CNRS Nantes University US2B US2B
home |  start a new run |  job status |  references&downloads |  examples |  help  

Should you encounter any unexpected behaviour,
please let us know.
elNémo has been hacked on november 27th.
It has been moved away and runs again.
**Still some additional cleaning from time to time**
Sorry for the inconvenience.


***  PDHK1 and DCA  ***

<R2> analysis for 2604162351172680512

---  normal mode 23  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.0775
GLY 410.0182
VAL 420.0147
PRO 430.0150
GLY 440.0121
GLN 450.0083
VAL 460.0080
ASP 470.0077
PHE 480.0043
TYR 490.0022
ALA 500.0056
ARG 510.0043
PHE 520.0034
SER 530.0057
PRO 540.0066
SER 550.0078
PRO 560.0088
LEU 570.0108
SER 580.0114
MET 590.0121
LYS 600.0134
GLN 610.0145
PHE 620.0146
LEU 630.0157
ASP 640.0163
PHE 650.0166
GLY 660.0170
SER 670.0231
CYS 710.0122
GLU 720.0092
LYS 730.0171
THR 740.0193
SER 750.0121
PHE 760.0110
MET 770.0153
PHE 780.0125
LEU 790.0069
ARG 800.0079
GLN 810.0055
GLU 820.0057
LEU 830.0037
PRO 840.0017
VAL 850.0036
ARG 860.0062
LEU 870.0070
ALA 880.0069
ASN 890.0082
ILE 900.0090
MET 910.0108
LYS 920.0129
GLU 930.0119
ILE 940.0101
SER 950.0148
LEU 960.0153
LEU 970.0089
PRO 980.0067
ASP 990.0103
ASN 1000.0105
LEU 1010.0079
LEU 1020.0103
ARG 1030.0144
THR 1040.0127
PRO 1050.0141
SER 1060.0104
VAL 1070.0084
GLN 1080.0113
LEU 1090.0101
VAL 1100.0090
GLN 1110.0102
SER 1120.0097
TRP 1130.0096
TYR 1140.0087
ILE 1150.0077
GLN 1160.0084
SER 1170.0086
LEU 1180.0063
GLN 1190.0085
GLU 1200.0097
LEU 1210.0063
LEU 1220.0086
ASP 1230.0171
PHE 1240.0165
LYS 1250.0161
ASP 1260.0278
LYS 1270.0312
SER 1280.0347
ALA 1290.0308
GLU 1300.0374
ASP 1310.0356
ALA 1320.0293
LYS 1330.0306
ALA 1340.0262
ILE 1350.0171
TYR 1360.0164
ASP 1370.0186
PHE 1380.0113
THR 1390.0062
ASP 1400.0129
THR 1410.0107
VAL 1420.0066
ILE 1430.0100
ARG 1440.0137
ILE 1450.0111
ARG 1460.0121
ASN 1470.0142
ARG 1480.0148
HIS 1490.0127
ASN 1500.0136
ASP 1510.0114
VAL 1520.0094
ILE 1530.0063
PRO 1540.0072
THR 1550.0086
MET 1560.0068
ALA 1570.0076
GLN 1580.0119
GLY 1590.0108
VAL 1600.0098
ILE 1610.0145
GLU 1620.0159
TYR 1630.0132
LYS 1640.0165
GLU 1650.0233
SER 1660.0243
PHE 1670.0188
ASP 1700.0156
PRO 1710.0220
VAL 1720.0191
THR 1730.0115
SER 1740.0128
GLN 1750.0171
ASN 1760.0122
VAL 1770.0080
GLN 1780.0092
TYR 1790.0124
PHE 1800.0079
LEU 1810.0065
ASP 1820.0060
ARG 1830.0082
PHE 1840.0060
TYR 1850.0056
MET 1860.0065
SER 1870.0065
ARG 1880.0073
ILE 1890.0087
SER 1900.0090
ILE 1910.0083
ARG 1920.0099
MET 1930.0113
LEU 1940.0096
LEU 1950.0087
ASN 1960.0118
GLN 1970.0122
HIS 1980.0075
SER 1990.0090
LEU 2000.0131
LEU 2010.0123
PHE 2020.0063
GLY 2030.0095
HIS 2150.0179
ILE 2160.0180
GLY 2170.0170
SER 2180.0151
ILE 2190.0141
ASN 2200.0126
PRO 2210.0126
ASN 2220.0092
CYS 2230.0074
ASN 2240.0080
VAL 2250.0077
LEU 2260.0093
GLU 2270.0101
