CNRS Nantes University US2B US2B
home |  start a new run |  job status |  references&downloads |  examples |  help  

Should you encounter any unexpected behaviour,
please let us know.
elNémo has been hacked on november 27th.
It has been moved away and runs again.
**Still some additional cleaning from time to time**
Sorry for the inconvenience.


***  PDHK1 and DCA  ***

<R2> analysis for 2604162351172680512

---  normal mode 41  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.0934
GLY 410.0934
VAL 420.0534
PRO 430.0613
GLY 440.0603
GLN 450.0284
VAL 460.0163
ASP 470.0254
PHE 480.0287
TYR 490.0120
ALA 500.0063
ARG 510.0165
PHE 520.0178
SER 530.0113
PRO 540.0145
SER 550.0155
PRO 560.0139
LEU 570.0183
SER 580.0158
MET 590.0163
LYS 600.0296
GLN 610.0282
PHE 620.0167
LEU 630.0220
ASP 640.0319
PHE 650.0175
GLY 660.0135
SER 670.0332
CYS 710.0120
GLU 720.0087
LYS 730.0094
THR 740.0183
SER 750.0168
PHE 760.0137
MET 770.0163
PHE 780.0210
LEU 790.0210
ARG 800.0175
GLN 810.0171
GLU 820.0199
LEU 830.0173
PRO 840.0115
VAL 850.0097
ARG 860.0112
LEU 870.0066
ALA 880.0021
ASN 890.0038
ILE 900.0049
MET 910.0066
LYS 920.0091
GLU 930.0049
ILE 940.0042
SER 950.0056
LEU 960.0040
LEU 970.0058
PRO 980.0046
ASP 990.0086
ASN 1000.0085
LEU 1010.0063
LEU 1020.0075
ARG 1030.0111
THR 1040.0078
PRO 1050.0080
SER 1060.0085
VAL 1070.0078
GLN 1080.0078
LEU 1090.0067
VAL 1100.0065
GLN 1110.0047
SER 1120.0037
TRP 1130.0044
TYR 1140.0030
ILE 1150.0021
GLN 1160.0037
SER 1170.0064
LEU 1180.0066
GLN 1190.0077
GLU 1200.0114
LEU 1210.0139
LEU 1220.0108
ASP 1230.0111
PHE 1240.0098
LYS 1250.0095
ASP 1260.0043
LYS 1270.0031
SER 1280.0133
ALA 1290.0202
GLU 1300.0336
ASP 1310.0271
ALA 1320.0272
LYS 1330.0282
ALA 1340.0122
ILE 1350.0039
TYR 1360.0125
ASP 1370.0144
PHE 1380.0120
THR 1390.0139
ASP 1400.0175
THR 1410.0172
VAL 1420.0184
ILE 1430.0170
ARG 1440.0167
ILE 1450.0153
ARG 1460.0144
ASN 1470.0133
ARG 1480.0103
HIS 1490.0060
ASN 1500.0062
ASP 1510.0065
VAL 1520.0064
ILE 1530.0089
PRO 1540.0081
THR 1550.0086
MET 1560.0083
ALA 1570.0081
GLN 1580.0076
GLY 1590.0082
VAL 1600.0069
ILE 1610.0062
GLU 1620.0071
TYR 1630.0053
LYS 1640.0054
GLU 1650.0070
SER 1660.0119
PHE 1670.0113
ASP 1700.0259
PRO 1710.0220
VAL 1720.0083
THR 1730.0036
SER 1740.0077
GLN 1750.0118
ASN 1760.0076
VAL 1770.0052
GLN 1780.0078
TYR 1790.0076
PHE 1800.0074
LEU 1810.0081
ASP 1820.0095
ARG 1830.0077
PHE 1840.0072
TYR 1850.0083
MET 1860.0071
SER 1870.0071
ARG 1880.0080
ILE 1890.0072
SER 1900.0109
ILE 1910.0134
ARG 1920.0123
MET 1930.0101
LEU 1940.0169
LEU 1950.0159
ASN 1960.0121
GLN 1970.0101
HIS 1980.0148
SER 1990.0144
LEU 2000.0071
LEU 2010.0075
PHE 2020.0097
GLY 2030.0103
HIS 2150.0229
ILE 2160.0155
GLY 2170.0042
SER 2180.0068
ILE 2190.0115
ASN 2200.0200
PRO 2210.0240
ASN 2220.0283
CYS 2230.0189
ASN 2240.0183
VAL 2250.0128
LEU 2260.0106
GLU 2270.0098
