CNRS Nantes University US2B US2B
home |  start a new run |  job status |  references&downloads |  examples |  help  

Should you encounter any unexpected behaviour,
please let us know.
elNémo has been hacked on november 27th.
It has been moved away and runs again.
**Still some additional cleaning from time to time**
Sorry for the inconvenience.


***  PDHK1 and DCA  ***

<R2> analysis for 2604162351172680512

---  normal mode 29  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.0866
GLY 410.0141
VAL 420.0120
PRO 430.0124
GLY 440.0127
GLN 450.0104
VAL 460.0094
ASP 470.0108
PHE 480.0105
TYR 490.0084
ALA 500.0082
ARG 510.0094
PHE 520.0083
SER 530.0048
PRO 540.0039
SER 550.0045
PRO 560.0069
LEU 570.0117
SER 580.0137
MET 590.0161
LYS 600.0164
GLN 610.0136
PHE 620.0123
LEU 630.0147
ASP 640.0131
PHE 650.0080
GLY 660.0080
SER 670.0097
CYS 710.0058
GLU 720.0065
LYS 730.0098
THR 740.0098
SER 750.0071
PHE 760.0086
MET 770.0093
PHE 780.0085
LEU 790.0078
ARG 800.0088
GLN 810.0075
GLU 820.0066
LEU 830.0065
PRO 840.0074
VAL 850.0064
ARG 860.0055
LEU 870.0063
ALA 880.0063
ASN 890.0053
ILE 900.0055
MET 910.0069
LYS 920.0084
GLU 930.0081
ILE 940.0082
SER 950.0098
LEU 960.0090
LEU 970.0093
PRO 980.0127
ASP 990.0188
ASN 1000.0201
LEU 1010.0138
LEU 1020.0155
ARG 1030.0214
THR 1040.0185
PRO 1050.0192
SER 1060.0166
VAL 1070.0143
GLN 1080.0161
LEU 1090.0140
VAL 1100.0122
GLN 1110.0109
SER 1120.0105
TRP 1130.0099
TYR 1140.0082
ILE 1150.0078
GLN 1160.0072
SER 1170.0082
LEU 1180.0080
GLN 1190.0077
GLU 1200.0078
LEU 1210.0084
LEU 1220.0091
ASP 1230.0085
PHE 1240.0099
LYS 1250.0117
ASP 1260.0123
LYS 1270.0129
SER 1280.0151
ALA 1290.0157
GLU 1300.0177
ASP 1310.0158
ALA 1320.0146
LYS 1330.0122
ALA 1340.0114
ILE 1350.0102
TYR 1360.0090
ASP 1370.0075
PHE 1380.0078
THR 1390.0067
ASP 1400.0061
THR 1410.0068
VAL 1420.0067
ILE 1430.0060
ARG 1440.0061
ILE 1450.0069
ARG 1460.0062
ASN 1470.0068
ARG 1480.0064
HIS 1490.0062
ASN 1500.0067
ASP 1510.0084
VAL 1520.0081
ILE 1530.0093
PRO 1540.0107
THR 1550.0119
MET 1560.0099
ALA 1570.0092
GLN 1580.0118
GLY 1590.0127
VAL 1600.0085
ILE 1610.0100
GLU 1620.0152
TYR 1630.0146
LYS 1640.0115
GLU 1650.0176
SER 1660.0269
PHE 1670.0250
ASP 1700.0316
PRO 1710.0273
VAL 1720.0170
THR 1730.0133
SER 1740.0123
GLN 1750.0098
ASN 1760.0047
VAL 1770.0043
GLN 1780.0042
TYR 1790.0063
PHE 1800.0047
LEU 1810.0047
ASP 1820.0053
ARG 1830.0063
PHE 1840.0046
TYR 1850.0054
MET 1860.0038
SER 1870.0025
ARG 1880.0022
ILE 1890.0032
SER 1900.0036
ILE 1910.0029
ARG 1920.0058
MET 1930.0067
LEU 1940.0061
LEU 1950.0063
ASN 1960.0081
GLN 1970.0092
HIS 1980.0063
SER 1990.0049
LEU 2000.0057
LEU 2010.0050
PHE 2020.0032
GLY 2030.0032
HIS 2150.0169
ILE 2160.0154
GLY 2170.0147
SER 2180.0150
ILE 2190.0189
ASN 2200.0187
PRO 2210.0221
ASN 2220.0209
CYS 2230.0205
ASN 2240.0182
VAL 2250.0120
LEU 2260.0067
GLU 2270.0070
