CNRS Nantes University US2B US2B
home |  start a new run |  job status |  references&downloads |  examples |  help  

Should you encounter any unexpected behaviour,
please let us know.
elNémo has been hacked on november 27th.
It has been moved away and runs again.
**Still some additional cleaning from time to time**
Sorry for the inconvenience.


***  PDHK1 and DCA  ***

<R2> analysis for 2604162351172680512

---  normal mode 40  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.0729
GLY 410.0512
VAL 420.0333
PRO 430.0345
GLY 440.0283
GLN 450.0176
VAL 460.0156
ASP 470.0185
PHE 480.0154
TYR 490.0112
ALA 500.0119
ARG 510.0123
PHE 520.0076
SER 530.0075
PRO 540.0061
SER 550.0108
PRO 560.0118
LEU 570.0154
SER 580.0159
MET 590.0144
LYS 600.0229
GLN 610.0191
PHE 620.0112
LEU 630.0154
ASP 640.0205
PHE 650.0092
GLY 660.0102
SER 670.0280
CYS 710.0137
GLU 720.0198
LYS 730.0257
THR 740.0205
SER 750.0218
PHE 760.0209
MET 770.0155
PHE 780.0157
LEU 790.0172
ARG 800.0153
GLN 810.0108
GLU 820.0114
LEU 830.0111
PRO 840.0100
VAL 850.0086
ARG 860.0070
LEU 870.0058
ALA 880.0061
ASN 890.0047
ILE 900.0030
MET 910.0038
LYS 920.0073
GLU 930.0055
ILE 940.0064
SER 950.0069
LEU 960.0072
LEU 970.0115
PRO 980.0114
ASP 990.0186
ASN 1000.0170
LEU 1010.0147
LEU 1020.0150
ARG 1030.0169
THR 1040.0126
PRO 1050.0119
SER 1060.0123
VAL 1070.0122
GLN 1080.0125
LEU 1090.0113
VAL 1100.0104
GLN 1110.0078
SER 1120.0068
TRP 1130.0050
TYR 1140.0041
ILE 1150.0044
GLN 1160.0026
SER 1170.0060
LEU 1180.0089
GLN 1190.0104
GLU 1200.0109
LEU 1210.0141
LEU 1220.0150
ASP 1230.0170
PHE 1240.0199
LYS 1250.0210
ASP 1260.0273
LYS 1270.0262
SER 1280.0302
ALA 1290.0273
GLU 1300.0366
ASP 1310.0305
ALA 1320.0305
LYS 1330.0265
ALA 1340.0252
ILE 1350.0252
TYR 1360.0258
ASP 1370.0232
PHE 1380.0223
THR 1390.0209
ASP 1400.0207
THR 1410.0183
VAL 1420.0177
ILE 1430.0143
ARG 1440.0138
ILE 1450.0136
ARG 1460.0132
ASN 1470.0108
ARG 1480.0114
HIS 1490.0125
ASN 1500.0149
ASP 1510.0115
VAL 1520.0119
ILE 1530.0120
PRO 1540.0105
THR 1550.0109
MET 1560.0118
ALA 1570.0115
GLN 1580.0109
GLY 1590.0128
VAL 1600.0132
ILE 1610.0123
GLU 1620.0120
TYR 1630.0151
LYS 1640.0140
GLU 1650.0138
SER 1660.0159
PHE 1670.0179
ASP 1700.0387
PRO 1710.0374
VAL 1720.0204
THR 1730.0159
SER 1740.0236
GLN 1750.0251
ASN 1760.0150
VAL 1770.0138
GLN 1780.0144
TYR 1790.0119
PHE 1800.0106
LEU 1810.0103
ASP 1820.0102
ARG 1830.0073
PHE 1840.0084
TYR 1850.0094
MET 1860.0083
SER 1870.0074
ARG 1880.0090
ILE 1890.0082
SER 1900.0057
ILE 1910.0066
ARG 1920.0097
MET 1930.0059
LEU 1940.0091
LEU 1950.0116
ASN 1960.0113
GLN 1970.0075
HIS 1980.0154
SER 1990.0137
LEU 2000.0115
LEU 2010.0087
PHE 2020.0151
GLY 2030.0153
HIS 2150.0233
ILE 2160.0172
GLY 2170.0110
SER 2180.0110
ILE 2190.0103
ASN 2200.0137
PRO 2210.0145
ASN 2220.0125
CYS 2230.0060
ASN 2240.0057
VAL 2250.0085
LEU 2260.0089
GLU 2270.0023
