CNRS Nantes University US2B US2B
home |  start a new run |  job status |  references&downloads |  examples |  help  

Should you encounter any unexpected behaviour,
please let us know.
elNémo has been hacked on november 27th.
It has been moved away and runs again.
**Still some additional cleaning from time to time**
Sorry for the inconvenience.


***  PDHK1 and DCA  ***

<R2> analysis for 2604162351172680512

---  normal mode 38  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.0829
GLY 410.0776
VAL 420.0464
PRO 430.0636
GLY 440.0655
GLN 450.0316
VAL 460.0235
ASP 470.0395
PHE 480.0426
TYR 490.0211
ALA 500.0184
ARG 510.0343
PHE 520.0312
SER 530.0195
PRO 540.0163
SER 550.0140
PRO 560.0143
LEU 570.0123
SER 580.0131
MET 590.0119
LYS 600.0152
GLN 610.0127
PHE 620.0103
LEU 630.0106
ASP 640.0107
PHE 650.0077
GLY 660.0079
SER 670.0181
CYS 710.0354
GLU 720.0266
LYS 730.0336
THR 740.0281
SER 750.0136
PHE 760.0133
MET 770.0216
PHE 780.0130
LEU 790.0099
ARG 800.0191
GLN 810.0164
GLU 820.0163
LEU 830.0138
PRO 840.0128
VAL 850.0120
ARG 860.0108
LEU 870.0059
ALA 880.0044
ASN 890.0022
ILE 900.0062
MET 910.0113
LYS 920.0128
GLU 930.0133
ILE 940.0142
SER 950.0139
LEU 960.0134
LEU 970.0145
PRO 980.0112
ASP 990.0171
ASN 1000.0131
LEU 1010.0130
LEU 1020.0157
ARG 1030.0178
THR 1040.0119
PRO 1050.0117
SER 1060.0116
VAL 1070.0140
GLN 1080.0145
LEU 1090.0117
VAL 1100.0120
GLN 1110.0126
SER 1120.0100
TRP 1130.0076
TYR 1140.0084
ILE 1150.0056
GLN 1160.0055
SER 1170.0122
LEU 1180.0098
GLN 1190.0115
GLU 1200.0180
LEU 1210.0198
LEU 1220.0190
ASP 1230.0289
PHE 1240.0237
LYS 1250.0242
ASP 1260.0375
LYS 1270.0456
SER 1280.0467
ALA 1290.0494
GLU 1300.0602
ASP 1310.0380
ALA 1320.0287
LYS 1330.0130
ALA 1340.0178
ILE 1350.0149
TYR 1360.0194
ASP 1370.0179
PHE 1380.0146
THR 1390.0130
ASP 1400.0181
THR 1410.0163
VAL 1420.0144
ILE 1430.0152
ARG 1440.0171
ILE 1450.0146
ARG 1460.0139
ASN 1470.0126
ARG 1480.0117
HIS 1490.0053
ASN 1500.0069
ASP 1510.0064
VAL 1520.0077
ILE 1530.0092
PRO 1540.0109
THR 1550.0108
MET 1560.0117
ALA 1570.0104
GLN 1580.0071
GLY 1590.0097
VAL 1600.0086
ILE 1610.0068
GLU 1620.0074
TYR 1630.0083
LYS 1640.0072
GLU 1650.0091
SER 1660.0123
PHE 1670.0112
ASP 1700.0157
PRO 1710.0257
VAL 1720.0215
THR 1730.0036
SER 1740.0100
GLN 1750.0172
ASN 1760.0101
VAL 1770.0128
GLN 1780.0102
TYR 1790.0122
PHE 1800.0128
LEU 1810.0120
ASP 1820.0089
ARG 1830.0100
PHE 1840.0083
TYR 1850.0080
MET 1860.0048
SER 1870.0045
ARG 1880.0033
ILE 1890.0054
SER 1900.0086
ILE 1910.0092
ARG 1920.0111
MET 1930.0099
LEU 1940.0107
LEU 1950.0115
ASN 1960.0096
GLN 1970.0080
HIS 1980.0102
SER 1990.0117
LEU 2000.0139
LEU 2010.0141
PHE 2020.0215
GLY 2030.0237
HIS 2150.0093
ILE 2160.0092
GLY 2170.0074
SER 2180.0091
ILE 2190.0102
ASN 2200.0125
PRO 2210.0145
ASN 2220.0159
CYS 2230.0112
ASN 2240.0103
VAL 2250.0055
LEU 2260.0067
GLU 2270.0085
