CNRS Nantes University US2B US2B
home |  start a new run |  job status |  references&downloads |  examples |  help  

Should you encounter any unexpected behaviour,
please let us know.
elNémo has been hacked on november 27th.
It has been moved away and runs again.
**Still some additional cleaning from time to time**
Sorry for the inconvenience.


***  PDHK1 and DCA  ***

<R2> analysis for 2604162351172680512

---  normal mode 34  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.0887
GLY 410.0313
VAL 420.0241
PRO 430.0224
GLY 440.0188
GLN 450.0132
VAL 460.0114
ASP 470.0091
PHE 480.0100
TYR 490.0089
ALA 500.0085
ARG 510.0090
PHE 520.0096
SER 530.0087
PRO 540.0086
SER 550.0092
PRO 560.0085
LEU 570.0097
SER 580.0104
MET 590.0103
LYS 600.0132
GLN 610.0121
PHE 620.0107
LEU 630.0112
ASP 640.0122
PHE 650.0094
GLY 660.0098
SER 670.0119
CYS 710.0051
GLU 720.0042
LYS 730.0086
THR 740.0072
SER 750.0057
PHE 760.0076
MET 770.0098
PHE 780.0101
LEU 790.0098
ARG 800.0121
GLN 810.0115
GLU 820.0107
LEU 830.0105
PRO 840.0110
VAL 850.0093
ARG 860.0091
LEU 870.0092
ALA 880.0093
ASN 890.0086
ILE 900.0075
MET 910.0085
LYS 920.0088
GLU 930.0066
ILE 940.0063
SER 950.0068
LEU 960.0069
LEU 970.0089
PRO 980.0121
ASP 990.0171
ASN 1000.0140
LEU 1010.0091
LEU 1020.0088
ARG 1030.0145
THR 1040.0105
PRO 1050.0136
SER 1060.0105
VAL 1070.0069
GLN 1080.0095
LEU 1090.0050
VAL 1100.0036
GLN 1110.0037
SER 1120.0022
TRP 1130.0036
TYR 1140.0047
ILE 1150.0071
GLN 1160.0081
SER 1170.0095
LEU 1180.0099
GLN 1190.0112
GLU 1200.0101
LEU 1210.0112
LEU 1220.0138
ASP 1230.0135
PHE 1240.0135
LYS 1250.0185
ASP 1260.0201
LYS 1270.0218
SER 1280.0244
ALA 1290.0225
GLU 1300.0268
ASP 1310.0261
ALA 1320.0232
LYS 1330.0206
ALA 1340.0158
ILE 1350.0097
TYR 1360.0102
ASP 1370.0065
PHE 1380.0052
THR 1390.0032
ASP 1400.0040
THR 1410.0065
VAL 1420.0076
ILE 1430.0071
ARG 1440.0082
ILE 1450.0085
ARG 1460.0088
ASN 1470.0085
ARG 1480.0088
HIS 1490.0062
ASN 1500.0061
ASP 1510.0077
VAL 1520.0082
ILE 1530.0096
PRO 1540.0131
THR 1550.0126
MET 1560.0091
ALA 1570.0110
GLN 1580.0160
GLY 1590.0102
VAL 1600.0092
ILE 1610.0166
GLU 1620.0113
TYR 1630.0103
LYS 1640.0134
GLU 1650.0154
SER 1660.0099
PHE 1670.0169
ASP 1700.0387
PRO 1710.0318
VAL 1720.0125
THR 1730.0097
SER 1740.0193
GLN 1750.0183
ASN 1760.0079
VAL 1770.0084
GLN 1780.0062
TYR 1790.0062
PHE 1800.0056
LEU 1810.0047
ASP 1820.0039
ARG 1830.0054
PHE 1840.0043
TYR 1850.0037
MET 1860.0044
SER 1870.0053
ARG 1880.0041
ILE 1890.0047
SER 1900.0069
ILE 1910.0080
ARG 1920.0068
MET 1930.0066
LEU 1940.0088
LEU 1950.0078
ASN 1960.0071
GLN 1970.0068
HIS 1980.0059
SER 1990.0062
LEU 2000.0059
LEU 2010.0045
PHE 2020.0028
GLY 2030.0045
HIS 2150.0125
ILE 2160.0107
GLY 2170.0090
SER 2180.0083
ILE 2190.0089
ASN 2200.0100
PRO 2210.0093
ASN 2220.0095
CYS 2230.0090
ASN 2240.0090
VAL 2250.0090
LEU 2260.0089
GLU 2270.0120
