CNRS Nantes University US2B US2B
home |  start a new run |  job status |  references&downloads |  examples |  help  

Should you encounter any unexpected behaviour,
please let us know.
elNémo has been hacked on november 27th.
It has been moved away and runs again.
**Still some additional cleaning from time to time**
Sorry for the inconvenience.


***  PDHK1 and DCA  ***

<R2> analysis for 2604162351172680512

---  normal mode 21  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.1333
GLY 410.0045
VAL 420.0044
PRO 430.0041
GLY 440.0041
GLN 450.0048
VAL 460.0037
ASP 470.0041
PHE 480.0031
TYR 490.0030
ALA 500.0029
ARG 510.0041
PHE 520.0026
SER 530.0019
PRO 540.0012
SER 550.0036
PRO 560.0055
LEU 570.0081
SER 580.0108
MET 590.0111
LYS 600.0142
GLN 610.0121
PHE 620.0107
LEU 630.0139
ASP 640.0151
PHE 650.0105
GLY 660.0137
SER 670.0183
CYS 710.0089
GLU 720.0108
LYS 730.0107
THR 740.0050
SER 750.0064
PHE 760.0082
MET 770.0066
PHE 780.0026
LEU 790.0043
ARG 800.0057
GLN 810.0024
GLU 820.0016
LEU 830.0031
PRO 840.0028
VAL 850.0010
ARG 860.0016
LEU 870.0031
ALA 880.0035
ASN 890.0037
ILE 900.0031
MET 910.0058
LYS 920.0073
GLU 930.0076
ILE 940.0061
SER 950.0140
LEU 960.0148
LEU 970.0102
PRO 980.0112
ASP 990.0122
ASN 1000.0073
LEU 1010.0041
LEU 1020.0076
ARG 1030.0112
THR 1040.0094
PRO 1050.0122
SER 1060.0089
VAL 1070.0056
GLN 1080.0092
LEU 1090.0074
VAL 1100.0042
GLN 1110.0050
SER 1120.0061
TRP 1130.0027
TYR 1140.0026
ILE 1150.0032
GLN 1160.0041
SER 1170.0054
LEU 1180.0048
GLN 1190.0070
GLU 1200.0087
LEU 1210.0075
LEU 1220.0076
ASP 1230.0127
PHE 1240.0134
LYS 1250.0130
ASP 1260.0169
LYS 1270.0202
SER 1280.0215
ALA 1290.0176
GLU 1300.0216
ASP 1310.0244
ALA 1320.0248
LYS 1330.0268
ALA 1340.0214
ILE 1350.0174
TYR 1360.0218
ASP 1370.0194
PHE 1380.0141
THR 1390.0138
ASP 1400.0165
THR 1410.0118
VAL 1420.0100
ILE 1430.0125
ARG 1440.0121
ILE 1450.0086
ARG 1460.0092
ASN 1470.0097
ARG 1480.0075
HIS 1490.0034
ASN 1500.0043
ASP 1510.0040
VAL 1520.0036
ILE 1530.0062
PRO 1540.0080
THR 1550.0074
MET 1560.0055
ALA 1570.0087
GLN 1580.0097
GLY 1590.0068
VAL 1600.0068
ILE 1610.0102
GLU 1620.0087
TYR 1630.0049
LYS 1640.0080
GLU 1650.0116
SER 1660.0086
PHE 1670.0040
ASP 1700.0227
PRO 1710.0329
VAL 1720.0333
THR 1730.0205
SER 1740.0160
GLN 1750.0242
ASN 1760.0158
VAL 1770.0098
GLN 1780.0115
TYR 1790.0135
PHE 1800.0070
LEU 1810.0070
ASP 1820.0082
ARG 1830.0067
PHE 1840.0034
TYR 1850.0049
MET 1860.0021
SER 1870.0020
ARG 1880.0017
ILE 1890.0017
SER 1900.0026
ILE 1910.0017
ARG 1920.0037
MET 1930.0045
LEU 1940.0047
LEU 1950.0061
ASN 1960.0080
GLN 1970.0073
HIS 1980.0088
SER 1990.0111
LEU 2000.0120
LEU 2010.0111
PHE 2020.0135
GLY 2030.0155
HIS 2150.0142
ILE 2160.0143
GLY 2170.0119
SER 2180.0104
ILE 2190.0111
ASN 2200.0115
PRO 2210.0137
ASN 2220.0119
CYS 2230.0097
ASN 2240.0093
VAL 2250.0103
LEU 2260.0121
GLU 2270.0130
