CNRS Nantes University US2B US2B
home |  start a new run |  job status |  references&downloads |  examples |  help  

Should you encounter any unexpected behaviour,
please let us know.
elNémo has been hacked on november 27th.
It has been moved away and runs again.
**Still some additional cleaning from time to time**
Sorry for the inconvenience.


***  PDHK1 and DCA  ***

<R2> analysis for 2604162351172680512

---  normal mode 39  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.0866
GLY 410.0383
VAL 420.0321
PRO 430.0471
GLY 440.0357
GLN 450.0186
VAL 460.0217
ASP 470.0334
PHE 480.0256
TYR 490.0133
ALA 500.0192
ARG 510.0291
PHE 520.0209
SER 530.0123
PRO 540.0062
SER 550.0030
PRO 560.0038
LEU 570.0078
SER 580.0090
MET 590.0117
LYS 600.0131
GLN 610.0132
PHE 620.0139
LEU 630.0169
ASP 640.0165
PHE 650.0214
GLY 660.0220
SER 670.0227
CYS 710.0415
GLU 720.0328
LYS 730.0343
THR 740.0400
SER 750.0271
PHE 760.0201
MET 770.0268
PHE 780.0216
LEU 790.0190
ARG 800.0212
GLN 810.0107
GLU 820.0102
LEU 830.0123
PRO 840.0117
VAL 850.0049
ARG 860.0062
LEU 870.0092
ALA 880.0109
ASN 890.0096
ILE 900.0095
MET 910.0102
LYS 920.0138
GLU 930.0113
ILE 940.0110
SER 950.0123
LEU 960.0126
LEU 970.0122
PRO 980.0141
ASP 990.0228
ASN 1000.0224
LEU 1010.0183
LEU 1020.0190
ARG 1030.0246
THR 1040.0223
PRO 1050.0232
SER 1060.0207
VAL 1070.0171
GLN 1080.0175
LEU 1090.0133
VAL 1100.0105
GLN 1110.0060
SER 1120.0028
TRP 1130.0012
TYR 1140.0024
ILE 1150.0091
GLN 1160.0121
SER 1170.0125
LEU 1180.0124
GLN 1190.0116
GLU 1200.0150
LEU 1210.0161
LEU 1220.0162
ASP 1230.0239
PHE 1240.0220
LYS 1250.0272
ASP 1260.0448
LYS 1270.0351
SER 1280.0239
ALA 1290.0264
GLU 1300.0248
ASP 1310.0226
ALA 1320.0467
LYS 1330.0555
ALA 1340.0218
ILE 1350.0150
TYR 1360.0344
ASP 1370.0202
PHE 1380.0059
THR 1390.0165
ASP 1400.0087
THR 1410.0084
VAL 1420.0147
ILE 1430.0129
ARG 1440.0100
ILE 1450.0130
ARG 1460.0141
ASN 1470.0106
ARG 1480.0113
HIS 1490.0056
ASN 1500.0075
ASP 1510.0084
VAL 1520.0094
ILE 1530.0129
PRO 1540.0174
THR 1550.0163
MET 1560.0147
ALA 1570.0148
GLN 1580.0158
GLY 1590.0176
VAL 1600.0132
ILE 1610.0111
GLU 1620.0165
TYR 1630.0170
LYS 1640.0127
GLU 1650.0164
SER 1660.0250
PHE 1670.0221
ASP 1700.0792
PRO 1710.0716
VAL 1720.0365
THR 1730.0184
SER 1740.0273
GLN 1750.0234
ASN 1760.0134
VAL 1770.0148
GLN 1780.0131
TYR 1790.0122
PHE 1800.0107
LEU 1810.0087
ASP 1820.0065
ARG 1830.0072
PHE 1840.0045
TYR 1850.0041
MET 1860.0009
SER 1870.0020
ARG 1880.0040
ILE 1890.0034
SER 1900.0062
ILE 1910.0087
ARG 1920.0119
MET 1930.0122
LEU 1940.0140
LEU 1950.0155
ASN 1960.0178
GLN 1970.0181
HIS 1980.0195
SER 1990.0167
LEU 2000.0178
LEU 2010.0198
PHE 2020.0206
GLY 2030.0155
HIS 2150.0283
ILE 2160.0240
GLY 2170.0221
SER 2180.0212
ILE 2190.0180
ASN 2200.0189
PRO 2210.0196
ASN 2220.0181
CYS 2230.0091
ASN 2240.0044
VAL 2250.0023
LEU 2260.0033
GLU 2270.0035
