CNRS Nantes University US2B US2B
home |  start a new run |  job status |  references&downloads |  examples |  help  

Should you encounter any unexpected behaviour,
please let us know.
elNémo has been hacked on november 27th.
It has been moved away and runs again.
**Still some additional cleaning from time to time**
Sorry for the inconvenience.


***  PDHK1 and DCA  ***

<R2> analysis for 2604162351172680512

---  normal mode 43  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.1614
GLY 410.1614
VAL 420.0886
PRO 430.0973
GLY 440.0799
GLN 450.0380
VAL 460.0278
ASP 470.0381
PHE 480.0239
TYR 490.0070
ALA 500.0152
ARG 510.0203
PHE 520.0134
SER 530.0103
PRO 540.0105
SER 550.0112
PRO 560.0132
LEU 570.0125
SER 580.0126
MET 590.0115
LYS 600.0119
GLN 610.0118
PHE 620.0087
LEU 630.0081
ASP 640.0134
PHE 650.0059
GLY 660.0050
SER 670.0267
CYS 710.0093
GLU 720.0093
LYS 730.0090
THR 740.0083
SER 750.0098
PHE 760.0087
MET 770.0108
PHE 780.0114
LEU 790.0116
ARG 800.0098
GLN 810.0090
GLU 820.0096
LEU 830.0077
PRO 840.0043
VAL 850.0051
ARG 860.0081
LEU 870.0076
ALA 880.0086
ASN 890.0136
ILE 900.0131
MET 910.0136
LYS 920.0212
GLU 930.0148
ILE 940.0134
SER 950.0171
LEU 960.0174
LEU 970.0122
PRO 980.0068
ASP 990.0075
ASN 1000.0109
LEU 1010.0111
LEU 1020.0124
ARG 1030.0158
THR 1040.0174
PRO 1050.0182
SER 1060.0183
VAL 1070.0170
GLN 1080.0168
LEU 1090.0167
VAL 1100.0156
GLN 1110.0117
SER 1120.0128
TRP 1130.0139
TYR 1140.0084
ILE 1150.0082
GLN 1160.0135
SER 1170.0133
LEU 1180.0106
GLN 1190.0149
GLU 1200.0161
LEU 1210.0139
LEU 1220.0141
ASP 1230.0079
PHE 1240.0099
LYS 1250.0107
ASP 1260.0214
LYS 1270.0219
SER 1280.0204
ALA 1290.0145
GLU 1300.0128
ASP 1310.0218
ALA 1320.0255
LYS 1330.0360
ALA 1340.0208
ILE 1350.0098
TYR 1360.0206
ASP 1370.0142
PHE 1380.0072
THR 1390.0077
ASP 1400.0072
THR 1410.0103
VAL 1420.0115
ILE 1430.0121
ARG 1440.0147
ILE 1450.0143
ARG 1460.0139
ASN 1470.0163
ARG 1480.0178
HIS 1490.0164
ASN 1500.0166
ASP 1510.0190
VAL 1520.0143
ILE 1530.0131
PRO 1540.0157
THR 1550.0180
MET 1560.0142
ALA 1570.0134
GLN 1580.0142
GLY 1590.0146
VAL 1600.0108
ILE 1610.0142
GLU 1620.0161
TYR 1630.0129
LYS 1640.0114
GLU 1650.0208
SER 1660.0274
PHE 1670.0208
ASP 1700.0147
PRO 1710.0101
VAL 1720.0134
THR 1730.0085
SER 1740.0059
GLN 1750.0137
ASN 1760.0143
VAL 1770.0139
GLN 1780.0122
TYR 1790.0121
PHE 1800.0135
LEU 1810.0133
ASP 1820.0113
ARG 1830.0112
PHE 1840.0107
TYR 1850.0112
MET 1860.0071
SER 1870.0069
ARG 1880.0046
ILE 1890.0044
SER 1900.0055
ILE 1910.0058
ARG 1920.0057
MET 1930.0032
LEU 1940.0071
LEU 1950.0072
ASN 1960.0052
GLN 1970.0043
HIS 1980.0068
SER 1990.0078
LEU 2000.0063
LEU 2010.0049
PHE 2020.0064
GLY 2030.0078
HIS 2150.0125
ILE 2160.0083
GLY 2170.0066
SER 2180.0085
ILE 2190.0090
ASN 2200.0109
PRO 2210.0087
ASN 2220.0119
CYS 2230.0146
ASN 2240.0144
VAL 2250.0149
LEU 2260.0138
GLU 2270.0157