VAL 2280.0098
ILE 2290.0094
LYS 2300.0095
ASP 2310.0110
GLY 2320.0128
TYR 2330.0143
GLU 2340.0142
ASN 2350.0131
ALA 2360.0128
ARG 2370.0121
ARG 2380.0119
LEU 2390.0089
CYS 2400.0065
ASP 2410.0060
LEU 2420.0069
TYR 2430.0063
TYR 2440.0070
ILE 2450.0067
ASN 2460.0096
SER 2470.0111
PRO 2480.0157
GLU 2490.0146
LEU 2500.0149
GLU 2510.0078
LEU 2520.0077
GLU 2530.0241
GLU 2540.0218
LEU 2550.0391
ASN 2560.0410
ALA 2570.0439
LYS 2580.0481
SER 2590.0802
PRO 2600.0830
GLY 2610.0866
GLN 2620.0775
PRO 2630.0395
ILE 2640.0280
GLN 2650.0239
VAL 2660.0234
VAL 2670.0195
TYR 2680.0176
VAL 2690.0156
PRO 2700.0137
SER 2710.0131
HIS 2720.0119
LEU 2730.0106
TYR 2740.0109
HIS 2750.0130
HIS 2750.0130
MET 2760.0118
VAL 2770.0118
PHE 2780.0126
GLU 2790.0141
LEU 2800.0138
PHE 2810.0129
LYS 2820.0117
ASN 2830.0120
ALA 2840.0128
MET 2850.0100
ARG 2860.0042
ALA 2870.0068
THR 2880.0129
MET 2890.0124
GLU 2900.0156
HIS 2910.0200
HIS 2920.0306
ALA 2930.0381
ASN 2940.0606
ARG 2950.0608
GLY 2960.0472
VAL 2970.0419
TYR 2980.0300
PRO 2990.0227
PRO 3000.0207
ILE 3010.0152
GLN 3020.0174
VAL 3030.0151
HIS 3040.0121
VAL 3050.0082
THR 3060.0129
LEU 3070.0187
GLY 3080.0176
ASN 3090.0254
GLU 3100.0243
ASP 3110.0137
LEU 3120.0108
THR 3130.0047
VAL 3140.0077
LYS 3150.0145
MET 3160.0153
SER 3170.0193
ASP 3180.0174
ARG 3190.0233
GLY 3200.0138
GLY 3210.0143
GLY 3220.0158
VAL 3230.0209
PRO 3240.0277
LEU 3250.0328
ARG 3260.0402
LYS 3270.0297
ILE 3280.0208
ASP 3290.0183
ARG 3300.0220
LEU 3310.0165
PHE 3320.0144
ASN 3330.0090
TYR 3340.0096
MET 3350.0054
TYR 3360.0146
SER 3370.0119
THR 3380.0080
ALA 3390.0045
PRO 3400.0061
ARG 3410.0101
PRO 3420.0103
ARG 3430.0123
VAL 3440.0052
GLU 3450.0052
THR 3460.0044
SER 3470.0074
ARG 3480.0169
ALA 3490.0185
VAL 3500.0154
PRO 3510.0080
LEU 3520.0056
ALA 3530.0051
GLY 3540.0063
PHE 3550.0071
GLY 3560.0096
TYR 3570.0112
GLY 3580.0151
LEU 3590.0146
PRO 3600.0136
ILE 3610.0118
SER 3620.0128
ARG 3630.0106
LEU 3640.0107
TYR 3650.0120
ALA 3660.0111
GLN 3670.0092
TYR 3680.0097
PHE 3690.0136
GLN 3700.0149
GLY 3710.0138
ASP 3720.0135
LEU 3730.0151
LYS 3740.0173
LEU 3750.0215
TYR 3760.0242
TYR 3760.0240
SER 3770.0250
LEU 3780.0266
GLU 3790.0212
GLY 3800.0179
TYR 3810.0240
GLY 3820.0216
THR 3830.0204
ASP 3840.0216
ALA 3850.0180
VAL 3860.0146
ILE 3870.0115
TYR 3880.0115
ILE 3890.0133
LYS 3900.0174
ALA 3910.0218
LEU 3920.0256
SER 3930.0202
THR 3940.0218
ASP 3950.0225
SER 3960.0184
ILE 3970.0151
GLU 3980.0119
ARG 3990.0087
LEU 4000.0059
PRO 4010.0040
VAL 4020.0058
TYR 4030.0095
ASN 4040.0129
LYS 4050.0256
ALA 4060.0258
ALA 4070.0174
TRP 4080.0186
LYS 4090.0247
HIS 4100.0191
TYR 4110.0142
ASN 4120.0207
THR 4130.0248
ASN 4140.0219
ALA 4170.0053
ASP 4180.0040
ASP 4190.0025
TRP 4200.0045
CYS 4210.0056
VAL 4220.0042
PRO 4230.0129

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: december 26th, 2025.