VAL 2280.0028
ILE 2290.0033
LYS 2300.0049
ASP 2310.0058
GLY 2320.0039
TYR 2330.0055
GLU 2340.0061
ASN 2350.0060
ALA 2360.0054
ARG 2370.0072
ARG 2380.0080
LEU 2390.0071
CYS 2400.0076
ASP 2410.0089
LEU 2420.0093
TYR 2430.0084
TYR 2440.0092
ILE 2450.0112
ASN 2460.0075
SER 2470.0068
PRO 2480.0066
GLU 2490.0054
LEU 2500.0056
GLU 2510.0048
LEU 2520.0053
GLU 2530.0056
GLU 2540.0032
LEU 2550.0044
ASN 2560.0058
ALA 2570.0129
LYS 2580.0136
SER 2590.0190
PRO 2600.0142
GLY 2610.0058
GLN 2620.0125
PRO 2630.0095
ILE 2640.0020
GLN 2650.0054
VAL 2660.0076
VAL 2670.0116
TYR 2680.0101
VAL 2690.0111
PRO 2700.0108
SER 2710.0094
HIS 2720.0070
LEU 2730.0045
TYR 2740.0035
HIS 2750.0041
HIS 2750.0041
MET 2760.0028
VAL 2770.0010
PHE 2780.0011
GLU 2790.0014
LEU 2800.0018
PHE 2810.0036
LYS 2820.0030
ASN 2830.0044
ALA 2840.0052
MET 2850.0062
ARG 2860.0062
ALA 2870.0089
THR 2880.0087
MET 2890.0083
GLU 2900.0099
HIS 2910.0134
HIS 2920.0122
ALA 2930.0112
ASN 2940.0188
ARG 2950.0166
GLY 2960.0126
VAL 2970.0104
TYR 2980.0085
PRO 2990.0080
PRO 3000.0066
ILE 3010.0056
GLN 3020.0054
VAL 3030.0041
HIS 3040.0028
VAL 3050.0033
THR 3060.0031
LEU 3070.0033
GLY 3080.0051
ASN 3090.0049
GLU 3100.0037
ASP 3110.0034
LEU 3120.0033
THR 3130.0020
VAL 3140.0014
LYS 3150.0025
MET 3160.0026
SER 3170.0063
ASP 3180.0071
ARG 3190.0106
GLY 3200.0103
GLY 3210.0095
GLY 3220.0087
VAL 3230.0049
PRO 3240.0087
LEU 3250.0145
ARG 3260.0182
LYS 3270.0059
ILE 3280.0067
ASP 3290.0076
ARG 3300.0055
LEU 3310.0060
PHE 3320.0059
ASN 3330.0071
TYR 3340.0061
MET 3350.0114
TYR 3360.0067
SER 3370.0074
THR 3380.0066
ALA 3390.0187
PRO 3400.0336
ARG 3410.0376
PRO 3420.0688
ARG 3430.0866
VAL 3440.0476
GLU 3450.0247
THR 3460.0243
SER 3470.0128
ARG 3480.0109
ALA 3490.0125
VAL 3500.0045
PRO 3510.0033
LEU 3520.0038
ALA 3530.0050
GLY 3540.0106
PHE 3550.0159
GLY 3560.0160
TYR 3570.0058
GLY 3580.0086
LEU 3590.0048
PRO 3600.0033
ILE 3610.0037
SER 3620.0041
ARG 3630.0039
LEU 3640.0029
TYR 3650.0041
ALA 3660.0031
GLN 3670.0035
TYR 3680.0040
PHE 3690.0056
GLN 3700.0041
GLY 3710.0020
ASP 3720.0029
LEU 3730.0033
LYS 3740.0050
LEU 3750.0071
TYR 3760.0075
TYR 3760.0074
SER 3770.0088
LEU 3780.0073
GLU 3790.0046
GLY 3800.0065
TYR 3810.0090
GLY 3820.0095
THR 3830.0070
ASP 3840.0071
ALA 3850.0042
VAL 3860.0030
ILE 3870.0018
TYR 3880.0014
ILE 3890.0042
LYS 3900.0047
ALA 3910.0074
LEU 3920.0084
SER 3930.0114
THR 3940.0106
ASP 3950.0070
SER 3960.0073
ILE 3970.0058
GLU 3980.0055
ARG 3990.0031
LEU 4000.0035
PRO 4010.0071
VAL 4020.0122
TYR 4030.0178
ASN 4040.0212
LYS 4050.0301
ALA 4060.0199
ALA 4070.0155
TRP 4080.0224
LYS 4090.0174
HIS 4100.0108
TYR 4110.0187
ASN 4120.0264
THR 4130.0282
ASN 4140.0480
ALA 4170.0055
ASP 4180.0033
ASP 4190.0068
TRP 4200.0047
CYS 4210.0073
VAL 4220.0064
PRO 4230.0016

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: december 26th, 2025.