CNRS Nantes University US2B US2B
home |  start a new run |  job status |  references&downloads |  examples |  help  

Should you encounter any unexpected behaviour,
please let us know.
elNémo has been hacked on november 27th.
It has been moved away and runs again.
**Still some additional cleaning from time to time**
Sorry for the inconvenience.


***  PDHK1 and DCA  ***

<R2> analysis for 2604162351172680512

---  normal mode 25  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.0876
GLY 410.0364
VAL 420.0313
PRO 430.0311
GLY 440.0267
GLN 450.0205
VAL 460.0208
ASP 470.0207
PHE 480.0188
TYR 490.0173
ALA 500.0194
ARG 510.0200
PHE 520.0173
SER 530.0173
PRO 540.0154
SER 550.0122
PRO 560.0122
LEU 570.0078
SER 580.0067
MET 590.0048
LYS 600.0044
GLN 610.0044
PHE 620.0047
LEU 630.0060
ASP 640.0069
PHE 650.0067
GLY 660.0095
SER 670.0161
CYS 710.0140
GLU 720.0109
LYS 730.0150
THR 740.0122
SER 750.0067
PHE 760.0103
MET 770.0137
PHE 780.0106
LEU 790.0105
ARG 800.0148
GLN 810.0141
GLU 820.0136
LEU 830.0141
PRO 840.0161
VAL 850.0153
ARG 860.0151
LEU 870.0160
ALA 880.0167
ASN 890.0168
ILE 900.0139
MET 910.0144
LYS 920.0171
GLU 930.0088
ILE 940.0049
SER 950.0118
LEU 960.0097
LEU 970.0145
PRO 980.0278
ASP 990.0383
ASN 1000.0390
LEU 1010.0222
LEU 1020.0202
ARG 1030.0298
THR 1040.0192
PRO 1050.0114
SER 1060.0064
VAL 1070.0064
GLN 1080.0134
LEU 1090.0128
VAL 1100.0124
GLN 1110.0126
SER 1120.0149
TRP 1130.0164
TYR 1140.0158
ILE 1150.0164
GLN 1160.0171
SER 1170.0169
LEU 1180.0175
GLN 1190.0184
GLU 1200.0166
LEU 1210.0163
LEU 1220.0198
ASP 1230.0205
PHE 1240.0191
LYS 1250.0228
ASP 1260.0258
LYS 1270.0267
SER 1280.0281
ALA 1290.0260
GLU 1300.0301
ASP 1310.0278
ALA 1320.0233
LYS 1330.0196
ALA 1340.0188
ILE 1350.0135
TYR 1360.0101
ASP 1370.0109
PHE 1380.0105
THR 1390.0060
ASP 1400.0075
THR 1410.0119
VAL 1420.0113
ILE 1430.0115
ARG 1440.0147
ILE 1450.0168
ARG 1460.0162
ASN 1470.0177
ARG 1480.0198
HIS 1490.0190
ASN 1500.0190
ASP 1510.0182
VAL 1520.0154
ILE 1530.0157
PRO 1540.0169
THR 1550.0126
MET 1560.0101
ALA 1570.0150
GLN 1580.0149
GLY 1590.0110
VAL 1600.0173
ILE 1610.0244
GLU 1620.0213
TYR 1630.0291
LYS 1640.0360
GLU 1650.0444
SER 1660.0493
PHE 1670.0553
ASP 1700.0876
PRO 1710.0800
VAL 1720.0568
THR 1730.0396
SER 1740.0373
GLN 1750.0297
ASN 1760.0118
VAL 1770.0147
GLN 1780.0167
TYR 1790.0105
PHE 1800.0070
LEU 1810.0104
ASP 1820.0145
ARG 1830.0122
PHE 1840.0102
TYR 1850.0126
MET 1860.0123
SER 1870.0127
ARG 1880.0126
ILE 1890.0111
SER 1900.0130
ILE 1910.0131
ARG 1920.0135
MET 1930.0098
LEU 1940.0098
LEU 1950.0109
ASN 1960.0103
GLN 1970.0067
HIS 1980.0058
SER 1990.0081
LEU 2000.0109
LEU 2010.0096
PHE 2020.0090
GLY 2030.0102
HIS 2150.0130
ILE 2160.0106
GLY 2170.0103
SER 2180.0108
ILE 2190.0080
ASN 2200.0089
PRO 2210.0078
ASN 2220.0085
CYS 2230.0079
ASN 2240.0083
VAL 2250.0079
LEU 2260.0080
GLU 2270.0083