VAL 2280.0059
ILE 2290.0054
LYS 2300.0061
ASP 2310.0057
GLY 2320.0057
TYR 2330.0055
GLU 2340.0047
ASN 2350.0041
ALA 2360.0035
ARG 2370.0033
ARG 2380.0035
LEU 2390.0029
CYS 2400.0030
ASP 2410.0057
LEU 2420.0057
TYR 2430.0052
TYR 2440.0058
ILE 2450.0090
ASN 2460.0091
SER 2470.0062
PRO 2480.0060
GLU 2490.0060
LEU 2500.0068
GLU 2510.0074
LEU 2520.0084
GLU 2530.0122
GLU 2540.0090
LEU 2550.0095
ASN 2560.0077
ALA 2570.0122
LYS 2580.0126
SER 2590.0157
PRO 2600.0149
GLY 2610.0108
GLN 2620.0043
PRO 2630.0076
ILE 2640.0049
GLN 2650.0098
VAL 2660.0097
VAL 2670.0125
TYR 2680.0100
VAL 2690.0088
PRO 2700.0097
SER 2710.0074
HIS 2720.0057
LEU 2730.0051
TYR 2740.0062
HIS 2750.0067
HIS 2750.0067
MET 2760.0063
VAL 2770.0062
PHE 2780.0061
GLU 2790.0068
LEU 2800.0064
PHE 2810.0051
LYS 2820.0040
ASN 2830.0050
ALA 2840.0049
MET 2850.0040
ARG 2860.0036
ALA 2870.0040
THR 2880.0044
MET 2890.0073
GLU 2900.0070
HIS 2910.0054
HIS 2920.0075
ALA 2930.0197
ASN 2940.0284
ARG 2950.0229
GLY 2960.0190
VAL 2970.0082
TYR 2980.0043
PRO 2990.0037
PRO 3000.0044
ILE 3010.0051
GLN 3020.0059
VAL 3030.0073
HIS 3040.0088
VAL 3050.0066
THR 3060.0070
LEU 3070.0053
GLY 3080.0086
ASN 3090.0083
GLU 3100.0062
ASP 3110.0048
LEU 3120.0039
THR 3130.0056
VAL 3140.0056
LYS 3150.0068
MET 3160.0059
SER 3170.0050
ASP 3180.0044
ARG 3190.0040
GLY 3200.0039
GLY 3210.0114
GLY 3220.0137
VAL 3230.0167
PRO 3240.0198
LEU 3250.0127
ARG 3260.0160
LYS 3270.0120
ILE 3280.0066
ASP 3290.0053
ARG 3300.0080
LEU 3310.0072
PHE 3320.0076
ASN 3330.0061
TYR 3340.0059
MET 3350.0052
TYR 3360.0058
SER 3370.0048
THR 3380.0037
ALA 3390.0103
PRO 3400.0246
ARG 3410.0355
PRO 3420.0618
ARG 3430.0829
VAL 3440.0424
GLU 3450.0392
THR 3460.0304
SER 3470.0065
ARG 3480.0313
ALA 3490.0166
VAL 3500.0154
PRO 3510.0067
LEU 3520.0042
ALA 3530.0048
GLY 3540.0090
PHE 3550.0138
GLY 3560.0157
TYR 3570.0078
GLY 3580.0082
LEU 3590.0076
PRO 3600.0073
ILE 3610.0064
SER 3620.0066
ARG 3630.0070
LEU 3640.0057
TYR 3650.0046
ALA 3660.0051
GLN 3670.0046
TYR 3680.0048
PHE 3690.0062
GLN 3700.0044
GLY 3710.0037
ASP 3720.0051
LEU 3730.0067
LYS 3740.0065
LEU 3750.0056
TYR 3760.0062
TYR 3760.0064
SER 3770.0123
LEU 3780.0187
GLU 3790.0239
GLY 3800.0202
TYR 3810.0157
GLY 3820.0107
THR 3830.0061
ASP 3840.0062
ALA 3850.0054
VAL 3860.0065
ILE 3870.0057
TYR 3880.0052
ILE 3890.0047
LYS 3900.0049
ALA 3910.0065
LEU 3920.0094
SER 3930.0118
THR 3940.0124
ASP 3950.0081
SER 3960.0091
ILE 3970.0101
GLU 3980.0094
ARG 3990.0066
LEU 4000.0072
PRO 4010.0056
VAL 4020.0026
TYR 4030.0075
ASN 4040.0103
LYS 4050.0258
ALA 4060.0240
ALA 4070.0185
TRP 4080.0150
LYS 4090.0153
HIS 4100.0185
TYR 4110.0046
ASN 4120.0061
THR 4130.0295
ASN 4140.0820
ALA 4170.0039
ASP 4180.0042
ASP 4190.0091
TRP 4200.0045
CYS 4210.0015
VAL 4220.0038
PRO 4230.0025

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: december 26th, 2025.