CNRS Nantes University US2B US2B
home |  start a new run |  job status |  references&downloads |  examples |  help  

Should you encounter any unexpected behaviour,
please let us know.
elNémo has been hacked on november 27th.
It has been moved away and runs again.
**Still some additional cleaning from time to time**
Sorry for the inconvenience.


***  PDHK1 and DCA  ***

<R2> analysis for 2604162351172680512

---  normal mode 24  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.0745
GLY 410.0215
VAL 420.0178
PRO 430.0197
GLY 440.0194
GLN 450.0155
VAL 460.0146
ASP 470.0178
PHE 480.0176
TYR 490.0129
ALA 500.0136
ARG 510.0170
PHE 520.0145
SER 530.0117
PRO 540.0087
SER 550.0103
PRO 560.0108
LEU 570.0105
SER 580.0100
MET 590.0079
LYS 600.0091
GLN 610.0113
PHE 620.0096
LEU 630.0088
ASP 640.0118
PHE 650.0128
GLY 660.0109
SER 670.0163
CYS 710.0229
GLU 720.0200
LYS 730.0220
THR 740.0219
SER 750.0150
PHE 760.0116
MET 770.0110
PHE 780.0110
LEU 790.0070
ARG 800.0041
GLN 810.0068
GLU 820.0078
LEU 830.0065
PRO 840.0080
VAL 850.0090
ARG 860.0085
LEU 870.0081
ALA 880.0100
ASN 890.0090
ILE 900.0073
MET 910.0072
LYS 920.0076
GLU 930.0041
ILE 940.0062
SER 950.0084
LEU 960.0070
LEU 970.0099
PRO 980.0148
ASP 990.0183
ASN 1000.0187
LEU 1010.0127
LEU 1020.0130
ARG 1030.0187
THR 1040.0171
PRO 1050.0184
SER 1060.0147
VAL 1070.0113
GLN 1080.0134
LEU 1090.0122
VAL 1100.0096
GLN 1110.0075
SER 1120.0080
TRP 1130.0077
TYR 1140.0068
ILE 1150.0078
GLN 1160.0070
SER 1170.0072
LEU 1180.0079
GLN 1190.0104
GLU 1200.0088
LEU 1210.0069
LEU 1220.0090
ASP 1230.0128
PHE 1240.0090
LYS 1250.0063
ASP 1260.0081
LYS 1270.0154
SER 1280.0182
ALA 1290.0186
GLU 1300.0291
ASP 1310.0313
ALA 1320.0356
LYS 1330.0357
ALA 1340.0234
ILE 1350.0198
TYR 1360.0248
ASP 1370.0203
PHE 1380.0125
THR 1390.0118
ASP 1400.0128
THR 1410.0086
VAL 1420.0047
ILE 1430.0066
ARG 1440.0063
ILE 1450.0036
ARG 1460.0029
ASN 1470.0037
ARG 1480.0018
HIS 1490.0062
ASN 1500.0072
ASP 1510.0094
VAL 1520.0086
ILE 1530.0074
PRO 1540.0102
THR 1550.0110
MET 1560.0087
ALA 1570.0076
GLN 1580.0102
GLY 1590.0109
VAL 1600.0075
ILE 1610.0085
GLU 1620.0136
TYR 1630.0137
LYS 1640.0103
GLU 1650.0158
SER 1660.0220
PHE 1670.0218
ASP 1700.0245
PRO 1710.0237
VAL 1720.0228
THR 1730.0171
SER 1740.0131
GLN 1750.0128
ASN 1760.0084
VAL 1770.0057
GLN 1780.0019
TYR 1790.0028
PHE 1800.0013
LEU 1810.0028
ASP 1820.0026
ARG 1830.0037
PHE 1840.0045
TYR 1850.0051
MET 1860.0052
SER 1870.0054
ARG 1880.0055
ILE 1890.0060
SER 1900.0065
ILE 1910.0061
ARG 1920.0061
MET 1930.0068
LEU 1940.0071
LEU 1950.0050
ASN 1960.0056
GLN 1970.0074
HIS 1980.0089
SER 1990.0066
LEU 2000.0060
LEU 2010.0093
PHE 2020.0133
GLY 2030.0119
HIS 2150.0075
ILE 2160.0066
GLY 2170.0068
SER 2180.0061
ILE 2190.0069
ASN 2200.0078
PRO 2210.0071
ASN 2220.0119
CYS 2230.0117
ASN 2240.0147
VAL 2250.0051
LEU 2260.0017
GLU 2270.0020
