CNRS Nantes University US2B US2B
home |  start a new run |  job status |  references&downloads |  examples |  help  

Should you encounter any unexpected behaviour,
please let us know.
elNémo has been hacked on november 27th.
It has been moved away and runs again.
**Still some additional cleaning from time to time**
Sorry for the inconvenience.


***  PDHK1 and DCA  ***

<R2> analysis for 2604162351172680512

---  normal mode 33  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.0762
GLY 410.0457
VAL 420.0322
PRO 430.0317
GLY 440.0362
GLN 450.0273
VAL 460.0206
ASP 470.0260
PHE 480.0294
TYR 490.0200
ALA 500.0182
ARG 510.0255
PHE 520.0251
SER 530.0164
PRO 540.0126
SER 550.0079
PRO 560.0062
LEU 570.0037
SER 580.0038
MET 590.0075
LYS 600.0104
GLN 610.0122
PHE 620.0139
LEU 630.0172
ASP 640.0204
PHE 650.0232
GLY 660.0260
SER 670.0436
CYS 710.0223
GLU 720.0230
LYS 730.0259
THR 740.0289
SER 750.0236
PHE 760.0212
MET 770.0185
PHE 780.0193
LEU 790.0183
ARG 800.0156
GLN 810.0147
GLU 820.0138
LEU 830.0141
PRO 840.0128
VAL 850.0112
ARG 860.0111
LEU 870.0095
ALA 880.0110
ASN 890.0102
ILE 900.0068
MET 910.0066
LYS 920.0076
GLU 930.0068
ILE 940.0057
SER 950.0080
LEU 960.0073
LEU 970.0064
PRO 980.0069
ASP 990.0089
ASN 1000.0127
LEU 1010.0110
LEU 1020.0097
ARG 1030.0116
THR 1040.0127
PRO 1050.0122
SER 1060.0121
VAL 1070.0094
GLN 1080.0077
LEU 1090.0058
VAL 1100.0058
GLN 1110.0041
SER 1120.0026
TRP 1130.0024
TYR 1140.0038
ILE 1150.0076
GLN 1160.0079
SER 1170.0074
LEU 1180.0104
GLN 1190.0121
GLU 1200.0092
LEU 1210.0113
LEU 1220.0127
ASP 1230.0069
PHE 1240.0118
LYS 1250.0158
ASP 1260.0144
LYS 1270.0172
SER 1280.0250
ALA 1290.0275
GLU 1300.0348
ASP 1310.0304
ALA 1320.0289
LYS 1330.0222
ALA 1340.0189
ILE 1350.0204
TYR 1360.0175
ASP 1370.0124
PHE 1380.0150
THR 1390.0173
ASP 1400.0134
THR 1410.0117
VAL 1420.0147
ILE 1430.0138
ARG 1440.0118
ILE 1450.0107
ARG 1460.0131
ASN 1470.0099
ARG 1480.0098
HIS 1490.0032
ASN 1500.0014
ASP 1510.0074
VAL 1520.0088
ILE 1530.0137
PRO 1540.0145
THR 1550.0139
MET 1560.0129
ALA 1570.0149
GLN 1580.0182
GLY 1590.0164
VAL 1600.0157
ILE 1610.0200
GLU 1620.0195
TYR 1630.0177
LYS 1640.0188
GLU 1650.0246
SER 1660.0268
PHE 1670.0213
ASP 1700.0252
PRO 1710.0194
VAL 1720.0166
THR 1730.0158
SER 1740.0130
GLN 1750.0088
ASN 1760.0110
VAL 1770.0119
GLN 1780.0119
TYR 1790.0116
PHE 1800.0096
LEU 1810.0114
ASP 1820.0126
ARG 1830.0110
PHE 1840.0090
TYR 1850.0109
MET 1860.0101
SER 1870.0099
ARG 1880.0079
ILE 1890.0075
SER 1900.0077
ILE 1910.0082
ARG 1920.0088
MET 1930.0092
LEU 1940.0121
LEU 1950.0138
ASN 1960.0185
GLN 1970.0182
HIS 1980.0195
SER 1990.0193
LEU 2000.0246
LEU 2010.0243
PHE 2020.0219
GLY 2030.0220
HIS 2150.0241
ILE 2160.0235
GLY 2170.0224
SER 2180.0185
ILE 2190.0144
ASN 2200.0124
PRO 2210.0117
ASN 2220.0090
CYS 2230.0089
ASN 2240.0112
VAL 2250.0115
LEU 2260.0133
GLU 2270.0115