VAL 2280.0096
ILE 2290.0079
LYS 2300.0118
ASP 2310.0133
GLY 2320.0098
TYR 2330.0096
GLU 2340.0131
ASN 2350.0138
ALA 2360.0105
ARG 2370.0107
ARG 2380.0147
LEU 2390.0126
CYS 2400.0121
ASP 2410.0134
LEU 2420.0158
TYR 2430.0187
TYR 2440.0170
ILE 2450.0202
ASN 2460.0150
SER 2470.0100
PRO 2480.0080
GLU 2490.0104
LEU 2500.0098
GLU 2510.0119
LEU 2520.0124
GLU 2530.0192
GLU 2540.0143
LEU 2550.0167
ASN 2560.0086
ALA 2570.0066
LYS 2580.0166
SER 2590.0279
PRO 2600.0278
GLY 2610.0451
GLN 2620.0418
PRO 2630.0152
ILE 2640.0105
GLN 2650.0091
VAL 2660.0100
VAL 2670.0093
TYR 2680.0089
VAL 2690.0073
PRO 2700.0089
SER 2710.0081
HIS 2720.0065
LEU 2730.0078
TYR 2740.0091
HIS 2750.0074
HIS 2750.0074
MET 2760.0069
VAL 2770.0066
PHE 2780.0090
GLU 2790.0077
LEU 2800.0074
PHE 2810.0065
LYS 2820.0096
ASN 2830.0096
ALA 2840.0071
MET 2850.0076
ARG 2860.0088
ALA 2870.0086
THR 2880.0038
MET 2890.0050
GLU 2900.0125
HIS 2910.0169
HIS 2920.0204
ALA 2930.0309
ASN 2940.0526
ARG 2950.0489
GLY 2960.0310
VAL 2970.0286
TYR 2980.0163
PRO 2990.0094
PRO 3000.0094
ILE 3010.0035
GLN 3020.0058
VAL 3030.0063
HIS 3040.0095
VAL 3050.0083
THR 3060.0085
LEU 3070.0094
GLY 3080.0174
ASN 3090.0354
GLU 3100.0283
ASP 3110.0176
LEU 3120.0126
THR 3130.0099
VAL 3140.0080
LYS 3150.0052
MET 3160.0041
SER 3170.0016
ASP 3180.0034
ARG 3190.0063
GLY 3200.0060
GLY 3210.0077
GLY 3220.0087
VAL 3230.0164
PRO 3240.0191
LEU 3250.0183
ARG 3260.0275
LYS 3270.0192
ILE 3280.0094
ASP 3290.0076
ARG 3300.0047
LEU 3310.0035
PHE 3320.0017
ASN 3330.0046
TYR 3340.0050
MET 3350.0095
TYR 3360.0100
SER 3370.0134
THR 3380.0170
ALA 3390.0406
PRO 3400.0566
ARG 3410.0554
PRO 3420.0748
ARG 3430.0808
VAL 3440.0887
GLU 3450.0485
THR 3460.0258
SER 3470.0247
ARG 3480.0819
ALA 3490.0431
VAL 3500.0384
PRO 3510.0198
LEU 3520.0146
ALA 3530.0146
GLY 3540.0193
PHE 3550.0275
GLY 3560.0172
TYR 3570.0034
GLY 3580.0013
LEU 3590.0047
PRO 3600.0031
ILE 3610.0041
SER 3620.0061
ARG 3630.0057
LEU 3640.0048
TYR 3650.0065
ALA 3660.0078
GLN 3670.0065
TYR 3680.0064
PHE 3690.0081
GLN 3700.0081
GLY 3710.0090
ASP 3720.0091
LEU 3730.0076
LYS 3740.0075
LEU 3750.0065
TYR 3760.0062
TYR 3760.0061
SER 3770.0073
LEU 3780.0087
GLU 3790.0112
GLY 3800.0129
TYR 3810.0076
GLY 3820.0072
THR 3830.0063
ASP 3840.0054
ALA 3850.0072
VAL 3860.0069
ILE 3870.0094
TYR 3880.0099
ILE 3890.0115
LYS 3900.0128
ALA 3910.0157
LEU 3920.0174
SER 3930.0137
THR 3940.0127
ASP 3950.0131
SER 3960.0100
ILE 3970.0083
GLU 3980.0071
ARG 3990.0060
LEU 4000.0051
PRO 4010.0063
VAL 4020.0075
TYR 4030.0093
ASN 4040.0104
LYS 4050.0176
ALA 4060.0127
ALA 4070.0068
TRP 4080.0140
LYS 4090.0213
HIS 4100.0177
TYR 4110.0148
ASN 4120.0261
THR 4130.0376
ASN 4140.0489
ALA 4170.0017
ASP 4180.0039
ASP 4190.0033
TRP 4200.0045
CYS 4210.0052
VAL 4220.0036
PRO 4230.0025

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: december 26th, 2025.