VAL 2280.0036
ILE 2290.0090
LYS 2300.0129
ASP 2310.0125
GLY 2320.0120
TYR 2330.0182
GLU 2340.0259
ASN 2350.0227
ALA 2360.0190
ARG 2370.0244
ARG 2380.0327
LEU 2390.0278
CYS 2400.0215
ASP 2410.0261
LEU 2420.0319
TYR 2430.0286
TYR 2440.0202
ILE 2450.0267
ASN 2460.0218
SER 2470.0201
PRO 2480.0190
GLU 2490.0267
LEU 2500.0237
GLU 2510.0243
LEU 2520.0161
GLU 2530.0105
GLU 2540.0099
LEU 2550.0297
ASN 2560.0405
ALA 2570.0606
LYS 2580.0631
SER 2590.0745
PRO 2600.0679
GLY 2610.0548
GLN 2620.0609
PRO 2630.0432
ILE 2640.0254
GLN 2650.0170
VAL 2660.0111
VAL 2670.0056
TYR 2680.0046
VAL 2690.0051
PRO 2700.0042
SER 2710.0038
HIS 2720.0038
LEU 2730.0021
TYR 2740.0051
HIS 2750.0045
HIS 2750.0045
MET 2760.0029
VAL 2770.0059
PHE 2780.0093
GLU 2790.0052
LEU 2800.0041
PHE 2810.0089
LYS 2820.0099
ASN 2830.0050
ALA 2840.0040
MET 2850.0079
ARG 2860.0091
ALA 2870.0056
THR 2880.0025
MET 2890.0072
GLU 2900.0110
HIS 2910.0089
HIS 2920.0034
ALA 2930.0082
ASN 2940.0054
ARG 2950.0077
GLY 2960.0141
VAL 2970.0185
TYR 2980.0159
PRO 2990.0199
PRO 3000.0229
ILE 3010.0181
GLN 3020.0205
VAL 3030.0174
HIS 3040.0144
VAL 3050.0093
THR 3060.0205
LEU 3070.0261
GLY 3080.0371
ASN 3090.0423
GLU 3100.0272
ASP 3110.0154
LEU 3120.0103
THR 3130.0083
VAL 3140.0075
LYS 3150.0112
MET 3160.0118
SER 3170.0142
ASP 3180.0113
ARG 3190.0137
GLY 3200.0069
GLY 3210.0129
GLY 3220.0166
VAL 3230.0232
PRO 3240.0356
LEU 3250.0397
ARG 3260.0456
LYS 3270.0317
ILE 3280.0205
ASP 3290.0189
ARG 3300.0199
LEU 3310.0103
PHE 3320.0073
ASN 3330.0070
TYR 3340.0058
MET 3350.0029
TYR 3360.0130
SER 3370.0087
THR 3380.0072
ALA 3390.0052
PRO 3400.0054
ARG 3410.0062
PRO 3420.0137
ARG 3430.0294
VAL 3440.0424
GLU 3450.0415
THR 3460.0385
SER 3470.0406
ARG 3480.0401
ALA 3490.0435
VAL 3500.0335
PRO 3510.0270
LEU 3520.0186
ALA 3530.0158
GLY 3540.0137
PHE 3550.0057
GLY 3560.0062
TYR 3570.0045
GLY 3580.0052
LEU 3590.0038
PRO 3600.0044
ILE 3610.0032
SER 3620.0030
ARG 3630.0035
LEU 3640.0035
TYR 3650.0037
ALA 3660.0031
GLN 3670.0048
TYR 3680.0054
PHE 3690.0056
GLN 3700.0053
GLY 3710.0019
ASP 3720.0019
LEU 3730.0009
LYS 3740.0035
LEU 3750.0105
TYR 3760.0167
TYR 3760.0167
SER 3770.0213
LEU 3780.0277
GLU 3790.0289
GLY 3800.0223
TYR 3810.0216
GLY 3820.0161
THR 3830.0120
ASP 3840.0128
ALA 3850.0073
VAL 3860.0069
ILE 3870.0040
TYR 3880.0040
ILE 3890.0034
LYS 3900.0028
ALA 3910.0103
LEU 3920.0108
SER 3930.0059
THR 3940.0066
ASP 3950.0042
SER 3960.0063
ILE 3970.0084
GLU 3980.0082
ARG 3990.0073
LEU 4000.0072
PRO 4010.0057
VAL 4020.0073
TYR 4030.0076
ASN 4040.0078
LYS 4050.0051
ALA 4060.0094
ALA 4070.0049
TRP 4080.0035
LYS 4090.0102
HIS 4100.0110
TYR 4110.0097
ASN 4120.0144
THR 4130.0198
ASN 4140.0266
ALA 4170.0071
ASP 4180.0068
ASP 4190.0092
TRP 4200.0070
CYS 4210.0076
VAL 4220.0048
PRO 4230.0059

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: december 26th, 2025.