CNRS Nantes University US2B US2B
home |  start a new run |  job status |  references&downloads |  examples |  help  

Should you encounter any unexpected behaviour,
please let us know.
elNémo has been hacked on november 27th.
It has been moved away and runs again.
**Still some additional cleaning from time to time**
Sorry for the inconvenience.


***  PDHK1 and DCA  ***

<R2> analysis for 2604162351172680512

---  normal mode 26  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.0631
GLY 410.0248
VAL 420.0213
PRO 430.0240
GLY 440.0224
GLN 450.0159
VAL 460.0163
ASP 470.0175
PHE 480.0161
TYR 490.0136
ALA 500.0143
ARG 510.0142
PHE 520.0120
SER 530.0115
PRO 540.0115
SER 550.0112
PRO 560.0118
LEU 570.0148
SER 580.0157
MET 590.0137
LYS 600.0196
GLN 610.0197
PHE 620.0180
LEU 630.0206
ASP 640.0240
PHE 650.0197
GLY 660.0214
SER 670.0305
CYS 710.0052
GLU 720.0051
LYS 730.0136
THR 740.0145
SER 750.0085
PHE 760.0079
MET 770.0128
PHE 780.0130
LEU 790.0104
ARG 800.0085
GLN 810.0110
GLU 820.0127
LEU 830.0124
PRO 840.0125
VAL 850.0131
ARG 860.0135
LEU 870.0139
ALA 880.0142
ASN 890.0130
ILE 900.0126
MET 910.0133
LYS 920.0131
GLU 930.0095
ILE 940.0092
SER 950.0076
LEU 960.0057
LEU 970.0037
PRO 980.0008
ASP 990.0038
ASN 1000.0034
LEU 1010.0025
LEU 1020.0034
ARG 1030.0020
THR 1040.0036
PRO 1050.0060
SER 1060.0079
VAL 1070.0073
GLN 1080.0084
LEU 1090.0113
VAL 1100.0113
GLN 1110.0121
SER 1120.0127
TRP 1130.0133
TYR 1140.0132
ILE 1150.0140
GLN 1160.0125
SER 1170.0118
LEU 1180.0117
GLN 1190.0091
GLU 1200.0063
LEU 1210.0061
LEU 1220.0069
ASP 1230.0066
PHE 1240.0110
LYS 1250.0145
ASP 1260.0258
LYS 1270.0299
SER 1280.0372
ALA 1290.0335
GLU 1300.0431
ASP 1310.0420
ALA 1320.0384
LYS 1330.0394
ALA 1340.0293
ILE 1350.0200
TYR 1360.0244
ASP 1370.0209
PHE 1380.0105
THR 1390.0097
ASP 1400.0163
THR 1410.0105
VAL 1420.0101
ILE 1430.0128
ARG 1440.0135
ILE 1450.0122
ARG 1460.0137
ASN 1470.0119
ARG 1480.0104
HIS 1490.0101
ASN 1500.0096
ASP 1510.0102
VAL 1520.0101
ILE 1530.0090
PRO 1540.0088
THR 1550.0088
MET 1560.0076
ALA 1570.0074
GLN 1580.0085
GLY 1590.0065
VAL 1600.0067
ILE 1610.0097
GLU 1620.0087
TYR 1630.0073
LYS 1640.0095
GLU 1650.0123
SER 1660.0116
PHE 1670.0110
ASP 1700.0175
PRO 1710.0166
VAL 1720.0111
THR 1730.0056
SER 1740.0069
GLN 1750.0048
ASN 1760.0022
VAL 1770.0050
GLN 1780.0070
TYR 1790.0056
PHE 1800.0062
LEU 1810.0077
ASP 1820.0077
ARG 1830.0081
PHE 1840.0079
TYR 1850.0085
MET 1860.0066
SER 1870.0101
ARG 1880.0100
ILE 1890.0077
SER 1900.0118
ILE 1910.0131
ARG 1920.0122
MET 1930.0121
LEU 1940.0137
LEU 1950.0126
ASN 1960.0141
GLN 1970.0147
HIS 1980.0102
SER 1990.0121
LEU 2000.0152
LEU 2010.0139
PHE 2020.0105
GLY 2030.0143
HIS 2150.0215
ILE 2160.0219
GLY 2170.0193
SER 2180.0147
ILE 2190.0136
ASN 2200.0131
PRO 2210.0153
ASN 2220.0107
CYS 2230.0027
ASN 2240.0026
VAL 2250.0074
LEU 2260.0087
GLU 2270.0082