VAL 2280.0114
ILE 2290.0098
LYS 2300.0083
ASP 2310.0073
GLY 2320.0062
TYR 2330.0044
GLU 2340.0062
ASN 2350.0042
ALA 2360.0043
ARG 2370.0089
ARG 2380.0129
LEU 2390.0138
CYS 2400.0103
ASP 2410.0143
LEU 2420.0190
TYR 2430.0183
TYR 2440.0107
ILE 2450.0121
ASN 2460.0079
SER 2470.0054
PRO 2480.0054
GLU 2490.0050
LEU 2500.0056
GLU 2510.0076
LEU 2520.0107
GLU 2530.0249
GLU 2540.0225
LEU 2550.0291
ASN 2560.0245
ALA 2570.0220
LYS 2580.0248
SER 2590.0440
PRO 2600.0493
GLY 2610.0648
GLN 2620.0545
PRO 2630.0285
ILE 2640.0149
GLN 2650.0088
VAL 2660.0062
VAL 2670.0076
TYR 2680.0084
VAL 2690.0107
PRO 2700.0119
SER 2710.0100
HIS 2720.0103
LEU 2730.0120
TYR 2740.0101
HIS 2750.0091
HIS 2750.0091
MET 2760.0089
VAL 2770.0083
PHE 2780.0058
GLU 2790.0062
LEU 2800.0059
PHE 2810.0037
LYS 2820.0021
ASN 2830.0033
ALA 2840.0029
MET 2850.0027
ARG 2860.0020
ALA 2870.0055
THR 2880.0043
MET 2890.0034
GLU 2900.0039
HIS 2910.0092
HIS 2920.0069
ALA 2930.0091
ASN 2940.0138
ARG 2950.0105
GLY 2960.0097
VAL 2970.0067
TYR 2980.0041
PRO 2990.0027
PRO 3000.0037
ILE 3010.0049
GLN 3020.0073
VAL 3030.0143
HIS 3040.0164
VAL 3050.0181
THR 3060.0171
LEU 3070.0143
GLY 3080.0112
ASN 3090.0143
GLU 3100.0080
ASP 3110.0090
LEU 3120.0116
THR 3130.0138
VAL 3140.0144
LYS 3150.0127
MET 3160.0097
SER 3170.0055
ASP 3180.0040
ARG 3190.0065
GLY 3200.0085
GLY 3210.0218
GLY 3220.0232
VAL 3230.0293
PRO 3240.0320
LEU 3250.0197
ARG 3260.0287
LYS 3270.0271
ILE 3280.0183
ASP 3290.0162
ARG 3300.0219
LEU 3310.0155
PHE 3320.0156
ASN 3330.0133
TYR 3340.0165
MET 3350.0184
TYR 3360.0200
SER 3370.0185
THR 3380.0196
ALA 3390.0208
PRO 3400.0245
ARG 3410.0239
PRO 3420.0245
ARG 3430.0152
VAL 3440.0228
GLU 3450.0124
THR 3460.0363
SER 3470.0221
ARG 3480.0762
ALA 3490.0551
VAL 3500.0342
PRO 3510.0126
LEU 3520.0063
ALA 3530.0050
GLY 3540.0147
PHE 3550.0196
GLY 3560.0183
TYR 3570.0140
GLY 3580.0125
LEU 3590.0112
PRO 3600.0121
ILE 3610.0124
SER 3620.0102
ARG 3630.0108
LEU 3640.0118
TYR 3650.0105
ALA 3660.0107
GLN 3670.0112
TYR 3680.0087
PHE 3690.0073
GLN 3700.0097
GLY 3710.0115
ASP 3720.0129
LEU 3730.0119
LYS 3740.0107
LEU 3750.0064
TYR 3760.0052
TYR 3760.0053
SER 3770.0166
LEU 3780.0265
GLU 3790.0371
GLY 3800.0353
TYR 3810.0249
GLY 3820.0159
THR 3830.0074
ASP 3840.0055
ALA 3850.0087
VAL 3860.0116
ILE 3870.0125
TYR 3880.0128
ILE 3890.0105
LYS 3900.0085
ALA 3910.0078
LEU 3920.0064
SER 3930.0062
THR 3940.0089
ASP 3950.0078
SER 3960.0057
ILE 3970.0050
GLU 3980.0060
ARG 3990.0082
LEU 4000.0107
PRO 4010.0124
VAL 4020.0105
TYR 4030.0113
ASN 4040.0136
LYS 4050.0127
ALA 4060.0156
ALA 4070.0122
TRP 4080.0106
LYS 4090.0141
HIS 4100.0161
TYR 4110.0133
ASN 4120.0178
THR 4130.0247
ASN 4140.0335
ALA 4170.0014
ASP 4180.0026
ASP 4190.0024
TRP 4200.0031
CYS 4210.0035
VAL 4220.0024
PRO 4230.0017

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: december 26th, 2025.