.0092
GLU 2540.0102
LEU 2550.0145
ASN 2560.0158
ALA 2570.0216
LYS 2580.0216
SER 2590.0219
PRO 2600.0210
GLY 2610.0169
GLN 2620.0162
PRO 2630.0105
ILE 2640.0096
GLN 2650.0073
VAL 2660.0070
VAL 2670.0059
TYR 2680.0028
VAL 2690.0039
PRO 2700.0052
SER 2710.0068
HIS 2720.0071
LEU 2730.0079
TYR 2740.0076
HIS 2750.0088
HIS 2750.0088
MET 2760.0089
VAL 2770.0087
PHE 2780.0093
GLU 2790.0096
LEU 2800.0098
PHE 2810.0099
LYS 2820.0104
ASN 2830.0105
ALA 2840.0103
MET 2850.0107
ARG 2860.0113
ALA 2870.0114
THR 2880.0114
MET 2890.0126
GLU 2900.0126
HIS 2910.0122
HIS 2920.0122
ALA 2930.0137
ASN 2940.0134
ARG 2950.0128
GLY 2960.0137
VAL 2970.0122
TYR 2980.0119
PRO 2990.0104
PRO 3000.0106
ILE 3010.0106
GLN 3020.0102
VAL 3030.0107
HIS 3040.0113
VAL 3050.0109
THR 3060.0135
LEU 3070.0137
GLY 3080.0182
ASN 3090.0214
GLU 3100.0183
ASP 3110.0138
LEU 3120.0107
THR 3130.0115
VAL 3140.0105
LYS 3150.0111
MET 3160.0110
SER 3170.0110
ASP 3180.0111
ARG 3190.0107
GLY 3200.0112
GLY 3210.0107
GLY 3220.0102
VAL 3230.0080
PRO 3240.0055
LEU 3250.0047
ARG 3260.0029
LYS 3270.0020
ILE 3280.0035
ASP 3290.0058
ARG 3300.0037
LEU 3310.0025
PHE 3320.0047
ASN 3330.0088
TYR 3340.0065
MET 3350.0137
TYR 3360.0094
SER 3370.0060
THR 3380.0073
ALA 3390.0089
PRO 3400.0117
ARG 3410.0134
PRO 3420.0138
ARG 3430.0282
VAL 3440.0401
GLU 3450.0360
THR 3460.0333
SER 3470.0373
ARG 3480.0327
ALA 3490.0199
VAL 3500.0183
PRO 3510.0147
LEU 3520.0126
ALA 3530.0104
GLY 3540.0079
PHE 3550.0075
GLY 3560.0062
TYR 3570.0036
GLY 3580.0071
LEU 3590.0073
PRO 3600.0069
ILE 3610.0079
SER 3620.0088
ARG 3630.0090
LEU 3640.0092
TYR 3650.0082
ALA 3660.0078
GLN 3670.0080
TYR 3680.0067
PHE 3690.0058
GLN 3700.0088
GLY 3710.0085
ASP 3720.0088
LEU 3730.0089
LYS 3740.0102
LEU 3750.0101
TYR 3760.0101
TYR 3760.0101
SER 3770.0100
LEU 3780.0096
GLU 3790.0095
GLY 3800.0104
TYR 3810.0108
GLY 3820.0110
THR 3830.0108
ASP 3840.0112
ALA 3850.0109
VAL 3860.0108
ILE 3870.0101
TYR 3880.0104
ILE 3890.0088
LYS 3900.0096
ALA 3910.0103
LEU 3920.0116
SER 3930.0089
THR 3940.0126
ASP 3950.0118
SER 3960.0071
ILE 3970.0067
GLU 3980.0060
ARG 3990.0086
LEU 4000.0081
PRO 4010.0160
VAL 4020.0179
TYR 4030.0174
ASN 4040.0229
LYS 4050.0309
ALA 4060.0367
ALA 4070.0269
TRP 4080.0253
LYS 4090.0375
HIS 4100.0364
TYR 4110.0302
ASN 4120.0378
THR 4130.0488
ASN 4140.0554
ALA 4170.0257
ASP 4180.0156
ASP 4190.0160
TRP 4200.0243
CYS 4210.0284
VAL 4220.0280
PRO 4230.0605

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: december 26th, 2025.