CNRS Nantes University US2B US2B
home |  start a new run |  job status |  references&downloads |  examples |  help  

Should you encounter any unexpected behaviour,
please let us know.
elNémo has been hacked on november 27th.
It has been moved away and runs again.
**Still some additional cleaning from time to time**
Sorry for the inconvenience.


***  PDHK1 and DCA  ***

<R2> analysis for 2604162351172680512

---  normal mode 20  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.1199
GLY 410.0026
VAL 420.0029
PRO 430.0050
GLY 440.0042
GLN 450.0025
VAL 460.0047
ASP 470.0057
PHE 480.0047
TYR 490.0044
ALA 500.0065
ARG 510.0067
PHE 520.0063
SER 530.0078
PRO 540.0083
SER 550.0083
PRO 560.0100
LEU 570.0108
SER 580.0100
MET 590.0089
LYS 600.0090
GLN 610.0100
PHE 620.0101
LEU 630.0094
ASP 640.0095
PHE 650.0080
GLY 660.0087
SER 670.0093
CYS 710.0039
GLU 720.0062
LYS 730.0091
THR 740.0056
SER 750.0014
PHE 760.0048
MET 770.0059
PHE 780.0030
LEU 790.0023
ARG 800.0017
GLN 810.0021
GLU 820.0053
LEU 830.0058
PRO 840.0046
VAL 850.0061
ARG 860.0083
LEU 870.0075
ALA 880.0066
ASN 890.0080
ILE 900.0087
MET 910.0073
LYS 920.0074
GLU 930.0078
ILE 940.0074
SER 950.0058
LEU 960.0063
LEU 970.0056
PRO 980.0041
ASP 990.0042
ASN 1000.0032
LEU 1010.0039
LEU 1020.0048
ARG 1030.0043
THR 1040.0039
PRO 1050.0050
SER 1060.0049
VAL 1070.0057
GLN 1080.0060
LEU 1090.0066
VAL 1100.0073
GLN 1110.0071
SER 1120.0065
TRP 1130.0076
TYR 1140.0074
ILE 1150.0058
GLN 1160.0063
SER 1170.0075
LEU 1180.0052
GLN 1190.0046
GLU 1200.0074
LEU 1210.0055
LEU 1220.0035
ASP 1230.0092
PHE 1240.0097
LYS 1250.0083
ASP 1260.0157
LYS 1270.0190
SER 1280.0221
ALA 1290.0189
GLU 1300.0244
ASP 1310.0253
ALA 1320.0244
LYS 1330.0262
ALA 1340.0203
ILE 1350.0155
TYR 1360.0194
ASP 1370.0184
PHE 1380.0121
THR 1390.0119
ASP 1400.0166
THR 1410.0127
VAL 1420.0108
ILE 1430.0138
ARG 1440.0152
ILE 1450.0124
ARG 1460.0137
ASN 1470.0149
ARG 1480.0138
HIS 1490.0114
ASN 1500.0130
ASP 1510.0097
VAL 1520.0086
ILE 1530.0080
PRO 1540.0063
THR 1550.0059
MET 1560.0059
ALA 1570.0019
GLN 1580.0015
GLY 1590.0023
VAL 1600.0018
ILE 1610.0023
GLU 1620.0015
TYR 1630.0016
LYS 1640.0013
GLU 1650.0018
SER 1660.0012
PHE 1670.0006
ASP 1700.0035
PRO 1710.0062
VAL 1720.0072
THR 1730.0055
SER 1740.0052
GLN 1750.0077
ASN 1760.0069
VAL 1770.0064
GLN 1780.0068
TYR 1790.0080
PHE 1800.0077
LEU 1810.0077
ASP 1820.0091
ARG 1830.0096
PHE 1840.0091
TYR 1850.0094
MET 1860.0113
SER 1870.0114
ARG 1880.0113
ILE 1890.0117
SER 1900.0121
ILE 1910.0109
ARG 1920.0118
MET 1930.0116
LEU 1940.0097
LEU 1950.0103
ASN 1960.0117
GLN 1970.0097
HIS 1980.0077
SER 1990.0113
LEU 2000.0108
LEU 2010.0081
PHE 2020.0098
GLY 2030.0135
HIS 2150.0083
ILE 2160.0099
GLY 2170.0105
SER 2180.0109
ILE 2190.0090
ASN 2200.0065
PRO 2210.0052
ASN 2220.0036
CYS 2230.0050
ASN 2240.0098
VAL 2250.0064
LEU 2260.0090
GLU 2270.0099