VAL 2280.0084
ILE 2290.0018
LYS 2300.0009
ASP 2310.0032
GLY 2320.0030
TYR 2330.0078
GLU 2340.0100
ASN 2350.0073
ALA 2360.0094
ARG 2370.0148
ARG 2380.0152
LEU 2390.0127
CYS 2400.0171
ASP 2410.0189
LEU 2420.0170
TYR 2430.0164
TYR 2440.0224
ILE 2450.0242
ASN 2460.0265
SER 2470.0212
PRO 2480.0184
GLU 2490.0148
LEU 2500.0131
GLU 2510.0109
LEU 2520.0058
GLU 2530.0081
GLU 2540.0074
LEU 2550.0147
ASN 2560.0124
ALA 2570.0220
LYS 2580.0215
SER 2590.0212
PRO 2600.0228
GLY 2610.0286
GLN 2620.0277
PRO 2630.0210
ILE 2640.0178
GLN 2650.0199
VAL 2660.0178
VAL 2670.0194
TYR 2680.0136
VAL 2690.0107
PRO 2700.0144
SER 2710.0126
HIS 2720.0111
LEU 2730.0094
TYR 2740.0090
HIS 2750.0097
HIS 2750.0097
MET 2760.0099
VAL 2770.0046
PHE 2780.0029
GLU 2790.0028
LEU 2800.0045
PHE 2810.0084
LYS 2820.0077
ASN 2830.0121
ALA 2840.0154
MET 2850.0171
ARG 2860.0181
ALA 2870.0201
THR 2880.0187
MET 2890.0248
GLU 2900.0230
HIS 2910.0143
HIS 2920.0141
ALA 2930.0582
ASN 2940.0862
ARG 2950.0603
GLY 2960.0510
VAL 2970.0143
TYR 2980.0148
PRO 2990.0125
PRO 3000.0154
ILE 3010.0125
GLN 3020.0134
VAL 3030.0052
HIS 3040.0067
VAL 3050.0122
THR 3060.0129
LEU 3070.0213
GLY 3080.0298
ASN 3090.0625
GLU 3100.0455
ASP 3110.0275
LEU 3120.0218
THR 3130.0121
VAL 3140.0115
LYS 3150.0063
MET 3160.0067
SER 3170.0139
ASP 3180.0150
ARG 3190.0151
GLY 3200.0153
GLY 3210.0209
GLY 3220.0213
VAL 3230.0226
PRO 3240.0241
LEU 3250.0196
ARG 3260.0102
LYS 3270.0074
ILE 3280.0045
ASP 3290.0110
ARG 3300.0125
LEU 3310.0067
PHE 3320.0103
ASN 3330.0084
TYR 3340.0082
MET 3350.0047
TYR 3360.0061
SER 3370.0060
THR 3380.0058
ALA 3390.0023
PRO 3400.0060
ARG 3410.0066
PRO 3420.0124
ARG 3430.0203
VAL 3440.0252
GLU 3450.0241
THR 3460.0223
SER 3470.0331
ARG 3480.0333
ALA 3490.0132
VAL 3500.0099
PRO 3510.0127
LEU 3520.0128
ALA 3530.0118
GLY 3540.0048
PHE 3550.0033
GLY 3560.0063
TYR 3570.0084
GLY 3580.0087
LEU 3590.0077
PRO 3600.0105
ILE 3610.0109
SER 3620.0103
ARG 3630.0115
LEU 3640.0108
TYR 3650.0110
ALA 3660.0113
GLN 3670.0101
TYR 3680.0063
PHE 3690.0058
GLN 3700.0082
GLY 3710.0123
ASP 3720.0146
LEU 3730.0135
LYS 3740.0141
LEU 3750.0080
TYR 3760.0114
TYR 3760.0121
SER 3770.0172
LEU 3780.0243
GLU 3790.0334
GLY 3800.0274
TYR 3810.0217
GLY 3820.0183
THR 3830.0141
ASP 3840.0123
ALA 3850.0063
VAL 3860.0091
ILE 3870.0134
TYR 3880.0146
ILE 3890.0185
LYS 3900.0181
ALA 3910.0268
LEU 3920.0274
SER 3930.0259
THR 3940.0277
ASP 3950.0202
SER 3960.0129
ILE 3970.0093
GLU 3980.0069
ARG 3990.0060
LEU 4000.0105
PRO 4010.0089
VAL 4020.0083
TYR 4030.0089
ASN 4040.0100
LYS 4050.0191
ALA 4060.0151
ALA 4070.0097
TRP 4080.0124
LYS 4090.0131
HIS 4100.0074
TYR 4110.0109
ASN 4120.0177
THR 4130.0215
ASN 4140.0303
ALA 4170.0019
ASP 4180.0017
ASP 4190.0019
TRP 4200.0020
CYS 4210.0029
VAL 4220.0022
PRO 4230.0007

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: december 26th, 2025.