VAL 2280.0099
ILE 2290.0127
LYS 2300.0124
ASP 2310.0152
GLY 2320.0168
TYR 2330.0166
GLU 2340.0202
ASN 2350.0237
ALA 2360.0230
ARG 2370.0253
ARG 2380.0320
LEU 2390.0337
CYS 2400.0299
ASP 2410.0339
LEU 2420.0395
TYR 2430.0375
TYR 2440.0329
ILE 2450.0403
ASN 2460.0337
SER 2470.0254
PRO 2480.0180
GLU 2490.0167
LEU 2500.0115
GLU 2510.0079
LEU 2520.0093
GLU 2530.0113
GLU 2540.0103
LEU 2550.0130
ASN 2560.0113
ALA 2570.0180
LYS 2580.0175
SER 2590.0150
PRO 2600.0143
GLY 2610.0096
GLN 2620.0064
PRO 2630.0027
ILE 2640.0055
GLN 2650.0043
VAL 2660.0066
VAL 2670.0102
TYR 2680.0047
VAL 2690.0026
PRO 2700.0041
SER 2710.0072
HIS 2720.0069
LEU 2730.0127
TYR 2740.0131
HIS 2750.0140
HIS 2750.0140
MET 2760.0146
VAL 2770.0154
PHE 2780.0176
GLU 2790.0173
LEU 2800.0169
PHE 2810.0169
LYS 2820.0200
ASN 2830.0188
ALA 2840.0142
MET 2850.0176
ARG 2860.0219
ALA 2870.0173
THR 2880.0132
MET 2890.0246
GLU 2900.0252
HIS 2910.0153
HIS 2920.0227
ALA 2930.0411
ASN 2940.0515
ARG 2950.0508
GLY 2960.0507
VAL 2970.0362
TYR 2980.0229
PRO 2990.0144
PRO 3000.0106
ILE 3010.0088
GLN 3020.0057
VAL 3030.0125
HIS 3040.0121
VAL 3050.0131
THR 3060.0131
LEU 3070.0124
GLY 3080.0179
ASN 3090.0244
GLU 3100.0213
ASP 3110.0152
LEU 3120.0116
THR 3130.0141
VAL 3140.0149
LYS 3150.0140
MET 3160.0138
SER 3170.0098
ASP 3180.0083
ARG 3190.0053
GLY 3200.0057
GLY 3210.0189
GLY 3220.0176
VAL 3230.0250
PRO 3240.0349
LEU 3250.0421
ARG 3260.0631
LYS 3270.0438
ILE 3280.0213
ASP 3290.0247
ARG 3300.0191
LEU 3310.0077
PHE 3320.0126
ASN 3330.0099
TYR 3340.0093
MET 3350.0088
TYR 3360.0084
SER 3370.0078
THR 3380.0090
ALA 3390.0128
PRO 3400.0149
ARG 3410.0205
PRO 3420.0245
ARG 3430.0258
VAL 3440.0296
GLU 3450.0443
THR 3460.0365
SER 3470.0394
ARG 3480.0260
ALA 3490.0344
VAL 3500.0348
PRO 3510.0298
LEU 3520.0285
ALA 3530.0244
GLY 3540.0189
PHE 3550.0128
GLY 3560.0110
TYR 3570.0092
GLY 3580.0119
LEU 3590.0131
PRO 3600.0114
ILE 3610.0103
SER 3620.0134
ARG 3630.0122
LEU 3640.0099
TYR 3650.0088
ALA 3660.0090
GLN 3670.0061
TYR 3680.0024
PHE 3690.0054
GLN 3700.0093
GLY 3710.0094
ASP 3720.0119
LEU 3730.0148
LYS 3740.0152
LEU 3750.0143
TYR 3760.0129
TYR 3760.0129
SER 3770.0122
LEU 3780.0142
GLU 3790.0224
GLY 3800.0278
TYR 3810.0186
GLY 3820.0130
THR 3830.0117
ASP 3840.0130
ALA 3850.0158
VAL 3860.0163
ILE 3870.0148
TYR 3880.0139
ILE 3890.0096
LYS 3900.0104
ALA 3910.0107
LEU 3920.0154
SER 3930.0142
THR 3940.0198
ASP 3950.0178
SER 3960.0113
ILE 3970.0116
GLU 3980.0091
ARG 3990.0060
LEU 4000.0085
PRO 4010.0111
VAL 4020.0112
TYR 4030.0127
ASN 4040.0127
LYS 4050.0138
ALA 4060.0133
ALA 4070.0105
TRP 4080.0092
LYS 4090.0107
HIS 4100.0080
TYR 4110.0056
ASN 4120.0083
THR 4130.0106
ASN 4140.0101
ALA 4170.0028
ASP 4180.0015
ASP 4190.0026
TRP 4200.0012
CYS 4210.0008
VAL 4220.0007
PRO 4230.0058

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: december 26th, 2025.