VAL 2280.0073
ILE 2290.0056
LYS 2300.0073
ASP 2310.0086
GLY 2320.0069
TYR 2330.0057
GLU 2340.0063
ASN 2350.0080
ALA 2360.0074
ARG 2370.0076
ARG 2380.0108
LEU 2390.0126
CYS 2400.0106
ASP 2410.0141
LEU 2420.0181
TYR 2430.0156
TYR 2440.0120
ILE 2450.0131
ASN 2460.0079
SER 2470.0055
PRO 2480.0053
GLU 2490.0043
LEU 2500.0055
GLU 2510.0085
LEU 2520.0079
GLU 2530.0111
GLU 2540.0136
LEU 2550.0200
ASN 2560.0252
ALA 2570.0321
LYS 2580.0335
SER 2590.0398
PRO 2600.0391
GLY 2610.0383
GLN 2620.0380
PRO 2630.0272
ILE 2640.0164
GLN 2650.0080
VAL 2660.0040
VAL 2670.0042
TYR 2680.0055
VAL 2690.0080
PRO 2700.0070
SER 2710.0094
HIS 2720.0078
LEU 2730.0050
TYR 2740.0065
HIS 2750.0077
HIS 2750.0077
MET 2760.0053
VAL 2770.0054
PHE 2780.0066
GLU 2790.0071
LEU 2800.0060
PHE 2810.0075
LYS 2820.0094
ASN 2830.0106
ALA 2840.0099
MET 2850.0098
ARG 2860.0133
ALA 2870.0156
THR 2880.0137
MET 2890.0133
GLU 2900.0196
HIS 2910.0231
HIS 2920.0214
ALA 2930.0237
ASN 2940.0302
ARG 2950.0268
GLY 2960.0180
VAL 2970.0162
TYR 2980.0120
PRO 2990.0131
PRO 3000.0095
ILE 3010.0081
GLN 3020.0073
VAL 3030.0054
HIS 3040.0051
VAL 3050.0076
THR 3060.0125
LEU 3070.0168
GLY 3080.0221
ASN 3090.0267
GLU 3100.0211
ASP 3110.0133
LEU 3120.0086
THR 3130.0055
VAL 3140.0023
LYS 3150.0023
MET 3160.0049
SER 3170.0089
ASP 3180.0117
ARG 3190.0167
GLY 3200.0178
GLY 3210.0225
GLY 3220.0187
VAL 3230.0165
PRO 3240.0151
LEU 3250.0116
ARG 3260.0149
LYS 3270.0147
ILE 3280.0113
ASP 3290.0090
ARG 3300.0085
LEU 3310.0066
PHE 3320.0063
ASN 3330.0051
TYR 3340.0047
MET 3350.0037
TYR 3360.0042
SER 3370.0038
THR 3380.0041
ALA 3390.0118
PRO 3400.0160
ARG 3410.0188
PRO 3420.0257
ARG 3430.0848
VAL 3440.1193
GLU 3450.1151
THR 3460.1070
SER 3470.1199
ARG 3480.0805
ALA 3490.0275
VAL 3500.0235
PRO 3510.0184
LEU 3520.0147
ALA 3530.0148
GLY 3540.0132
PHE 3550.0066
GLY 3560.0042
TYR 3570.0045
GLY 3580.0061
LEU 3590.0063
PRO 3600.0063
ILE 3610.0073
SER 3620.0066
ARG 3630.0068
LEU 3640.0085
TYR 3650.0084
ALA 3660.0071
GLN 3670.0089
TYR 3680.0100
PHE 3690.0092
GLN 3700.0095
GLY 3710.0070
ASP 3720.0059
LEU 3730.0039
LYS 3740.0030
LEU 3750.0051
TYR 3760.0062
TYR 3760.0061
SER 3770.0120
LEU 3780.0158
GLU 3790.0195
GLY 3800.0239
TYR 3810.0222
GLY 3820.0173
THR 3830.0116
ASP 3840.0076
ALA 3850.0045
VAL 3860.0009
ILE 3870.0027
TYR 3880.0051
ILE 3890.0056
LYS 3900.0076
ALA 3910.0077
LEU 3920.0066
SER 3930.0053
THR 3940.0080
ASP 3950.0099
SER 3960.0085
ILE 3970.0097
GLU 3980.0111
ARG 3990.0111
LEU 4000.0116
PRO 4010.0112
VAL 4020.0095
TYR 4030.0089
ASN 4040.0091
LYS 4050.0097
ALA 4060.0110
ALA 4070.0097
TRP 4080.0085
LYS 4090.0103
HIS 4100.0105
TYR 4110.0086
ASN 4120.0093
THR 4130.0118
ASN 4140.0136
ALA 4170.0058
ASP 4180.0034
ASP 4190.0055
TRP 4200.0046
CYS 4210.0093
VAL 4220.0050
PRO 4230.0212

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: december 26th, 2025.