VAL 2280.0111
ILE 2290.0116
LYS 2300.0133
ASP 2310.0125
GLY 2320.0112
TYR 2330.0124
GLU 2340.0150
ASN 2350.0140
ALA 2360.0119
ARG 2370.0137
ARG 2380.0173
LEU 2390.0155
CYS 2400.0135
ASP 2410.0159
LEU 2420.0189
TYR 2430.0179
TYR 2440.0164
ILE 2450.0183
ASN 2460.0142
SER 2470.0113
PRO 2480.0095
GLU 2490.0120
LEU 2500.0126
GLU 2510.0141
LEU 2520.0144
GLU 2530.0148
GLU 2540.0134
LEU 2550.0119
ASN 2560.0110
ALA 2570.0078
LYS 2580.0088
SER 2590.0146
PRO 2600.0154
GLY 2610.0182
GLN 2620.0180
PRO 2630.0126
ILE 2640.0102
GLN 2650.0083
VAL 2660.0086
VAL 2670.0108
TYR 2680.0084
VAL 2690.0074
PRO 2700.0071
SER 2710.0075
HIS 2720.0053
LEU 2730.0067
TYR 2740.0082
HIS 2750.0072
HIS 2750.0072
MET 2760.0065
VAL 2770.0080
PHE 2780.0088
GLU 2790.0065
LEU 2800.0067
PHE 2810.0084
LYS 2820.0078
ASN 2830.0058
ALA 2840.0066
MET 2850.0084
ARG 2860.0092
ALA 2870.0109
THR 2880.0100
MET 2890.0120
GLU 2900.0154
HIS 2910.0160
HIS 2920.0145
ALA 2930.0189
ASN 2940.0243
ARG 2950.0185
GLY 2960.0151
VAL 2970.0108
TYR 2980.0096
PRO 2990.0098
PRO 3000.0104
ILE 3010.0099
GLN 3020.0124
VAL 3030.0119
HIS 3040.0115
VAL 3050.0101
THR 3060.0084
LEU 3070.0068
GLY 3080.0044
ASN 3090.0081
GLU 3100.0084
ASP 3110.0049
LEU 3120.0058
THR 3130.0066
VAL 3140.0086
LYS 3150.0100
MET 3160.0089
SER 3170.0106
ASP 3180.0091
ARG 3190.0124
GLY 3200.0113
GLY 3210.0150
GLY 3220.0118
VAL 3230.0074
PRO 3240.0047
LEU 3250.0080
ARG 3260.0114
LYS 3270.0104
ILE 3280.0058
ASP 3290.0114
ARG 3300.0146
LEU 3310.0081
PHE 3320.0098
ASN 3330.0146
TYR 3340.0126
MET 3350.0137
TYR 3360.0155
SER 3370.0141
THR 3380.0122
ALA 3390.0157
PRO 3400.0164
ARG 3410.0163
PRO 3420.0174
ARG 3430.0187
VAL 3440.0168
GLU 3450.0175
THR 3460.0101
SER 3470.0090
ARG 3480.0101
ALA 3490.0220
VAL 3500.0174
PRO 3510.0132
LEU 3520.0116
ALA 3530.0099
GLY 3540.0100
PHE 3550.0135
GLY 3560.0118
TYR 3570.0088
GLY 3580.0077
LEU 3590.0057
PRO 3600.0075
ILE 3610.0059
SER 3620.0048
ARG 3630.0040
LEU 3640.0040
TYR 3650.0042
ALA 3660.0045
GLN 3670.0050
TYR 3680.0041
PHE 3690.0065
GLN 3700.0074
GLY 3710.0059
ASP 3720.0056
LEU 3730.0063
LYS 3740.0060
LEU 3750.0064
TYR 3760.0076
TYR 3760.0079
SER 3770.0101
LEU 3780.0137
GLU 3790.0152
GLY 3800.0193
TYR 3810.0179
GLY 3820.0128
THR 3830.0088
ASP 3840.0097
ALA 3850.0067
VAL 3860.0077
ILE 3870.0064
TYR 3880.0064
ILE 3890.0060
LYS 3900.0078
ALA 3910.0089
LEU 3920.0126
SER 3930.0133
THR 3940.0148
ASP 3950.0127
SER 3960.0103
ILE 3970.0093
GLU 3980.0061
ARG 3990.0042
LEU 4000.0028
PRO 4010.0038
VAL 4020.0041
TYR 4030.0072
ASN 4040.0135
LYS 4050.0292
ALA 4060.0296
ALA 4070.0206
TRP 4080.0253
LYS 4090.0355
HIS 4100.0310
TYR 4110.0259
ASN 4120.0367
THR 4130.0466
ASN 4140.0570
ALA 4170.0737
ASP 4180.0865
ASP 4190.0500
TRP 4200.0306
CYS 4210.0687
VAL 4220.0157
PRO 4230.1333

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: december 26th, 2025.