VAL 2280.0087
ILE 2290.0084
LYS 2300.0105
ASP 2310.0109
GLY 2320.0095
TYR 2330.0104
GLU 2340.0144
ASN 2350.0148
ALA 2360.0129
ARG 2370.0146
ARG 2380.0192
LEU 2390.0186
CYS 2400.0160
ASP 2410.0184
LEU 2420.0223
TYR 2430.0212
TYR 2440.0185
ILE 2450.0196
ASN 2460.0142
SER 2470.0111
PRO 2480.0069
GLU 2490.0083
LEU 2500.0082
GLU 2510.0076
LEU 2520.0088
GLU 2530.0079
GLU 2540.0080
LEU 2550.0082
ASN 2560.0086
ALA 2570.0100
LYS 2580.0089
SER 2590.0131
PRO 2600.0143
GLY 2610.0145
GLN 2620.0141
PRO 2630.0113
ILE 2640.0071
GLN 2650.0045
VAL 2660.0050
VAL 2670.0093
TYR 2680.0090
VAL 2690.0091
PRO 2700.0086
SER 2710.0078
HIS 2720.0069
LEU 2730.0054
TYR 2740.0067
HIS 2750.0056
HIS 2750.0056
MET 2760.0045
VAL 2770.0054
PHE 2780.0076
GLU 2790.0042
LEU 2800.0049
PHE 2810.0073
LYS 2820.0090
ASN 2830.0058
ALA 2840.0056
MET 2850.0085
ARG 2860.0107
ALA 2870.0096
THR 2880.0082
MET 2890.0118
GLU 2900.0159
HIS 2910.0150
HIS 2920.0129
ALA 2930.0183
ASN 2940.0229
ARG 2950.0178
GLY 2960.0120
VAL 2970.0077
TYR 2980.0059
PRO 2990.0055
PRO 3000.0050
ILE 3010.0050
GLN 3020.0060
VAL 3030.0063
HIS 3040.0052
VAL 3050.0053
THR 3060.0041
LEU 3070.0033
GLY 3080.0040
ASN 3090.0044
GLU 3100.0041
ASP 3110.0025
LEU 3120.0024
THR 3130.0032
VAL 3140.0047
LYS 3150.0054
MET 3160.0058
SER 3170.0057
ASP 3180.0052
ARG 3190.0087
GLY 3200.0087
GLY 3210.0148
GLY 3220.0073
VAL 3230.0186
PRO 3240.0301
LEU 3250.0401
ARG 3260.0559
LYS 3270.0427
ILE 3280.0233
ASP 3290.0258
ARG 3300.0279
LEU 3310.0113
PHE 3320.0088
ASN 3330.0152
TYR 3340.0116
MET 3350.0143
TYR 3360.0229
SER 3370.0157
THR 3380.0151
ALA 3390.0154
PRO 3400.0170
ARG 3410.0135
PRO 3420.0139
ARG 3430.0192
VAL 3440.0244
GLU 3450.0165
THR 3460.0139
SER 3470.0244
ARG 3480.0160
ALA 3490.0272
VAL 3500.0215
PRO 3510.0178
LEU 3520.0148
ALA 3530.0114
GLY 3540.0061
PHE 3550.0101
GLY 3560.0067
TYR 3570.0052
GLY 3580.0030
LEU 3590.0008
PRO 3600.0015
ILE 3610.0023
SER 3620.0041
ARG 3630.0034
LEU 3640.0046
TYR 3650.0063
ALA 3660.0061
GLN 3670.0056
TYR 3680.0071
PHE 3690.0083
GLN 3700.0070
GLY 3710.0067
ASP 3720.0052
LEU 3730.0047
LYS 3740.0059
LEU 3750.0081
TYR 3760.0091
TYR 3760.0092
SER 3770.0079
LEU 3780.0067
GLU 3790.0062
GLY 3800.0131
TYR 3810.0126
GLY 3820.0078
THR 3830.0045
ASP 3840.0069
ALA 3850.0064
VAL 3860.0063
ILE 3870.0051
TYR 3880.0049
ILE 3890.0055
LYS 3900.0055
ALA 3910.0046
LEU 3920.0062
SER 3930.0097
THR 3940.0102
ASP 3950.0084
SER 3960.0092
ILE 3970.0095
GLU 3980.0090
ARG 3990.0077
LEU 4000.0072
PRO 4010.0086
VAL 4020.0091
TYR 4030.0128
ASN 4040.0178
LYS 4050.0333
ALA 4060.0329
ALA 4070.0239
TRP 4080.0270
LYS 4090.0349
HIS 4100.0293
TYR 4110.0234
ASN 4120.0314
THR 4130.0361
ASN 4140.0338
ALA 4170.0672
ASP 4180.0656
ASP 4190.0235
TRP 4200.0270
CYS 4210.0606
VAL 4220.0084
PRO 4230.0775

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: december 26th, 2025.