VAL 2280.0165
ILE 2290.0134
LYS 2300.0129
ASP 2310.0130
GLY 2320.0122
TYR 2330.0113
GLU 2340.0121
ASN 2350.0119
ALA 2360.0111
ARG 2370.0117
ARG 2380.0113
LEU 2390.0081
CYS 2400.0128
ASP 2410.0101
LEU 2420.0122
TYR 2430.0154
TYR 2440.0178
ILE 2450.0152
ASN 2460.0144
SER 2470.0152
PRO 2480.0148
GLU 2490.0128
LEU 2500.0098
GLU 2510.0067
LEU 2520.0051
GLU 2530.0046
GLU 2540.0079
LEU 2550.0161
ASN 2560.0138
ALA 2570.0218
LYS 2580.0180
SER 2590.0216
PRO 2600.0276
GLY 2610.0297
GLN 2620.0196
PRO 2630.0032
ILE 2640.0082
GLN 2650.0110
VAL 2660.0128
VAL 2670.0108
TYR 2680.0123
VAL 2690.0132
PRO 2700.0161
SER 2710.0138
HIS 2720.0124
LEU 2730.0146
TYR 2740.0139
HIS 2750.0096
HIS 2750.0096
MET 2760.0098
VAL 2770.0118
PHE 2780.0105
GLU 2790.0070
LEU 2800.0084
PHE 2810.0117
LYS 2820.0105
ASN 2830.0139
ALA 2840.0147
MET 2850.0162
ARG 2860.0185
ALA 2870.0178
THR 2880.0166
MET 2890.0203
GLU 2900.0197
HIS 2910.0095
HIS 2920.0090
ALA 2930.0424
ASN 2940.0625
ARG 2950.0384
GLY 2960.0327
VAL 2970.0081
TYR 2980.0155
PRO 2990.0149
PRO 3000.0146
ILE 3010.0095
GLN 3020.0096
VAL 3030.0053
HIS 3040.0049
VAL 3050.0145
THR 3060.0153
LEU 3070.0168
GLY 3080.0203
ASN 3090.0241
GLU 3100.0243
ASP 3110.0200
LEU 3120.0186
THR 3130.0148
VAL 3140.0139
LYS 3150.0022
MET 3160.0009
SER 3170.0095
ASP 3180.0117
ARG 3190.0127
GLY 3200.0105
GLY 3210.0072
GLY 3220.0068
VAL 3230.0070
PRO 3240.0103
LEU 3250.0130
ARG 3260.0115
LYS 3270.0075
ILE 3280.0078
ASP 3290.0059
ARG 3300.0046
LEU 3310.0045
PHE 3320.0034
ASN 3330.0068
TYR 3340.0068
MET 3350.0049
TYR 3360.0034
SER 3370.0061
THR 3380.0068
ALA 3390.0082
PRO 3400.0079
ARG 3410.0073
PRO 3420.0223
ARG 3430.0567
VAL 3440.0379
GLU 3450.0353
THR 3460.0118
SER 3470.0401
ARG 3480.0386
ALA 3490.0212
VAL 3500.0167
PRO 3510.0170
LEU 3520.0161
ALA 3530.0165
GLY 3540.0084
PHE 3550.0070
GLY 3560.0067
TYR 3570.0044
GLY 3580.0031
LEU 3590.0011
PRO 3600.0018
ILE 3610.0018
SER 3620.0059
ARG 3630.0060
LEU 3640.0046
TYR 3650.0087
ALA 3660.0090
GLN 3670.0083
TYR 3680.0078
PHE 3690.0116
GLN 3700.0128
GLY 3710.0121
ASP 3720.0100
LEU 3730.0076
LYS 3740.0060
LEU 3750.0043
TYR 3760.0063
TYR 3760.0064
SER 3770.0090
LEU 3780.0122
GLU 3790.0090
GLY 3800.0072
TYR 3810.0108
GLY 3820.0100
THR 3830.0081
ASP 3840.0061
ALA 3850.0047
VAL 3860.0057
ILE 3870.0124
TYR 3880.0132
ILE 3890.0184
LYS 3900.0170
ALA 3910.0171
LEU 3920.0137
SER 3930.0130
THR 3940.0150
ASP 3950.0160
SER 3960.0140
ILE 3970.0121
GLU 3980.0114
ARG 3990.0107
LEU 4000.0101
PRO 4010.0124
VAL 4020.0119
TYR 4030.0169
ASN 4040.0153
LYS 4050.0236
ALA 4060.0149
ALA 4070.0125
TRP 4080.0225
LYS 4090.0272
HIS 4100.0193
TYR 4110.0196
ASN 4120.0253
THR 4130.0200
ASN 4140.0243
ALA 4170.0177
ASP 4180.0094
ASP 4190.0178
TRP 4200.0101
CYS 4210.0067
VAL 4220.0156
PRO 4230.0052

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: december 26th, 2025.