CNRS Nantes University US2B US2B
home |  start a new run |  job status |  references&downloads |  examples |  help  

Should you encounter any unexpected behaviour,
please let us know.
elNémo has been hacked on november 27th.
It has been moved away and runs again.
**Still some additional cleaning from time to time**
Sorry for the inconvenience.


***  PDHK1 and DCA  ***

<R2> analysis for 2604162351172680512

---  normal mode 36  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.0541
GLY 410.0236
VAL 420.0173
PRO 430.0204
GLY 440.0190
GLN 450.0092
VAL 460.0081
ASP 470.0125
PHE 480.0108
TYR 490.0035
ALA 500.0043
ARG 510.0112
PHE 520.0100
SER 530.0078
PRO 540.0078
SER 550.0066
PRO 560.0078
LEU 570.0050
SER 580.0055
MET 590.0072
LYS 600.0036
GLN 610.0026
PHE 620.0061
LEU 630.0095
ASP 640.0114
PHE 650.0129
GLY 660.0182
SER 670.0343
CYS 710.0239
GLU 720.0168
LYS 730.0142
THR 740.0154
SER 750.0095
PHE 760.0061
MET 770.0092
PHE 780.0080
LEU 790.0070
ARG 800.0085
GLN 810.0057
GLU 820.0058
LEU 830.0047
PRO 840.0040
VAL 850.0035
ARG 860.0040
LEU 870.0050
ALA 880.0038
ASN 890.0035
ILE 900.0064
MET 910.0100
LYS 920.0082
GLU 930.0099
ILE 940.0129
SER 950.0140
LEU 960.0127
LEU 970.0166
PRO 980.0178
ASP 990.0405
ASN 1000.0367
LEU 1010.0206
LEU 1020.0245
ARG 1030.0382
THR 1040.0233
PRO 1050.0175
SER 1060.0104
VAL 1070.0145
GLN 1080.0198
LEU 1090.0158
VAL 1100.0149
GLN 1110.0170
SER 1120.0180
TRP 1130.0155
TYR 1140.0143
ILE 1150.0118
GLN 1160.0114
SER 1170.0075
LEU 1180.0054
GLN 1190.0036
GLU 1200.0019
LEU 1210.0053
LEU 1220.0064
ASP 1230.0154
PHE 1240.0159
LYS 1250.0173
ASP 1260.0282
LYS 1270.0280
SER 1280.0230
ALA 1290.0121
GLU 1300.0073
ASP 1310.0205
ALA 1320.0280
LYS 1330.0398
ALA 1340.0256
ILE 1350.0130
TYR 1360.0257
ASP 1370.0230
PHE 1380.0126
THR 1390.0077
ASP 1400.0115
THR 1410.0069
VAL 1420.0051
ILE 1430.0037
ARG 1440.0056
ILE 1450.0051
ARG 1460.0057
ASN 1470.0078
ARG 1480.0095
HIS 1490.0129
ASN 1500.0126
ASP 1510.0136
VAL 1520.0112
ILE 1530.0069
PRO 1540.0058
THR 1550.0065
MET 1560.0064
ALA 1570.0032
GLN 1580.0044
GLY 1590.0105
VAL 1600.0082
ILE 1610.0132
GLU 1620.0204
TYR 1630.0237
LYS 1640.0229
GLU 1650.0421
SER 1660.0516
PHE 1670.0439
ASP 1700.0442
PRO 1710.0519
VAL 1720.0387
THR 1730.0207
SER 1740.0211
GLN 1750.0237
ASN 1760.0106
VAL 1770.0103
GLN 1780.0103
TYR 1790.0081
PHE 1800.0078
LEU 1810.0063
ASP 1820.0052
ARG 1830.0052
PHE 1840.0050
TYR 1850.0058
MET 1860.0064
SER 1870.0051
ARG 1880.0043
ILE 1890.0073
SER 1900.0068
ILE 1910.0060
ARG 1920.0053
MET 1930.0067
LEU 1940.0049
LEU 1950.0056
ASN 1960.0087
GLN 1970.0078
HIS 1980.0072
SER 1990.0090
LEU 2000.0145
LEU 2010.0143
PHE 2020.0160
GLY 2030.0175
HIS 2150.0210
ILE 2160.0169
GLY 2170.0151
SER 2180.0151
ILE 2190.0138
ASN 2200.0145
PRO 2210.0121
ASN 2220.0125
CYS 2230.0147
ASN 2240.0129
VAL 2250.0129
LEU 2260.0119
GLU 2270.0104