VAL 2280.0081
ILE 2290.0081
LYS 2300.0083
ASP 2310.0086
GLY 2320.0085
TYR 2330.0088
GLU 2340.0099
ASN 2350.0099
ALA 2360.0095
ARG 2370.0108
ARG 2380.0126
LEU 2390.0108
CYS 2400.0113
ASP 2410.0137
LEU 2420.0145
TYR 2430.0147
TYR 2440.0153
ILE 2450.0184
ASN 2460.0154
SER 2470.0122
PRO 2480.0116
GLU 2490.0108
LEU 2500.0103
GLU 2510.0091
LEU 2520.0089
GLU 2530.0079
GLU 2540.0086
LEU 2550.0095
ASN 2560.0093
ALA 2570.0097
LYS 2580.0085
SER 2590.0107
PRO 2600.0121
GLY 2610.0125
GLN 2620.0109
PRO 2630.0085
ILE 2640.0082
GLN 2650.0073
VAL 2660.0060
VAL 2670.0044
TYR 2680.0058
VAL 2690.0070
PRO 2700.0081
SER 2710.0072
HIS 2720.0071
LEU 2730.0058
TYR 2740.0067
HIS 2750.0065
HIS 2750.0065
MET 2760.0064
VAL 2770.0066
PHE 2780.0074
GLU 2790.0071
LEU 2800.0069
PHE 2810.0071
LYS 2820.0077
ASN 2830.0074
ALA 2840.0074
MET 2850.0078
ARG 2860.0086
ALA 2870.0085
THR 2880.0086
MET 2890.0104
GLU 2900.0106
HIS 2910.0090
HIS 2920.0121
ALA 2930.0161
ASN 2940.0211
ARG 2950.0237
GLY 2960.0242
VAL 2970.0216
TYR 2980.0168
PRO 2990.0144
PRO 3000.0128
ILE 3010.0093
GLN 3020.0104
VAL 3030.0078
HIS 3040.0077
VAL 3050.0075
THR 3060.0078
LEU 3070.0072
GLY 3080.0063
ASN 3090.0037
GLU 3100.0030
ASP 3110.0040
LEU 3120.0052
THR 3130.0056
VAL 3140.0063
LYS 3150.0072
MET 3160.0071
SER 3170.0099
ASP 3180.0099
ARG 3190.0143
GLY 3200.0113
GLY 3210.0210
GLY 3220.0202
VAL 3230.0251
PRO 3240.0297
LEU 3250.0322
ARG 3260.0439
LYS 3270.0342
ILE 3280.0200
ASP 3290.0174
ARG 3300.0184
LEU 3310.0135
PHE 3320.0128
ASN 3330.0169
TYR 3340.0159
MET 3350.0250
TYR 3360.0289
SER 3370.0246
THR 3380.0257
ALA 3390.0279
PRO 3400.0321
ARG 3410.0317
PRO 3420.0377
ARG 3430.0243
VAL 3440.0184
GLU 3450.0096
THR 3460.0068
SER 3470.0088
ARG 3480.0036
ALA 3490.0140
VAL 3500.0060
PRO 3510.0079
LEU 3520.0077
ALA 3530.0080
GLY 3540.0202
PHE 3550.0267
GLY 3560.0230
TYR 3570.0146
GLY 3580.0155
LEU 3590.0120
PRO 3600.0115
ILE 3610.0112
SER 3620.0100
ARG 3630.0100
LEU 3640.0107
TYR 3650.0083
ALA 3660.0081
GLN 3670.0096
TYR 3680.0092
PHE 3690.0075
GLN 3700.0080
GLY 3710.0067
ASP 3720.0074
LEU 3730.0093
LYS 3740.0083
LEU 3750.0112
TYR 3760.0120
TYR 3760.0120
SER 3770.0158
LEU 3780.0179
GLU 3790.0221
GLY 3800.0247
TYR 3810.0195
GLY 3820.0166
THR 3830.0128
ASP 3840.0108
ALA 3850.0083
VAL 3860.0078
ILE 3870.0063
TYR 3880.0063
ILE 3890.0055
LYS 3900.0041
ALA 3910.0042
LEU 3920.0031
SER 3930.0043
THR 3940.0035
ASP 3950.0039
SER 3960.0056
ILE 3970.0082
GLU 3980.0102
ARG 3990.0128
LEU 4000.0133
PRO 4010.0188
VAL 4020.0202
TYR 4030.0225
ASN 4040.0282
LYS 4050.0415
ALA 4060.0371
ALA 4070.0234
TRP 4080.0238
LYS 4090.0266
HIS 4100.0141
TYR 4110.0096
ASN 4120.0201
THR 4130.0150
ASN 4140.0081
ALA 4170.0023
ASP 4180.0022
ASP 4190.0015
TRP 4200.0005
CYS 4210.0006
VAL 4220.0002
PRO 4230.0013

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: december 26th, 2025.