VAL 2280.0064
ILE 2290.0053
LYS 2300.0051
ASP 2310.0101
GLY 2320.0076
TYR 2330.0061
GLU 2340.0088
ASN 2350.0086
ALA 2360.0043
ARG 2370.0079
ARG 2380.0125
LEU 2390.0104
CYS 2400.0109
ASP 2410.0164
LEU 2420.0202
TYR 2430.0212
TYR 2440.0183
ILE 2450.0258
ASN 2460.0160
SER 2470.0079
PRO 2480.0074
GLU 2490.0036
LEU 2500.0045
GLU 2510.0098
LEU 2520.0172
GLU 2530.0414
GLU 2540.0351
LEU 2550.0429
ASN 2560.0254
ALA 2570.0398
LYS 2580.0461
SER 2590.0382
PRO 2600.0296
GLY 2610.0729
GLN 2620.0642
PRO 2630.0335
ILE 2640.0132
GLN 2650.0074
VAL 2660.0081
VAL 2670.0119
TYR 2680.0094
VAL 2690.0074
PRO 2700.0110
SER 2710.0130
HIS 2720.0120
LEU 2730.0123
TYR 2740.0107
HIS 2750.0135
HIS 2750.0135
MET 2760.0123
VAL 2770.0077
PHE 2780.0073
GLU 2790.0094
LEU 2800.0075
PHE 2810.0018
LYS 2820.0016
ASN 2830.0038
ALA 2840.0041
MET 2850.0056
ARG 2860.0092
ALA 2870.0101
THR 2880.0088
MET 2890.0066
GLU 2900.0104
HIS 2910.0153
HIS 2920.0146
ALA 2930.0138
ASN 2940.0355
ARG 2950.0374
GLY 2960.0311
VAL 2970.0250
TYR 2980.0144
PRO 2990.0114
PRO 3000.0056
ILE 3010.0042
GLN 3020.0061
VAL 3030.0141
HIS 3040.0259
VAL 3050.0266
THR 3060.0310
LEU 3070.0288
GLY 3080.0388
ASN 3090.0536
GLU 3100.0348
ASP 3110.0270
LEU 3120.0237
THR 3130.0241
VAL 3140.0177
LYS 3150.0156
MET 3160.0077
SER 3170.0031
ASP 3180.0052
ARG 3190.0127
GLY 3200.0132
GLY 3210.0124
GLY 3220.0116
VAL 3230.0085
PRO 3240.0120
LEU 3250.0201
ARG 3260.0220
LYS 3270.0131
ILE 3280.0158
ASP 3290.0169
ARG 3300.0139
LEU 3310.0127
PHE 3320.0142
ASN 3330.0135
TYR 3340.0117
MET 3350.0140
TYR 3360.0121
SER 3370.0109
THR 3380.0108
ALA 3390.0106
PRO 3400.0104
ARG 3410.0168
PRO 3420.0262
ARG 3430.0402
VAL 3440.0276
GLU 3450.0351
THR 3460.0266
SER 3470.0230
ARG 3480.0316
ALA 3490.0266
VAL 3500.0267
PRO 3510.0216
LEU 3520.0153
ALA 3530.0174
GLY 3540.0150
PHE 3550.0104
GLY 3560.0117
TYR 3570.0117
GLY 3580.0126
LEU 3590.0129
PRO 3600.0142
ILE 3610.0146
SER 3620.0143
ARG 3630.0134
LEU 3640.0136
TYR 3650.0127
ALA 3660.0112
GLN 3670.0093
TYR 3680.0087
PHE 3690.0099
GLN 3700.0129
GLY 3710.0124
ASP 3720.0123
LEU 3730.0106
LYS 3740.0117
LEU 3750.0113
TYR 3760.0104
TYR 3760.0102
SER 3770.0113
LEU 3780.0103
GLU 3790.0092
GLY 3800.0059
TYR 3810.0095
GLY 3820.0098
THR 3830.0062
ASP 3840.0064
ALA 3850.0086
VAL 3860.0112
ILE 3870.0133
TYR 3880.0161
ILE 3890.0178
LYS 3900.0203
ALA 3910.0273
LEU 3920.0308
SER 3930.0243
THR 3940.0269
ASP 3950.0233
SER 3960.0183
ILE 3970.0149
GLU 3980.0109
ARG 3990.0104
LEU 4000.0088
PRO 4010.0043
VAL 4020.0057
TYR 4030.0087
ASN 4040.0100
LYS 4050.0160
ALA 4060.0090
ALA 4070.0068
TRP 4080.0127
LYS 4090.0138
HIS 4100.0108
TYR 4110.0143
ASN 4120.0221
THR 4130.0293
ASN 4140.0398
ALA 4170.0015
ASP 4180.0025
ASP 4190.0023
TRP 4200.0026
CYS 4210.0031
VAL 4220.0021
PRO 4230.0011

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: december 26th, 2025.