VAL 2280.0107
ILE 2290.0083
LYS 2300.0067
ASP 2310.0061
GLY 2320.0043
TYR 2330.0013
GLU 2340.0058
ASN 2350.0057
ALA 2360.0086
ARG 2370.0110
ARG 2380.0192
LEU 2390.0224
CYS 2400.0196
ASP 2410.0239
LEU 2420.0330
TYR 2430.0339
TYR 2440.0258
ILE 2450.0332
ASN 2460.0206
SER 2470.0105
PRO 2480.0042
GLU 2490.0062
LEU 2500.0048
GLU 2510.0061
LEU 2520.0080
GLU 2530.0156
GLU 2540.0121
LEU 2550.0108
ASN 2560.0056
ALA 2570.0064
LYS 2580.0132
SER 2590.0214
PRO 2600.0176
GLY 2610.0287
GLN 2620.0286
PRO 2630.0180
ILE 2640.0089
GLN 2650.0109
VAL 2660.0103
VAL 2670.0112
TYR 2680.0128
VAL 2690.0146
PRO 2700.0155
SER 2710.0130
HIS 2720.0126
LEU 2730.0129
TYR 2740.0096
HIS 2750.0090
HIS 2750.0090
MET 2760.0092
VAL 2770.0087
PHE 2780.0050
GLU 2790.0061
LEU 2800.0061
PHE 2810.0083
LYS 2820.0121
ASN 2830.0112
ALA 2840.0092
MET 2850.0108
ARG 2860.0161
ALA 2870.0102
THR 2880.0081
MET 2890.0074
GLU 2900.0125
HIS 2910.0181
HIS 2920.0155
ALA 2930.0153
ASN 2940.0375
ARG 2950.0342
GLY 2960.0284
VAL 2970.0218
TYR 2980.0071
PRO 2990.0052
PRO 3000.0034
ILE 3010.0046
GLN 3020.0067
VAL 3030.0076
HIS 3040.0096
VAL 3050.0110
THR 3060.0091
LEU 3070.0052
GLY 3080.0067
ASN 3090.0111
GLU 3100.0100
ASP 3110.0100
LEU 3120.0102
THR 3130.0098
VAL 3140.0103
LYS 3150.0088
MET 3160.0068
SER 3170.0095
ASP 3180.0103
ARG 3190.0109
GLY 3200.0127
GLY 3210.0198
GLY 3220.0236
VAL 3230.0318
PRO 3240.0374
LEU 3250.0237
ARG 3260.0245
LYS 3270.0233
ILE 3280.0145
ASP 3290.0085
ARG 3300.0141
LEU 3310.0084
PHE 3320.0086
ASN 3330.0057
TYR 3340.0035
MET 3350.0047
TYR 3360.0033
SER 3370.0102
THR 3380.0070
ALA 3390.0172
PRO 3400.0180
ARG 3410.0204
PRO 3420.0286
ARG 3430.0380
VAL 3440.0370
GLU 3450.0428
THR 3460.0422
SER 3470.0424
ARG 3480.0541
ALA 3490.0486
VAL 3500.0493
PRO 3510.0384
LEU 3520.0308
ALA 3530.0340
GLY 3540.0290
PHE 3550.0155
GLY 3560.0122
TYR 3570.0076
GLY 3580.0092
LEU 3590.0065
PRO 3600.0074
ILE 3610.0084
SER 3620.0088
ARG 3630.0080
LEU 3640.0084
TYR 3650.0111
ALA 3660.0118
GLN 3670.0119
TYR 3680.0110
PHE 3690.0126
GLN 3700.0132
GLY 3710.0142
ASP 3720.0118
LEU 3730.0085
LYS 3740.0081
LEU 3750.0077
TYR 3760.0124
TYR 3760.0125
SER 3770.0241
LEU 3780.0353
GLU 3790.0446
GLY 3800.0384
TYR 3810.0285
GLY 3820.0196
THR 3830.0108
ASP 3840.0107
ALA 3850.0064
VAL 3860.0082
ILE 3870.0109
TYR 3880.0104
ILE 3890.0132
LYS 3900.0119
ALA 3910.0086
LEU 3920.0068
SER 3930.0079
THR 3940.0062
ASP 3950.0092
SER 3960.0108
ILE 3970.0097
GLU 3980.0099
ARG 3990.0100
LEU 4000.0088
PRO 4010.0077
VAL 4020.0068
TYR 4030.0066
ASN 4040.0139
LYS 4050.0327
ALA 4060.0305
ALA 4070.0146
TRP 4080.0156
LYS 4090.0213
HIS 4100.0137
TYR 4110.0073
ASN 4120.0128
THR 4130.0080
ASN 4140.0273
ALA 4170.0017
ASP 4180.0012
ASP 4190.0035
TRP 4200.0011
CYS 4210.0009
VAL 4220.0015
PRO 4230.0008

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: december 26th, 2025.